RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 TRIM7Q9C029 511 aa7.18□□□□□ -1.26
MSH2-204ENST00000461394 LHX5Q9H2C1 402 aa7.18□□□□□ -1.26
MSH2-204ENST00000461394 SLITRK6Q9H5Y7 841 aa7.18□□□□□ -1.26
MSH2-204ENST00000461394 FAM124BQ9H5Z6 455 aaPredicted RBP7.18□□□□□ -1.26
MSH2-204ENST00000461394 OGFRQ9NZT2 677 aa7.18□□□□□ -1.26
MSH2-204ENST00000461394 WDR35Q9P2L0 1181 aa7.18□□□□□ -1.26
MSH2-204ENST00000461394 TSPAN16Q9UKR8 245 aa7.18□□□□□ -1.26
MSH2-204ENST00000461394 PADI3Q9ULW8 664 aa7.18□□□□□ -1.26
MSH2-204ENST00000461394 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.18□□□□□ -1.26
MSH2-204ENST00000461394 UTP11Q9Y3A2 253 aaKnown RBP7.18□□□□□ -1.26
MSH2-204ENST00000461394 TRIM17Q9Y577 477 aa7.18□□□□□ -1.26
MSH2-204ENST00000461394 PCDHA3Q9Y5H8 950 aa7.18□□□□□ -1.26
MSH2-204ENST00000461394 A0A1W2PQ45 241 aaPredicted RBP7.17□□□□□ -1.26
MSH2-204ENST00000461394 A0A1W2PQY0 241 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 O00370 1275 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 PIRO00625 290 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 CYB561D2O14569 222 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 ATP8B1O43520 1251 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 GALR2O43603 387 aaPredicted RBP7.17□□□□□ -1.26
MSH2-204ENST00000461394 PHF2O75151 1096 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 ERBB2P04626 1255 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 PYGMP11217 842 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 SKIP12755 728 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 CDH5P33151 784 aaPredicted RBP7.17□□□□□ -1.26
MSH2-204ENST00000461394 MAN1A1P33908 653 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 SCNN1GP51170 649 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 EPHB4P54760 987 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 SLC8A3P57103 927 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 RPL7AP62424 266 aaKnown RBP7.17□□□□□ -1.26
MSH2-204ENST00000461394 FAM193AP78312 1265 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 CBX1P83916 185 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 DR1Q01658 176 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 SOX4Q06945 474 aaPredicted RBP7.17□□□□□ -1.26
MSH2-204ENST00000461394 PTP4A2Q12974 167 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 PDCLQ13371 301 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 PIGHQ14442 188 aaPredicted RBP7.17□□□□□ -1.26
MSH2-204ENST00000461394 ZNF268Q14587 947 aaPredicted RBP7.17□□□□□ -1.26
MSH2-204ENST00000461394 ZBTB6Q15916 424 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 HADHQ16836 314 aaKnown RBP7.17□□□□□ -1.26
MSH2-204ENST00000461394 PTPN20Q4JDL3 420 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 HSP90B2PQ58FF3 399 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 C6orf132Q5T0Z8 1188 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 ZNF618Q5T7W0 954 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 PPP1R26Q5T8A7 1209 aaPredicted RBP7.17□□□□□ -1.26
MSH2-204ENST00000461394 DAB2IPQ5VWQ8 1189 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 KAZNQ674X7 775 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 LCLAT1Q6UWP7 414 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 CCNI2Q6ZMN8 369 aaPredicted RBP7.17□□□□□ -1.26
MSH2-204ENST00000461394 UNC93AQ86WB7 457 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 SLC13A5Q86YT5 568 aaPredicted RBP7.17□□□□□ -1.26
MSH2-204ENST00000461394 KRT222Q8N1A0 295 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 WDTC1Q8N5D0 677 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 C12orf29Q8N999 325 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 C3orf20Q8ND61 904 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 CXorf38Q8TB03 319 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 HNRNPLLQ8WVV9 542 aaKnown RBP7.17□□□□□ -1.26
MSH2-204ENST00000461394 ZBTB9Q96C00 473 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 RBM41Q96IZ5 413 aaKnown RBP7.17□□□□□ -1.26
MSH2-204ENST00000461394 TNIP3Q96KP6 325 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 CCDC114Q96M63 670 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 ZFP42Q96MM3 310 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 GDAP1L1Q96MZ0 367 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 RUNDC3BQ96NL0 473 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 CPXM1Q96SM3 734 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 RUFY1Q96T51 708 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 ADAM2Q99965 735 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 TSEN34Q9BSV6 310 aaKnown RBP7.17□□□□□ -1.26
MSH2-204ENST00000461394 CFHR5Q9BXR6 569 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 TRIM31Q9BZY9 425 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.17□□□□□ -1.26
MSH2-204ENST00000461394 RAB17Q9H0T7 212 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 TRPV6Q9H1D0 765 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 DPH5Q9H2P9 285 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 DPEP3Q9H4B8 488 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 ZWILCHQ9H900 591 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 RSAD1Q9HA92 442 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 ERVK-5Q9HDB9 667 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 KLHL11Q9NVR0 708 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 ZNF446Q9NWS9 450 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 AMACRQ9UHK6 382 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 DMGDHQ9UI17 866 aaKnown RBP7.17□□□□□ -1.26
MSH2-204ENST00000461394 TTC7AQ9ULT0 858 aaPredicted RBP7.17□□□□□ -1.26
MSH2-204ENST00000461394 GIT1Q9Y2X7 761 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 PTCH2Q9Y6C5 1203 aa7.17□□□□□ -1.26
MSH2-204ENST00000461394 UTRNP46939 3433 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 ESYT3A0FGR9 886 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 TMEM191CA6NGB0 347 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 ARL5CA6NH57 179 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 CASTOR2A6NHX0 329 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 SIGLEC16A6NMB1 481 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 E5RJQ4 531 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 PI4K2BG5E9Z4 385 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 PODXLO00592 558 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 PTGESO14684 152 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 TTI1O43156 1089 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 SART1O43290 800 aaKnown RBP7.16□□□□□ -1.26
MSH2-204ENST00000461394 RNF8O76064 485 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 ZRANB2O95218 330 aaKnown RBP eCLIP7.16□□□□□ -1.26
MSH2-204ENST00000461394 POMCP01189 267 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 GLI1P08151 1106 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 202.8 ms