RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 CFAP221Q4G0U5 840 aa23.19■■□□□ 1.3
SSNA1-202ENST00000459860 MDH1BQ5I0G3 518 aa23.19■■□□□ 1.3
SSNA1-202ENST00000459860 FAM171BQ6P995 826 aa23.19■■□□□ 1.3
SSNA1-202ENST00000459860 B3GALNT2Q8NCR0 500 aa23.19■■□□□ 1.3
SSNA1-202ENST00000459860 MYCBPAPQ8TBZ2 947 aa23.19■■□□□ 1.3
SSNA1-202ENST00000459860 MYLPFQ96A32 169 aa23.19■■□□□ 1.3
SSNA1-202ENST00000459860 BCO2Q9BYV7 579 aa23.19■■□□□ 1.3
SSNA1-202ENST00000459860 CRTAC1Q9NQ79 661 aa23.19■■□□□ 1.3
SSNA1-202ENST00000459860 AVENQ9NQS1 362 aaPredicted RBP23.19■■□□□ 1.3
SSNA1-202ENST00000459860 ANO10Q9NW15 660 aa23.19■■□□□ 1.3
SSNA1-202ENST00000459860 CEP72Q9P209 647 aa23.19■■□□□ 1.3
SSNA1-202ENST00000459860 COQ4Q9Y3A0 265 aa23.19■■□□□ 1.3
SSNA1-202ENST00000459860 PTPRDP23468 1912 aa23.19■■□□□ 1.3
SSNA1-202ENST00000459860 P4HA2O15460 535 aa23.18■■□□□ 1.3
SSNA1-202ENST00000459860 AFPP02771 609 aaKnown RBP23.18■■□□□ 1.3
SSNA1-202ENST00000459860 PTPN1P18031 435 aaKnown RBP23.18■■□□□ 1.3
SSNA1-202ENST00000459860 STX1AQ16623 288 aa23.18■■□□□ 1.3
SSNA1-202ENST00000459860 UNC93AQ86WB7 457 aa23.18■■□□□ 1.3
SSNA1-202ENST00000459860 TTC39CQ8N584 583 aa23.18■■□□□ 1.3
SSNA1-202ENST00000459860 SEMA4DQ92854 862 aa23.18■■□□□ 1.3
SSNA1-202ENST00000459860 PSMG2Q969U7 264 aa23.18■■□□□ 1.3
SSNA1-202ENST00000459860 PRRX2Q99811 253 aa23.18■■□□□ 1.3
SSNA1-202ENST00000459860 SDCBP2Q9H190 292 aa23.18■■□□□ 1.3
SSNA1-202ENST00000459860 APOBEC3GQ9HC16 384 aaKnown RBP23.18■■□□□ 1.3
SSNA1-202ENST00000459860 NOTCH4Q99466 2003 aa23.18■■□□□ 1.3
SSNA1-202ENST00000459860 PMM2O15305 246 aa23.17■■□□□ 1.3
SSNA1-202ENST00000459860 FGF19O95750 216 aa23.17■■□□□ 1.3
SSNA1-202ENST00000459860 MYL4P12829 197 aa23.17■■□□□ 1.3
SSNA1-202ENST00000459860 CYP2F1P24903 491 aa23.17■■□□□ 1.3
SSNA1-202ENST00000459860 MTIF2P46199 727 aaKnown RBP23.17■■□□□ 1.3
SSNA1-202ENST00000459860 KCNH2Q12809 1159 aa23.17■■□□□ 1.3
SSNA1-202ENST00000459860 DPEP3Q9H4B8 488 aa23.17■■□□□ 1.3
SSNA1-202ENST00000459860 THAP9Q9H5L6 903 aa23.17■■□□□ 1.3
SSNA1-202ENST00000459860 CDH7Q9ULB5 785 aa23.17■■□□□ 1.3
SSNA1-202ENST00000459860 DOCK8Q8NF50 2099 aa23.17■■□□□ 1.3
SSNA1-202ENST00000459860 PDGFBP01127 241 aaPredicted RBP23.16■■□□□ 1.3
SSNA1-202ENST00000459860 ATF6P18850 670 aa23.16■■□□□ 1.3
SSNA1-202ENST00000459860 CD58P19256 250 aa23.16■■□□□ 1.3
SSNA1-202ENST00000459860 AVPR2P30518 371 aa23.16■■□□□ 1.3
SSNA1-202ENST00000459860 MAGEA11P43364 429 aa23.16■■□□□ 1.3
SSNA1-202ENST00000459860 NDST1P52848 882 aa23.16■■□□□ 1.3
SSNA1-202ENST00000459860 CCDC142Q17RM4 750 aa23.16■■□□□ 1.3
SSNA1-202ENST00000459860 CAVIN1Q6NZI2 390 aaKnown RBP23.16■■□□□ 1.3
SSNA1-202ENST00000459860 VSTM1Q6UX27 236 aa23.16■■□□□ 1.3
SSNA1-202ENST00000459860 SCN4BQ8IWT1 228 aa23.16■■□□□ 1.3
SSNA1-202ENST00000459860 ITFG1Q8TB96 612 aa23.16■■□□□ 1.3
SSNA1-202ENST00000459860 PCED1BQ96HM7 432 aa23.16■■□□□ 1.3
SSNA1-202ENST00000459860 GCNAQ96QF7 691 aa23.16■■□□□ 1.3
SSNA1-202ENST00000459860 MED15Q96RN5 788 aa23.16■■□□□ 1.3
SSNA1-202ENST00000459860 MYADMQ96S97 322 aa23.16■■□□□ 1.3
SSNA1-202ENST00000459860 LPIN3Q9BQK8 851 aa23.16■■□□□ 1.3
SSNA1-202ENST00000459860 ELOVL4Q9GZR5 314 aa23.16■■□□□ 1.3
SSNA1-202ENST00000459860 DNAJC25Q9H1X3 360 aa23.16■■□□□ 1.3
SSNA1-202ENST00000459860 FAM124BQ9H5Z6 455 aaPredicted RBP23.16■■□□□ 1.3
SSNA1-202ENST00000459860 TMEM63CQ9P1W3 806 aa23.16■■□□□ 1.3
SSNA1-202ENST00000459860 EPS15L1Q9UBC2 864 aa23.16■■□□□ 1.3
SSNA1-202ENST00000459860 NME7Q9Y5B8 376 aa23.16■■□□□ 1.3
SSNA1-202ENST00000459860 LAMP2P13473 410 aa23.15■■□□□ 1.3
SSNA1-202ENST00000459860 ANXA13P27216 316 aa23.15■■□□□ 1.3
SSNA1-202ENST00000459860 EPHA5P54756 1037 aa23.15■■□□□ 1.3
SSNA1-202ENST00000459860 YWHAEP62258 255 aaKnown RBP23.15■■□□□ 1.3
SSNA1-202ENST00000459860 INCA1Q0VD86 236 aa23.15■■□□□ 1.3
SSNA1-202ENST00000459860 DNAJB7Q7Z6W7 309 aaPredicted RBP23.15■■□□□ 1.3
SSNA1-202ENST00000459860 HS6ST3Q8IZP7 471 aa23.15■■□□□ 1.3
SSNA1-202ENST00000459860 GIPC2Q8TF65 315 aa23.15■■□□□ 1.3
SSNA1-202ENST00000459860 ING5Q8WYH8 240 aa23.15■■□□□ 1.3
SSNA1-202ENST00000459860 FGF13Q92913 245 aa23.15■■□□□ 1.3
SSNA1-202ENST00000459860 MED10Q9BTT4 135 aa23.15■■□□□ 1.3
SSNA1-202ENST00000459860 LIMD1Q9UGP4 676 aa23.15■■□□□ 1.3
SSNA1-202ENST00000459860 TRIM66O15016 1216 aa23.14■■□□□ 1.29
SSNA1-202ENST00000459860 LRRN2O75325 713 aa23.14■■□□□ 1.29
SSNA1-202ENST00000459860 MICAL2O94851 1124 aa23.14■■□□□ 1.29
SSNA1-202ENST00000459860 CSH1P0DML2 217 aa23.14■■□□□ 1.29
SSNA1-202ENST00000459860 CSH2P0DML3 217 aa23.14■■□□□ 1.29
SSNA1-202ENST00000459860 BDNFP23560 247 aa23.14■■□□□ 1.29
SSNA1-202ENST00000459860 TBXAS1P24557 533 aaPredicted RBP23.14■■□□□ 1.29
SSNA1-202ENST00000459860 GRIK1P39086 918 aa23.14■■□□□ 1.29
SSNA1-202ENST00000459860 SLC5A9Q2M3M2 681 aa23.14■■□□□ 1.29
SSNA1-202ENST00000459860 PRSS36Q5K4E3 855 aa23.14■■□□□ 1.29
SSNA1-202ENST00000459860 ACOT1Q86TX2 421 aa23.14■■□□□ 1.29
SSNA1-202ENST00000459860 NT5C1BQ96P26 610 aa23.14■■□□□ 1.29
SSNA1-202ENST00000459860 NT5C1AQ9BXI3 368 aa23.14■■□□□ 1.29
SSNA1-202ENST00000459860 GDE1Q9NZC3 331 aa23.14■■□□□ 1.29
SSNA1-202ENST00000459860 USP34Q70CQ2 3546 aa23.14■■□□□ 1.29
SSNA1-202ENST00000459860 MYH10P35580 1976 aa23.13■■□□□ 1.29
SSNA1-202ENST00000459860 LRMPQ12912 555 aa23.13■■□□□ 1.29
SSNA1-202ENST00000459860 DDR2Q16832 855 aa23.13■■□□□ 1.29
SSNA1-202ENST00000459860 KLHL40Q2TBA0 621 aa23.13■■□□□ 1.29
SSNA1-202ENST00000459860 TMC8Q8IU68 726 aa23.13■■□□□ 1.29
SSNA1-202ENST00000459860 NPAS3Q8IXF0 933 aa23.13■■□□□ 1.29
SSNA1-202ENST00000459860 NXPE3Q969Y0 559 aa23.13■■□□□ 1.29
SSNA1-202ENST00000459860 CEP295NLQ96MC4 621 aa23.13■■□□□ 1.29
SSNA1-202ENST00000459860 IGSF9Q9P2J2 1179 aa23.13■■□□□ 1.29
SSNA1-202ENST00000459860 SORCS3Q9UPU3 1222 aa23.13■■□□□ 1.29
SSNA1-202ENST00000459860 CILPO75339 1184 aa23.12■■□□□ 1.29
SSNA1-202ENST00000459860 CEBPBP17676 345 aa23.12■■□□□ 1.29
SSNA1-202ENST00000459860 CDC25CP30307 473 aa23.12■■□□□ 1.29
SSNA1-202ENST00000459860 GPR15P49685 360 aa23.12■■□□□ 1.29
SSNA1-202ENST00000459860 ORC1Q13415 861 aa23.12■■□□□ 1.29
SSNA1-202ENST00000459860 CUL2Q13617 745 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms