RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 CDH9Q9ULB4 789 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 KANSL1LA0AUZ9 987 aa16.44■□□□□ 0.22
VARS-219ENST00000461328 HEPACAM2A8MVW5 462 aa16.44■□□□□ 0.22
VARS-219ENST00000461328 GABRDO14764 452 aa16.44■□□□□ 0.22
VARS-219ENST00000461328 PSMA7O14818 248 aa16.44■□□□□ 0.22
VARS-219ENST00000461328 STAU1O95793 577 aaKnown RBP16.44■□□□□ 0.22
VARS-219ENST00000461328 P4HA1P13674 534 aa16.44■□□□□ 0.22
VARS-219ENST00000461328 PSMC3P17980 439 aa16.44■□□□□ 0.22
VARS-219ENST00000461328 RPL10AP62906 217 aaKnown RBP16.44■□□□□ 0.22
VARS-219ENST00000461328 CLDN10P78369 228 aa16.44■□□□□ 0.22
VARS-219ENST00000461328 ANGPT1Q15389 498 aa16.44■□□□□ 0.22
VARS-219ENST00000461328 CCDC142Q17RM4 750 aa16.44■□□□□ 0.22
VARS-219ENST00000461328 C4orf50Q6ZRC1 276 aa16.44■□□□□ 0.22
VARS-219ENST00000461328 YAF2Q8IY57 180 aa16.44■□□□□ 0.22
VARS-219ENST00000461328 ELOA2Q8IYF1 753 aaPredicted RBP16.44■□□□□ 0.22
VARS-219ENST00000461328 SPATA20Q8TB22 786 aa16.44■□□□□ 0.22
VARS-219ENST00000461328 DNASE1L2Q92874 299 aa16.44■□□□□ 0.22
VARS-219ENST00000461328 IRF7Q92985 503 aa16.44■□□□□ 0.22
VARS-219ENST00000461328 MRPL45Q9BRJ2 306 aaKnown RBP16.44■□□□□ 0.22
VARS-219ENST00000461328 IMPG2Q9BZV3 1241 aa16.44■□□□□ 0.22
VARS-219ENST00000461328 SMYD3Q9H7B4 428 aa16.44■□□□□ 0.22
VARS-219ENST00000461328 ABCB6Q9NP58 842 aa16.44■□□□□ 0.22
VARS-219ENST00000461328 HEBP1Q9NRV9 189 aa16.44■□□□□ 0.22
VARS-219ENST00000461328 BIN1O00499 593 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 IKBKBO14920 756 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 ZNF263O14978 683 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 C4BPAP04003 597 aaKnown RBP16.43■□□□□ 0.22
VARS-219ENST00000461328 CSH1P0DML2 217 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 CSH2P0DML3 217 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 CYP2F1P24903 491 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 LMO2P25791 158 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 GNL1P36915 607 aaPredicted RBP16.43■□□□□ 0.22
VARS-219ENST00000461328 GCLMP48507 274 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 GPR15P49685 360 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 CYP4F8P98187 520 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 CYP27A1Q02318 531 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 MAPRE1Q15691 268 aaKnown RBP16.43■□□□□ 0.22
VARS-219ENST00000461328 ZACNQ401N2 412 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 COBLL1Q53SF7 1204 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 KLHL10Q6JEL2 608 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 SV2AQ7L0J3 742 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 GPIHBP1Q8IV16 184 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 ARID3BQ8IVW6 561 aaPredicted RBP16.43■□□□□ 0.22
VARS-219ENST00000461328 MFSD6LQ8IWD5 586 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 SCN4BQ8IWT1 228 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 MYLPFQ96A32 169 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 PKMYT1Q99640 499 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 MKNK1Q9BUB5 465 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 DDX23Q9BUQ8 820 aaKnown RBP16.43■□□□□ 0.22
VARS-219ENST00000461328 XYLT2Q9H1B5 865 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 IL21Q9HBE4 155 aa16.43■□□□□ 0.22
VARS-219ENST00000461328 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.43■□□□□ 0.227e-7■■■■□ 22.9
VARS-219ENST00000461328 MAGED2Q9UNF1 606 aaPredicted RBP16.43■□□□□ 0.22
VARS-219ENST00000461328 MYBPHLA2RUH7 354 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 FAM170BA6NMN3 283 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 A8MXQ7 604 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 DPYSL4O14531 572 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 ATP2C2O75185 946 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 LRRN2O75325 713 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 TACC1O75410 805 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 VNN1O95497 513 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 HLA-DRAP01903 254 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 CD72P21854 359 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 PPP1R2P41236 205 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 RAP1GAPP47736 663 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 DDR2Q16832 855 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 SGSM1Q2NKQ1 1148 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 DCAF17Q5H9S7 520 aaPredicted RBP16.42■□□□□ 0.22
VARS-219ENST00000461328 MDH1BQ5I0G3 518 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 SDHAF4Q5VUM1 108 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 TCERG1LQ5VWI1 586 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 ZNF852Q6ZMS4 543 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 LIMS2Q7Z4I7 341 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 ADSSL1Q8N142 457 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 CCDC150Q8NCX0 1101 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 STKLD1Q8NE28 680 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 ELMO3Q96BJ8 720 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 RSPRY1Q96DX4 576 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 FUBP3Q96I24 572 aaKnown RBP eCLIP16.42■□□□□ 0.22
VARS-219ENST00000461328 TASP1Q9H6P5 420 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 LTB4R2Q9NPC1 389 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 COL4A3Q01955 1670 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 NCANO14594 1321 aa16.42■□□□□ 0.22
VARS-219ENST00000461328 TRIM49BA6NDI0 452 aa16.41■□□□□ 0.22
VARS-219ENST00000461328 NLRP12P59046 1061 aa16.41■□□□□ 0.22
VARS-219ENST00000461328 FKBP3Q00688 224 aaKnown RBP16.41■□□□□ 0.22
VARS-219ENST00000461328 LRRC63Q05C16 580 aa16.41■□□□□ 0.22
VARS-219ENST00000461328 CFAP221Q4G0U5 840 aa16.41■□□□□ 0.22
VARS-219ENST00000461328 C1orf220Q5T0J3 134 aa16.41■□□□□ 0.22
VARS-219ENST00000461328 ANKRD40Q6AI12 368 aa16.41■□□□□ 0.22
VARS-219ENST00000461328 FAM171BQ6P995 826 aa16.41■□□□□ 0.22
VARS-219ENST00000461328 TAF4BQ92750 862 aa16.41■□□□□ 0.22
VARS-219ENST00000461328 NELL2Q99435 816 aa16.41■□□□□ 0.22
VARS-219ENST00000461328 BCO2Q9BYV7 579 aa16.41■□□□□ 0.22
VARS-219ENST00000461328 OSBPL6Q9BZF3 934 aa16.41■□□□□ 0.22
VARS-219ENST00000461328 VRTNQ9H8Y1 702 aa16.41■□□□□ 0.22
VARS-219ENST00000461328 CRTAC1Q9NQ79 661 aa16.41■□□□□ 0.22
VARS-219ENST00000461328 TRPV5Q9NQA5 729 aa16.41■□□□□ 0.22
VARS-219ENST00000461328 DLGAP2Q9P1A6 1054 aa16.41■□□□□ 0.22
VARS-219ENST00000461328 MAGEC2Q9UBF1 373 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms