RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 NOL4O94818 638 aa17.22■□□□□ 0.35
COL7A1-203ENST00000459756 GDI1P31150 447 aa17.22■□□□□ 0.35
COL7A1-203ENST00000459756 GPR15P49685 360 aa17.22■□□□□ 0.35
COL7A1-203ENST00000459756 NLRP12P59046 1061 aa17.22■□□□□ 0.35
COL7A1-203ENST00000459756 ENPEPQ07075 957 aa17.22■□□□□ 0.35
COL7A1-203ENST00000459756 DDR2Q16832 855 aa17.22■□□□□ 0.35
COL7A1-203ENST00000459756 SGSM1Q2NKQ1 1148 aa17.22■□□□□ 0.35
COL7A1-203ENST00000459756 EDRF1Q3B7T1 1238 aa17.22■□□□□ 0.35
COL7A1-203ENST00000459756 ZACNQ401N2 412 aa17.22■□□□□ 0.35
COL7A1-203ENST00000459756 ZCWPW2Q504Y3 356 aa17.22■□□□□ 0.35
COL7A1-203ENST00000459756 ZNF667Q5HYK9 610 aa17.22■□□□□ 0.35
COL7A1-203ENST00000459756 VSTM1Q6UX27 236 aa17.22■□□□□ 0.35
COL7A1-203ENST00000459756 INTS8Q75QN2 995 aaKnown RBP17.22■□□□□ 0.35
COL7A1-203ENST00000459756 DTWD2Q8NBA8 298 aa17.22■□□□□ 0.35
COL7A1-203ENST00000459756 PJA1Q8NG27 643 aa17.22■□□□□ 0.35
COL7A1-203ENST00000459756 OR6B3Q8NGW1 331 aa17.22■□□□□ 0.35
COL7A1-203ENST00000459756 TRMT2BQ96GJ1 504 aaKnown RBP17.22■□□□□ 0.35
COL7A1-203ENST00000459756 MYRFLQ96LU7 910 aa17.22■□□□□ 0.35
COL7A1-203ENST00000459756 CEP295NLQ96MC4 621 aa17.22■□□□□ 0.35
COL7A1-203ENST00000459756 GTPBP4Q9BZE4 634 aaKnown RBP17.22■□□□□ 0.35
COL7A1-203ENST00000459756 UXTQ9UBK9 157 aaPredicted RBP17.22■□□□□ 0.35
COL7A1-203ENST00000459756 NUP210Q8TEM1 1887 aaPredicted RBP17.22■□□□□ 0.35
COL7A1-203ENST00000459756 SOBPA7XYQ1 873 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 ZNF263O14978 683 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 AKAP3O75969 853 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 CLSTN1O94985 981 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 VNN1O95497 513 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 F11P03951 625 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 KRT13P13646 458 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 DDX6P26196 483 aaKnown RBP eCLIP17.21■□□□□ 0.35
COL7A1-203ENST00000459756 PSMC2P35998 433 aaKnown RBP17.21■□□□□ 0.35
COL7A1-203ENST00000459756 VAMP7P51809 220 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 CYP4F8P98187 520 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 CYP27A1Q02318 531 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 FCHO2Q0JRZ9 810 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 ADAM9Q13443 819 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 ZNF658Q5TYW1 1059 aaPredicted RBP17.21■□□□□ 0.35
COL7A1-203ENST00000459756 SDHAF4Q5VUM1 108 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 SV2AQ7L0J3 742 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 TMEM150AQ86TG1 271 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 SCN4BQ8IWT1 228 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 YAF2Q8IY57 180 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 FAM186BQ8IYM0 893 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 SMYD4Q8IYR2 804 aaPredicted RBP17.21■□□□□ 0.35
COL7A1-203ENST00000459756 SPATA20Q8TB22 786 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 TAF4BQ92750 862 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 RSPRY1Q96DX4 576 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 NELL2Q99435 816 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 OSBPL6Q9BZF3 934 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 FOXQ1Q9C009 403 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 OBP2AQ9NY56 170 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 MAGED2Q9UNF1 606 aaPredicted RBP17.21■□□□□ 0.35
COL7A1-203ENST00000459756 PIEZO1Q92508 2521 aa17.21■□□□□ 0.35
COL7A1-203ENST00000459756 DENND4CQ5VZ89 1909 aa17.2■□□□□ 0.34
COL7A1-203ENST00000459756 SLC38A8A6NNN8 435 aa17.2■□□□□ 0.34
COL7A1-203ENST00000459756 A8MXQ7 604 aa17.2■□□□□ 0.34
COL7A1-203ENST00000459756 H0Y858 1186 aa17.2■□□□□ 0.34
COL7A1-203ENST00000459756 DPYSL4O14531 572 aa17.2■□□□□ 0.34
COL7A1-203ENST00000459756 P4HA1P13674 534 aa17.2■□□□□ 0.34
COL7A1-203ENST00000459756 PTPN1P18031 435 aaKnown RBP17.2■□□□□ 0.34
COL7A1-203ENST00000459756 HOXD11P31277 338 aaPredicted RBP17.2■□□□□ 0.34
COL7A1-203ENST00000459756 COBLL1Q53SF7 1204 aa17.2■□□□□ 0.34
COL7A1-203ENST00000459756 MDH1BQ5I0G3 518 aa17.2■□□□□ 0.34
COL7A1-203ENST00000459756 C1orf220Q5T0J3 134 aa17.2■□□□□ 0.34
COL7A1-203ENST00000459756 TPRG1Q6ZUI0 275 aa17.2■□□□□ 0.34
COL7A1-203ENST00000459756 ELOA2Q8IYF1 753 aaPredicted RBP17.2■□□□□ 0.34
COL7A1-203ENST00000459756 ATOH1Q92858 354 aaPredicted RBP17.2■□□□□ 0.34
COL7A1-203ENST00000459756 SMARCE1Q969G3 411 aa17.2■□□□□ 0.34
COL7A1-203ENST00000459756 PCED1BQ96HM7 432 aa17.2■□□□□ 0.34
COL7A1-203ENST00000459756 SPATA17Q96L03 361 aa17.2■□□□□ 0.34
COL7A1-203ENST00000459756 SLC46A2Q9BY10 475 aa17.2■□□□□ 0.34
COL7A1-203ENST00000459756 SMYD3Q9H7B4 428 aa17.2■□□□□ 0.34
COL7A1-203ENST00000459756 HEBP1Q9NRV9 189 aa17.2■□□□□ 0.34
COL7A1-203ENST00000459756 MRPS17Q9Y2R5 130 aaKnown RBP17.2■□□□□ 0.34
COL7A1-203ENST00000459756 NME7Q9Y5B8 376 aa17.2■□□□□ 0.34
COL7A1-203ENST00000459756 NCANO14594 1321 aa17.2■□□□□ 0.34
COL7A1-203ENST00000459756 CHADO15335 359 aa17.19■□□□□ 0.34
COL7A1-203ENST00000459756 DCNP07585 359 aaKnown RBP17.19■□□□□ 0.34
COL7A1-203ENST00000459756 BDNFP23560 247 aa17.19■□□□□ 0.34
COL7A1-203ENST00000459756 GRIK1P39086 918 aa17.19■□□□□ 0.34
COL7A1-203ENST00000459756 PRCPP42785 496 aa17.19■□□□□ 0.34
COL7A1-203ENST00000459756 UBXN2BQ14CS0 331 aa17.19■□□□□ 0.34
COL7A1-203ENST00000459756 ZNF852Q6ZMS4 543 aa17.19■□□□□ 0.34
COL7A1-203ENST00000459756 CMTM8Q8IZV2 173 aa17.19■□□□□ 0.34
COL7A1-203ENST00000459756 B3GALNT2Q8NCR0 500 aa17.19■□□□□ 0.34
COL7A1-203ENST00000459756 STKLD1Q8NE28 680 aa17.19■□□□□ 0.34
COL7A1-203ENST00000459756 MRPS31Q92665 395 aaKnown RBP17.19■□□□□ 0.34
COL7A1-203ENST00000459756 DPEP3Q9H4B8 488 aa17.19■□□□□ 0.34
COL7A1-203ENST00000459756 LTB4R2Q9NPC1 389 aa17.19■□□□□ 0.34
COL7A1-203ENST00000459756 DLGAP2Q9P1A6 1054 aa17.19■□□□□ 0.34
COL7A1-203ENST00000459756 PCDHA5Q9Y5H7 936 aa17.19■□□□□ 0.34
COL7A1-203ENST00000459756 PTPRDP23468 1912 aa17.19■□□□□ 0.34
COL7A1-203ENST00000459756 MIA3Q5JRA6 1907 aa17.19■□□□□ 0.34
COL7A1-203ENST00000459756 OBSL1O75147 1896 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 TICRRQ7Z2Z1 1910 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 FAM170BA6NMN3 283 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 ARNTLO00327 626 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 MAN2B1O00754 1011 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 TRIM66O15016 1216 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 CETN3O15182 167 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms