RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 HSPBP1Q9NZL4 362 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 HACL1Q9UJ83 578 aa16.25■□□□□ 0.19
SSR4-206ENST00000460616 A6NJR5 290 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 PMM2O15305 246 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 TM7SF2O76062 418 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 ENO1P06733 434 aaKnown RBP16.24■□□□□ 0.19
SSR4-206ENST00000460616 KRT5P13647 590 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 SHMT1P34896 483 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 TAS2R40P59535 323 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 TFDP1Q14186 410 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 SPATA24Q86W54 205 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 RBM15BQ8NDT2 890 aaKnown RBP16.24■□□□□ 0.19
SSR4-206ENST00000460616 EXD1Q8NHP7 514 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 FBXO27Q8NI29 283 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 DHX38Q92620 1227 aaKnown RBP16.24■□□□□ 0.19
SSR4-206ENST00000460616 CLPTM1LQ96KA5 538 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 THTPAQ9BU02 230 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 FAM237BA0A1B0GVD1 139 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 GOLGA8SH3BPF8 625 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 GOLGA8MH3BSY2 632 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 BANF1O75531 89 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 UNGP13051 313 aaPredicted RBP16.24■□□□□ 0.19
SSR4-206ENST00000460616 SSTR1P30872 391 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 PHBP35232 272 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 EAPPQ56P03 285 aaPredicted RBP16.24■□□□□ 0.19
SSR4-206ENST00000460616 C1orf146Q5VVC0 180 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 FAM91A1Q658Y4 838 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 KAZNQ674X7 775 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 ACAD11Q709F0 780 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 ALYREFQ86V81 257 aaKnown RBP16.24■□□□□ 0.19
SSR4-206ENST00000460616 RASSF3Q86WH2 238 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 RBM12BQ8IXT5 1001 aaKnown RBP16.24■□□□□ 0.19
SSR4-206ENST00000460616 ULK2Q8IYT8 1036 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 PAFAH2Q99487 392 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 ETNK2Q9NVF9 386 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 TMOD2Q9NZR1 351 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 WRAP73Q9P2S5 460 aaPredicted RBP16.24■□□□□ 0.19
SSR4-206ENST00000460616 FETUBQ9UGM5 382 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 PPM1HQ9ULR3 514 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 USTQ9Y2C2 406 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 SCN4AP35499 1836 aa16.24■□□□□ 0.19
SSR4-206ENST00000460616 IGLV3-22A0A075B6J6 115 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 LPXNO60711 386 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 USP1O94782 785 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 CYP3A4P08684 503 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 INHBCP55103 352 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 HNRNPDQ14103 355 aaKnown RBP16.23■□□□□ 0.19
SSR4-206ENST00000460616 RNASEH2BQ5TBB1 312 aaKnown RBP16.23■□□□□ 0.19
SSR4-206ENST00000460616 ANGEL2Q5VTE6 544 aaKnown RBP16.23■□□□□ 0.19
SSR4-206ENST00000460616 DLK2Q6UY11 383 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 C3orf62Q6ZUJ4 267 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 NCAPG2Q86XI2 1143 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 FBXO11Q86XK2 927 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 DAW1Q8N136 415 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 ALLCQ8N6M5 410 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.23■□□□□ 0.19
SSR4-206ENST00000460616 PYROXD1Q8WU10 500 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 ACCSQ96QU6 501 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 ARHGEF35A5YM69 484 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 ZSCAN9O15535 394 aaPredicted RBP16.23■□□□□ 0.19
SSR4-206ENST00000460616 PSMD10O75832 226 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 ASLP04424 464 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 FAM200BP0CF97 657 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 KRT10P13645 584 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 VAV1P15498 845 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 BGNP21810 368 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 MAP3K10Q02779 954 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 MED21Q13503 144 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 SLFN13Q68D06 897 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 CCDC174Q6PII3 467 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 MZB1Q8WU39 189 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 TTC17Q96AE7 1141 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 ELMO3Q96BJ8 720 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 CCDC127Q96BQ5 260 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 TRIM11Q96F44 468 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 NT5C1BQ96P26 610 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 GPAMQ9HCL2 828 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 GGA3Q9NZ52 723 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 SLC7A8Q9UHI5 535 aa16.23■□□□□ 0.19
SSR4-206ENST00000460616 WDR90Q96KV7 1748 aa16.22■□□□□ 0.19
SSR4-206ENST00000460616 GOLGA8IPA6NC78 632 aa16.22■□□□□ 0.19
SSR4-206ENST00000460616 GOLGA8JA6NMD2 632 aa16.22■□□□□ 0.19
SSR4-206ENST00000460616 CAPN14A8MX76 684 aa16.22■□□□□ 0.19
SSR4-206ENST00000460616 MT-ND3P03897 115 aa16.22■□□□□ 0.19
SSR4-206ENST00000460616 HARSP12081 509 aaKnown RBP16.22■□□□□ 0.19
SSR4-206ENST00000460616 USP46P62068 366 aa16.22■□□□□ 0.19
SSR4-206ENST00000460616 KDSRQ06136 332 aa16.22■□□□□ 0.19
SSR4-206ENST00000460616 NFX1Q12986 1120 aaKnown RBP16.22■□□□□ 0.19
SSR4-206ENST00000460616 HIF1AQ16665 826 aa16.22■□□□□ 0.19
SSR4-206ENST00000460616 TMCO4Q5TGY1 634 aa16.22■□□□□ 0.19
SSR4-206ENST00000460616 KRT39Q6A163 491 aa16.22■□□□□ 0.19
SSR4-206ENST00000460616 RAPH1Q70E73 1250 aa16.22■□□□□ 0.19
SSR4-206ENST00000460616 TREML1Q86YW5 311 aa16.22■□□□□ 0.19
SSR4-206ENST00000460616 C12orf56Q8IXR9 622 aa16.22■□□□□ 0.19
SSR4-206ENST00000460616 TMEM174Q8WUU8 243 aa16.22■□□□□ 0.19
SSR4-206ENST00000460616 MTBPQ96DY7 904 aa16.22■□□□□ 0.19
SSR4-206ENST00000460616 PLA2G4CQ9UP65 541 aa16.22■□□□□ 0.19
SSR4-206ENST00000460616 CLUHO75153 1309 aa16.22■□□□□ 0.19
SSR4-206ENST00000460616 BUD23O43709 281 aaKnown RBP16.22■□□□□ 0.19
SSR4-206ENST00000460616 SH2D4BQ5SQS7 431 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms