RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 PKDCCQ504Y2 493 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 RTP2Q5QGT7 225 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 ACAD10Q6JQN1 1059 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 RAD9BQ6WBX8 426 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 ZNF662Q6ZS27 426 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 TAS1R1Q7RTX1 841 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 SPATA2LQ8IUW3 424 aaPredicted RBP11.31□□□□□ -0.6
RTF1-202ENST00000462276 FUKQ8N0W3 1084 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 C12orf29Q8N999 325 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 FBXO22Q8NEZ5 403 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 OR10T2Q8NGX3 314 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 SPPL3Q8TCT6 385 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 SPPL2BQ8TCT7 592 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 SLC20A1Q8WUM9 679 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 SMARCD1Q96GM5 515 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 PCED1BQ96HM7 432 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 HSFY1Q96LI6 401 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 VN1R3Q9BXE9 311 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 EMILIN2Q9BXX0 1053 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 DUSP16Q9BY84 665 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 PBX4Q9BYU1 374 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 ZBP1Q9H171 429 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 ISCUQ9H1K1 167 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 KCNF1Q9H3M0 494 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 DPEP3Q9H4B8 488 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 PNPLA8Q9NP80 782 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 CRTAC1Q9NQ79 661 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 KCND1Q9NSA2 647 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 SEPT11Q9NVA2 429 aaKnown RBP11.31□□□□□ -0.6
RTF1-202ENST00000462276 GTF3C4Q9UKN8 822 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 TSPAN16Q9UKR8 245 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 NME7Q9Y5B8 376 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 PCDHB5Q9Y5E4 795 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 MYBPHLA2RUH7 354 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 ANKRD62A6NC57 917 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 H3BNC9 293 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 MICAL2O94851 1124 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 CXCL14O95715 111 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 H2AFZP0C0S5 128 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 NPR3P17342 541 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 ACAT1P24752 427 aaKnown RBP11.3□□□□□ -0.6
RTF1-202ENST00000462276 GPD2P43304 727 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 MAGEA1P43355 309 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 TUFMP49411 452 aaKnown RBP11.3□□□□□ -0.6
RTF1-202ENST00000462276 NDUFV1P49821 464 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 PSMC1P62191 440 aaKnown RBP11.3□□□□□ -0.6
RTF1-202ENST00000462276 NOMO3P69849 1222 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 CENPCQ03188 943 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 BST2Q10589 180 aaKnown RBP11.3□□□□□ -0.6
RTF1-202ENST00000462276 SMC1AQ14683 1233 aaKnown RBP11.3□□□□□ -0.6
RTF1-202ENST00000462276 LRIT3Q3SXY7 679 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 MDH1BQ5I0G3 518 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 CCDC122Q5T0U0 273 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 PPP1R26Q5T8A7 1209 aaPredicted RBP11.3□□□□□ -0.6
RTF1-202ENST00000462276 TAF3Q5VWG9 929 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 FAM109BQ6ICB4 259 aaPredicted RBP11.3□□□□□ -0.6
RTF1-202ENST00000462276 H2AFVQ71UI9 128 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 TMC7Q7Z402 723 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 PHF13Q86YI8 300 aaPredicted RBP11.3□□□□□ -0.6
RTF1-202ENST00000462276 MRPL43Q8N983 215 aaKnown RBP11.3□□□□□ -0.6
RTF1-202ENST00000462276 ZNF461Q8TAF7 563 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 SLC2A14Q8TDB8 520 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 SLC35F5Q8WV83 523 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 UBE2Q2Q8WVN8 375 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 ZSWIM1Q9BR11 485 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 MED10Q9BTT4 135 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 B3GNT5Q9BYG0 378 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 TSGA10Q9BZW7 698 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 CSNK1G1Q9HCP0 422 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 ACP6Q9NPH0 428 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 TLR9Q9NR96 1032 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 WDR35Q9P2L0 1181 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 AFF4Q9UHB7 1163 aaKnown RBP11.3□□□□□ -0.6
RTF1-202ENST00000462276 DPP7Q9UHL4 492 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 STRIP2Q9ULQ0 834 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 NENFQ9UMX5 172 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 ADGRG1Q9Y653 693 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 TRIOBPQ9H2D6 2365 aa11.3□□□□□ -0.6
RTF1-202ENST00000462276 LAMA3Q16787 3333 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 TMEM265A0A087WTH1 108 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 M0QYV0 167 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 XPO1O14980 1071 aaKnown RBP11.29□□□□□ -0.6
RTF1-202ENST00000462276 TRIM66O15016 1216 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 ATP2C2O75185 946 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 ABLIM3O94929 683 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 FTLP02792 175 aaPredicted RBP11.29□□□□□ -0.6
RTF1-202ENST00000462276 CALB1P05937 261 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 ADH1AP07327 375 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 CPB1P15086 417 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 MYOGP15173 224 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 MMP8P22894 467 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 PLA2G4AP47712 749 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 RPL34P49207 117 aaKnown RBP11.29□□□□□ -0.6
RTF1-202ENST00000462276 RPL10AP62906 217 aaKnown RBP11.29□□□□□ -0.6
RTF1-202ENST00000462276 CYP27A1Q02318 531 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 GFPT1Q06210 699 aaPredicted RBP11.29□□□□□ -0.6
RTF1-202ENST00000462276 KIF5AQ12840 1032 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 ORC1Q13415 861 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 PTPN14Q15678 1187 aa11.29□□□□□ -0.6
RTF1-202ENST00000462276 GOLGA7BQ2TAP0 167 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms