RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 NOL4O94818 638 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 ABLIM3O94929 683 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 ARHGEF15O94989 841 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 IPO7O95373 1038 aaKnown RBP11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 FGF19O95750 216 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 LRG1P02750 347 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 HNRNPA1P09651 372 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 SETSIPP0DME0 302 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 HOXB8P17481 243 aaPredicted RBP11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 ACO1P21399 889 aaKnown RBP11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 LMO2P25791 158 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 RAD23BP54727 409 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 EPHB3P54753 998 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 MDH1BQ5I0G3 518 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 ARHGAP17Q68EM7 881 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 PLPP6Q8IY26 295 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 TCEAL8Q8IYN2 117 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 DEFB123Q8N688 67 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 CPLX3Q8WVH0 158 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 PCED1BQ96HM7 432 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 B3GALT6Q96L58 329 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 ARID3AQ99856 593 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 VN1R3Q9BXE9 311 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 UBXN6Q9BZV1 441 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 ZNF518BQ9C0D4 1074 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 SDCBP2Q9H190 292 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 CYP4F11Q9HBI6 524 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 PNPLA8Q9NP80 782 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 DMAP1Q9NPF5 467 aaPredicted RBP11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 GTF3C4Q9UKN8 822 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 ASB3Q9Y575 518 aa11.69□□□□□ -0.54
SMNDC1-203ENST00000460483 HIDE1A8MVS5 230 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 CYP26A1O43174 497 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 GFPT2O94808 682 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 LSM8O95777 96 aaKnown RBP11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 SERPING1P05155 500 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 CYP11B1P15538 503 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 ACAT1P24752 427 aaKnown RBP11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 HOXA9P31269 272 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 CASP14P31944 242 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 GRIK1P39086 918 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 ZNF132P52740 706 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 BCAT1P54687 386 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 JAM2P57087 298 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 PSMC1P62191 440 aaKnown RBP11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 ADCY1Q08828 1119 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 KLHL30Q0D2K2 578 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 GRIN2CQ14957 1233 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 DUSP6Q16828 381 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 MGAT5BQ3V5L5 792 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 GJB7Q6PEY0 223 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 LCLAT1Q6UWP7 414 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 PALB2Q86YC2 1186 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 TXLNBQ8N3L3 684 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 UBR7Q8N806 425 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 ANKRD52Q8NB46 1076 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 SLC4A11Q8NBS3 891 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 LEMD2Q8NC56 503 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 TMEM35BQ8NCS4 154 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 KREMEN2Q8NCW0 462 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 OR10T2Q8NGX3 314 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 ZNF606Q8WXB4 792 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 TRIM62Q9BVG3 475 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 TTYH3Q9C0H2 523 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 TTYH1Q9H313 450 aaPredicted RBP11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 DEF6Q9H4E7 631 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 COMMD8Q9NX08 183 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 ZDHHC7Q9NXF8 308 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 ABI2Q9NYB9 513 aaPredicted RBP11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 UXTQ9UBK9 157 aaPredicted RBP11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 CITO14578 2027 aa11.68□□□□□ -0.54
SMNDC1-203ENST00000460483 WDR27A2RRH5 827 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 MYBPHLA2RUH7 354 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 MTMR11A4FU01 709 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 LRRC53A6NM62 1247 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 SART1O43290 800 aaKnown RBP11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 TGM5O43548 720 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 CLASP2O75122 1294 aaKnown RBP11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 GYPCP04921 128 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 FOSL2P15408 326 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 IGFBP6P24592 240 aaPredicted RBP11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 DNAJB1P25685 340 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 ACADSBP45954 432 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 NRIP1P48552 1158 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 KLK7P49862 253 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 CLCN4P51793 760 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 FOXK1P85037 733 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 CDR2Q01850 454 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 ARID5AQ03989 594 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 BST2Q10589 180 aaKnown RBP11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 CAMK1Q14012 370 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 TDRD12Q587J7 1177 aaKnown RBP11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 PPM1LQ5SGD2 360 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 CES5AQ6NT32 575 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 OSTM1Q86WC4 334 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 HS6ST3Q8IZP7 471 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 EFHBQ8N7U6 833 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 SLC2A14Q8TDB8 520 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 STK32AQ8WU08 396 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 PTCD2Q8WV60 388 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms