RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 ZFYVE19Q96K21 471 aa22.36■■□□□ 1.17
SRM-202ENST00000459997 SCAND2PQ9GZW5 306 aaPredicted RBP22.36■■□□□ 1.17
SRM-202ENST00000459997 SMG9Q9H0W8 520 aaKnown RBP22.36■■□□□ 1.17
SRM-202ENST00000459997 ZMYM5Q9UJ78 669 aa22.36■■□□□ 1.17
SRM-202ENST00000459997 OBSL1O75147 1896 aa22.36■■□□□ 1.17
SRM-202ENST00000459997 DMDP11532 3685 aa22.36■■□□□ 1.17
SRM-202ENST00000459997 SLC38A8A6NNN8 435 aa22.35■■□□□ 1.17
SRM-202ENST00000459997 RPN1P04843 607 aaKnown RBP22.35■■□□□ 1.17
SRM-202ENST00000459997 PDGFRBP09619 1106 aa22.35■■□□□ 1.17
SRM-202ENST00000459997 CASP4P49662 377 aa22.35■■□□□ 1.17
SRM-202ENST00000459997 TNNC1P63316 161 aa22.35■■□□□ 1.17
SRM-202ENST00000459997 FZD5Q13467 585 aa22.35■■□□□ 1.17
SRM-202ENST00000459997 TRPC3Q13507 836 aa22.35■■□□□ 1.17
SRM-202ENST00000459997 WDR72Q3MJ13 1102 aa22.35■■□□□ 1.17
SRM-202ENST00000459997 ARHGAP29Q52LW3 1261 aa22.35■■□□□ 1.17
SRM-202ENST00000459997 C4orf50Q6ZRC1 276 aa22.35■■□□□ 1.17
SRM-202ENST00000459997 CMTM8Q8IZV2 173 aa22.35■■□□□ 1.17
SRM-202ENST00000459997 MAB21L3Q8N8X9 362 aa22.35■■□□□ 1.17
SRM-202ENST00000459997 BPIFB1Q8TDL5 484 aa22.35■■□□□ 1.17
SRM-202ENST00000459997 MYLPFQ96A32 169 aa22.35■■□□□ 1.17
SRM-202ENST00000459997 MRPL45Q9BRJ2 306 aaKnown RBP22.35■■□□□ 1.17
SRM-202ENST00000459997 SNX25Q9H3E2 840 aa22.35■■□□□ 1.17
SRM-202ENST00000459997 CRTAC1Q9NQ79 661 aa22.35■■□□□ 1.17
SRM-202ENST00000459997 UXTQ9UBK9 157 aaPredicted RBP22.35■■□□□ 1.17
SRM-202ENST00000459997 DENND4CQ5VZ89 1909 aa22.35■■□□□ 1.17
SRM-202ENST00000459997 FAM237AA0A1B0GTK4 181 aa22.34■■□□□ 1.17
SRM-202ENST00000459997 PHACTR2O75167 634 aa22.34■■□□□ 1.17
SRM-202ENST00000459997 NOL4O94818 638 aa22.34■■□□□ 1.17
SRM-202ENST00000459997 CCNE1P24864 410 aa22.34■■□□□ 1.17
SRM-202ENST00000459997 DDX6P26196 483 aaKnown RBP eCLIP22.34■■□□□ 1.17
SRM-202ENST00000459997 AVPR1AP37288 418 aa22.34■■□□□ 1.17
SRM-202ENST00000459997 KPNA1P52294 538 aaPredicted RBP22.34■■□□□ 1.17
SRM-202ENST00000459997 MYL6P60660 151 aa22.34■■□□□ 1.17
SRM-202ENST00000459997 MAPRE1Q15691 268 aaKnown RBP22.34■■□□□ 1.17
SRM-202ENST00000459997 TXNDC8Q6A555 127 aa22.34■■□□□ 1.17
SRM-202ENST00000459997 ZC3H14Q6PJT7 736 aaKnown RBP22.34■■□□□ 1.17
SRM-202ENST00000459997 ZNF687Q8N1G0 1237 aa22.34■■□□□ 1.17
SRM-202ENST00000459997 CELF5Q8N6W0 485 aaKnown RBP22.34■■□□□ 1.17
SRM-202ENST00000459997 FSIP1Q8NA03 581 aa22.34■■□□□ 1.17
SRM-202ENST00000459997 PLEKHO2Q8TD55 490 aa22.34■■□□□ 1.17
SRM-202ENST00000459997 MRPS31Q92665 395 aaKnown RBP22.34■■□□□ 1.17
SRM-202ENST00000459997 TRMT2BQ96GJ1 504 aaKnown RBP22.34■■□□□ 1.17
SRM-202ENST00000459997 KCTD10Q9H3F6 313 aa22.34■■□□□ 1.17
SRM-202ENST00000459997 MAGEC2Q9UBF1 373 aaPredicted RBP22.34■■□□□ 1.17
SRM-202ENST00000459997 TACC1O75410 805 aa22.33■■□□□ 1.17
SRM-202ENST00000459997 PRR29P0C7W0 189 aa22.33■■□□□ 1.17
SRM-202ENST00000459997 GNL1P36915 607 aaPredicted RBP22.33■■□□□ 1.17
SRM-202ENST00000459997 MAGEA11P43364 429 aa22.33■■□□□ 1.17
SRM-202ENST00000459997 SOX9P48436 509 aa22.33■■□□□ 1.17
SRM-202ENST00000459997 MLLT6P55198 1093 aaPredicted RBP22.33■■□□□ 1.17
SRM-202ENST00000459997 CYP27A1Q02318 531 aa22.33■■□□□ 1.17
SRM-202ENST00000459997 BIRC3Q13489 604 aa22.33■■□□□ 1.17
SRM-202ENST00000459997 SLC9A9Q8IVB4 645 aa22.33■■□□□ 1.17
SRM-202ENST00000459997 OR6B3Q8NGW1 331 aa22.33■■□□□ 1.17
SRM-202ENST00000459997 TTC8Q8TAM2 541 aa22.33■■□□□ 1.17
SRM-202ENST00000459997 CCDC47Q96A33 483 aaKnown RBP22.33■■□□□ 1.17
SRM-202ENST00000459997 SYAP1Q96A49 352 aaPredicted RBP22.33■■□□□ 1.17
SRM-202ENST00000459997 MSANTD3Q96H12 275 aa22.33■■□□□ 1.17
SRM-202ENST00000459997 DMAC2Q9NW81 257 aa22.33■■□□□ 1.17
SRM-202ENST00000459997 THG1LQ9NWX6 298 aaKnown RBP22.33■■□□□ 1.17
SRM-202ENST00000459997 NXF1Q9UBU9 619 aaKnown RBP22.33■■□□□ 1.17
SRM-202ENST00000459997 FBXO4Q9UKT5 387 aa22.33■■□□□ 1.17
SRM-202ENST00000459997 A0A1W2PQ27 194 aa22.32■■□□□ 1.16
SRM-202ENST00000459997 A0A1W2PQ64 194 aa22.32■■□□□ 1.16
SRM-202ENST00000459997 A0A1W2PQD8 194 aa22.32■■□□□ 1.16
SRM-202ENST00000459997 LRRIQ3A6PVS8 624 aaPredicted RBP22.32■■□□□ 1.16
SRM-202ENST00000459997 PDXKO00764 312 aa22.32■■□□□ 1.16
SRM-202ENST00000459997 CLSTN1O94985 981 aa22.32■■□□□ 1.16
SRM-202ENST00000459997 STAU1O95793 577 aaKnown RBP22.32■■□□□ 1.16
SRM-202ENST00000459997 NR3C1P04150 777 aa22.32■■□□□ 1.16
SRM-202ENST00000459997 ATICP31939 592 aa22.32■■□□□ 1.16
SRM-202ENST00000459997 PLCB2Q00722 1185 aa22.32■■□□□ 1.16
SRM-202ENST00000459997 CSTF1Q05048 431 aaKnown RBP22.32■■□□□ 1.16
SRM-202ENST00000459997 TDRD10Q5VZ19 366 aaKnown RBP22.32■■□□□ 1.16
SRM-202ENST00000459997 MON1AQ86VX9 555 aa22.32■■□□□ 1.16
SRM-202ENST00000459997 PARD3BQ8TEW8 1205 aa22.32■■□□□ 1.16
SRM-202ENST00000459997 MYRFLQ96LU7 910 aa22.32■■□□□ 1.16
SRM-202ENST00000459997 XYLT2Q9H1B5 865 aa22.32■■□□□ 1.16
SRM-202ENST00000459997 SEMA4AQ9H3S1 761 aa22.32■■□□□ 1.16
SRM-202ENST00000459997 GOLPH3LQ9H4A5 285 aa22.32■■□□□ 1.16
SRM-202ENST00000459997 C8orf33Q9H7E9 229 aaPredicted RBP22.32■■□□□ 1.16
SRM-202ENST00000459997 GDPD2Q9HCC8 539 aa22.32■■□□□ 1.16
SRM-202ENST00000459997 GTSE1Q9NYZ3 720 aa22.32■■□□□ 1.16
SRM-202ENST00000459997 CCL26Q9Y258 94 aa22.32■■□□□ 1.16
SRM-202ENST00000459997 CACNA1IQ9P0X4 2223 aa22.31■■□□□ 1.16
SRM-202ENST00000459997 KIF26AQ9ULI4 1882 aaPredicted RBP22.31■■□□□ 1.16
SRM-202ENST00000459997 TADA3O75528 432 aa22.31■■□□□ 1.16
SRM-202ENST00000459997 BDNFP23560 247 aa22.31■■□□□ 1.16
SRM-202ENST00000459997 GRIK1P39086 918 aa22.31■■□□□ 1.16
SRM-202ENST00000459997 AP3M2P53677 418 aa22.31■■□□□ 1.16
SRM-202ENST00000459997 MTAPQ13126 283 aa22.31■■□□□ 1.16
SRM-202ENST00000459997 ZNF528Q3MIS6 628 aa22.31■■□□□ 1.16
SRM-202ENST00000459997 MDH1BQ5I0G3 518 aa22.31■■□□□ 1.16
SRM-202ENST00000459997 C1orf228Q6PIY5 440 aa22.31■■□□□ 1.16
SRM-202ENST00000459997 VSTM1Q6UX27 236 aa22.31■■□□□ 1.16
SRM-202ENST00000459997 KRBA2Q6ZNG9 492 aa22.31■■□□□ 1.16
SRM-202ENST00000459997 MYCBPAPQ8TBZ2 947 aa22.31■■□□□ 1.16
SRM-202ENST00000459997 TMEM174Q8WUU8 243 aa22.31■■□□□ 1.16
SRM-202ENST00000459997 USP13Q92995 863 aaPredicted RBP22.31■■□□□ 1.16
SRM-202ENST00000459997 PCED1BQ96HM7 432 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms