RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 IFNB1P01574 187 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 CYP1A1P04798 512 aaPredicted RBP4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 CPB1P15086 417 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 GBP1P32455 592 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 CDR1P51861 262 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 LILRA4P59901 499 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 ADAM17P78536 824 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 MRPS25P82663 173 aaKnown RBP4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 SLC7A5Q01650 507 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 DR1Q01658 176 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 LMNB2Q03252 620 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 IFFO1Q0D2I5 559 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 TFDP2Q14188 446 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 MDH1BQ5I0G3 518 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 UBXN11Q5T124 520 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 DPY19L2P1Q6NXN4 242 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 FBXO38Q6PIJ6 1188 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 LCLAT1Q6UWP7 414 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 C4orf50Q6ZRC1 276 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 RPAINQ86UA6 219 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 ECHDC2Q86YB7 292 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 DCP1BQ8IZD4 617 aaKnown RBP4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 SLC4A11Q8NBS3 891 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 B3GALNT2Q8NCR0 500 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 SLC2A14Q8TDB8 520 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 HSPH1Q92598 858 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 LRRC45Q96CN5 670 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 HINFPQ9BQA5 517 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 CNPY3Q9BT09 278 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 TRIM62Q9BVG3 475 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 HEMGNQ9BXL5 484 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 EPC1Q9H2F5 836 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 CENPHQ9H3R5 247 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 EPB41L5Q9HCM4 733 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 KRT82Q9NSB4 513 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 ZNF148Q9UQR1 794 aa4.34□□□□□ -1.72
ATP13A3-206ENST00000461660 TRPM7Q96QT4 1865 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 PARP14Q460N5 1801 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 TARSL2A2RTX5 802 aaKnown RBP4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 E5RJQ4 531 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 PI4K2BG5E9Z4 385 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 PPEF2O14830 753 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 ZNF623O75123 536 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 UNGP13051 313 aaPredicted RBP4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 CCDC130P13994 396 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 RAG1P15918 1043 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 PTPN1P18031 435 aaKnown RBP4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 CHRNA3P32297 505 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 ARL4AP40617 200 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 VPS41P49754 854 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 ZNF132P52740 706 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 HADHBP55084 474 aaKnown RBP4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 DYNLT1P63172 113 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 TLE2Q04725 743 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 YWHAHQ04917 246 aaPredicted RBP4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 ELAVL2Q12926 359 aaKnown RBP4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 MAMLD1Q13495 774 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 SNX1Q13596 522 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 NFE2Q16621 373 aaPredicted RBP4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 PTPN20Q4JDL3 420 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 EFHC1Q5JVL4 640 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 CFAP58Q5T655 872 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 FAM117BQ6P1L5 589 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 MON1BQ7L1V2 547 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 CCDC25Q86WR0 208 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 CREG2Q8IUH2 290 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 RCOR2Q8IZ40 523 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 MMGT1Q8N4V1 131 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 EMC1Q8N766 993 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 CCDC89Q8N998 374 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 C12orf29Q8N999 325 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 LRRC57Q8N9N7 239 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 SMG8Q8ND04 991 aaKnown RBP4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 LRRN4CLQ8ND94 238 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 DBF4BQ8NFT6 615 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 ACTRT1Q8TDG2 376 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 DDX1Q92499 740 aaKnown RBP4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 ZBED2Q9BTP6 218 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 OSBPL8Q9BZF1 889 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 NACA2Q9H009 215 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 SDCBP2Q9H190 292 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 KLHL11Q9NVR0 708 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 L1RE1Q9UN81 338 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 PHF24Q9UPV7 400 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 PTPN22Q9Y2R2 807 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 TBKBP1A7MCY6 615 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 I3L4J1 428 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 MCF2LO15068 1137 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 MTA2O94776 668 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 GJB6O95452 261 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 EOMESO95936 686 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 ALDH2P05091 517 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 ATF2P15336 505 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 CLCN6P51797 869 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 ITIH3Q06033 890 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 INCA1Q0VD86 236 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 HIC1Q14526 733 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 MTFR1Q15390 333 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 PPP6R3Q5H9R7 873 aaPredicted RBP4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 PLEKHA7Q6IQ23 1121 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms