RNA–Protein interactions for RNA: ENST00000460810.1

CCDC58-202, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-202ENST00000460810 PARP1P09874 1014 aaKnown RBP4.67□□□□□ -1.66
CCDC58-202ENST00000460810 ITGB6P18564 788 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 SLC7A1P30825 629 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 CXCR5P32302 372 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 ALDH9A1P49189 494 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 SUMO3P55854 103 aaPredicted RBP4.67□□□□□ -1.66
CCDC58-202ENST00000460810 MPP1Q00013 466 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 NHLH2Q02577 135 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 MGAT2Q10469 447 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 TAF5Q15542 800 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 PFKFB4Q16877 469 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 MST1LQ2TV78 715 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 ARL13BQ3SXY8 428 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 MFSD14BQ5SR56 506 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 THEMIS2Q5TEJ8 643 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 EFCAB12Q6NXP0 572 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 FAM180BQ6P0A1 224 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 HEATR3Q7Z4Q2 680 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 SH2D3CQ8N5H7 860 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 ATG16L2Q8NAA4 619 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 RNF169Q8NCN4 708 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 CPEB3Q8NE35 698 aaKnown RBP4.67□□□□□ -1.66
CCDC58-202ENST00000460810 OR7D4Q8NG98 312 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 TRAPPC12Q8WVT3 735 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 TFAP2CQ92754 450 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 CEP95Q96GE4 821 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 ZC3H10Q96K80 434 aaKnown RBP4.67□□□□□ -1.66
CCDC58-202ENST00000460810 RMDN3Q96TC7 470 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 COLEC11Q9BWP8 271 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 SORBS1Q9BX66 1292 aaKnown RBP4.67□□□□□ -1.66
CCDC58-202ENST00000460810 BCO1Q9HAY6 547 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 PNPLA8Q9NP80 782 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 VPS45Q9NRW7 570 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 LMBRD1Q9NUN5 540 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 GGA3Q9NZ52 723 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 CLIC5Q9NZA1 410 aa4.67□□□□□ -1.66
CCDC58-202ENST00000460810 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.67□□□□□ -1.66
CCDC58-202ENST00000460810 ISM1B1AKI9 464 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 SKAP2O75563 359 aaPredicted RBP4.66□□□□□ -1.66
CCDC58-202ENST00000460810 ENDOD1O94919 500 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 MBD4O95243 580 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 CD4P01730 458 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 SPATA31D3P0C874 917 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 TYRP14679 529 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 BRAFP15056 766 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 NPR1P16066 1061 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 MGAT1P26572 445 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 EEF1GP26641 437 aaKnown RBP4.66□□□□□ -1.66
CCDC58-202ENST00000460810 RNASE9P60153 205 aaKnown RBP4.66□□□□□ -1.66
CCDC58-202ENST00000460810 HTRA4P83105 476 aaPredicted RBP4.66□□□□□ -1.66
CCDC58-202ENST00000460810 ZACNQ401N2 412 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 KHDC1Q4VXA5 237 aaKnown RBP4.66□□□□□ -1.66
CCDC58-202ENST00000460810 FAM47AQ5JRC9 791 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 GJC2Q5T442 439 aaPredicted RBP4.66□□□□□ -1.66
CCDC58-202ENST00000460810 RETSATQ6NUM9 610 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 ARMC6Q6NXE6 501 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 JMJD6Q6NYC1 403 aaPredicted RBP4.66□□□□□ -1.66
CCDC58-202ENST00000460810 C16orf54Q6UWD8 224 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 SPATA31D4Q6ZUB0 917 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 TBC1D1Q86TI0 1168 aaPredicted RBP4.66□□□□□ -1.66
CCDC58-202ENST00000460810 RHOT1Q8IXI2 618 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 TRMT2AQ8IZ69 625 aaKnown RBP4.66□□□□□ -1.66
CCDC58-202ENST00000460810 BOLLQ8N9W6 283 aaKnown RBP4.66□□□□□ -1.66
CCDC58-202ENST00000460810 C3orf20Q8ND61 904 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 SLC35B2Q8TB61 432 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 CAGE1Q8TC20 777 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 ERP27Q96DN0 273 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 CLPTM1LQ96KA5 538 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 VRK1Q99986 396 aaPredicted RBP4.66□□□□□ -1.66
CCDC58-202ENST00000460810 C7orf25Q9BPX7 421 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 OSBPL5Q9H0X9 879 aaPredicted RBP4.66□□□□□ -1.66
CCDC58-202ENST00000460810 OBP2BQ9NPH6 170 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 LANCL2Q9NS86 450 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 SMC4Q9NTJ3 1288 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 TMEM140Q9NV12 185 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 PNPOQ9NVS9 261 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 STK32BQ9NY57 414 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 IFT80Q9P2H3 777 aaPredicted RBP4.66□□□□□ -1.66
CCDC58-202ENST00000460810 CPA4Q9UI42 421 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 AJAP1Q9UKB5 411 aaPredicted RBP4.66□□□□□ -1.66
CCDC58-202ENST00000460810 HDAC9Q9UKV0 1011 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 RUVBL1Q9Y265 456 aaKnown RBP4.66□□□□□ -1.66
CCDC58-202ENST00000460810 SLC45A1Q9Y2W3 748 aa4.66□□□□□ -1.66
CCDC58-202ENST00000460810 A6NCN8 305 aa4.65□□□□□ -1.67
CCDC58-202ENST00000460810 TBKBP1A7MCY6 615 aa4.65□□□□□ -1.67
CCDC58-202ENST00000460810 LGALS16A8MUM7 142 aa4.65□□□□□ -1.67
CCDC58-202ENST00000460810 FAM171A2A8MVW0 826 aa4.65□□□□□ -1.67
CCDC58-202ENST00000460810 B5MCH6 92 aa4.65□□□□□ -1.67
CCDC58-202ENST00000460810 TISP43B9A030 160 aa4.65□□□□□ -1.67
CCDC58-202ENST00000460810 B9A039 149 aa4.65□□□□□ -1.67
CCDC58-202ENST00000460810 IFIT1P09914 478 aaKnown RBP4.65□□□□□ -1.67
CCDC58-202ENST00000460810 EGR2P11161 476 aaPredicted RBP4.65□□□□□ -1.67
CCDC58-202ENST00000460810 IL2RBP14784 551 aa4.65□□□□□ -1.67
CCDC58-202ENST00000460810 CAPN3P20807 821 aa4.65□□□□□ -1.67
CCDC58-202ENST00000460810 DDX6P26196 483 aaKnown RBP eCLIP4.65□□□□□ -1.67
CCDC58-202ENST00000460810 SREBF1P36956 1147 aa4.65□□□□□ -1.67
CCDC58-202ENST00000460810 FLT3LGP49771 235 aa4.65□□□□□ -1.67
CCDC58-202ENST00000460810 ITGA8P53708 1063 aa4.65□□□□□ -1.67
CCDC58-202ENST00000460810 ARL4CP56559 192 aa4.65□□□□□ -1.67
CCDC58-202ENST00000460810 TARDBPQ13148 414 aaKnown RBP eCLIP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms