RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 BUB1O43683 1085 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 HUS1O60921 280 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 CILPO75339 1184 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 PALMO75781 387 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 MTA2O94776 668 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 EOMESO95936 686 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 CYP1A1P04798 512 aaPredicted RBP9.49□□□□□ -0.89
VPS50-207ENST00000458530 WEE2P0C1S8 567 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 VDRP11473 427 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 CD19P15391 556 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 PRLRP16471 622 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 ABCB4P21439 1286 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 RPL9P32969 192 aaKnown RBP9.49□□□□□ -0.89
VPS50-207ENST00000458530 GTF2F1P35269 517 aaKnown RBP eCLIP9.49□□□□□ -0.89
VPS50-207ENST00000458530 GRIK3Q13003 919 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 CLUL1Q15846 466 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 SGO2Q562F6 1265 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 GLRA4Q5JXX5 417 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 PAPD7Q5XG87 772 aaKnown RBP9.49□□□□□ -0.89
VPS50-207ENST00000458530 C11orf63Q6NUN7 778 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 NUDT18Q6ZVK8 323 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 DPH6Q7L8W6 267 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 UNC93AQ86WB7 457 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 GJD3Q8N144 294 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.49□□□□□ -0.89
VPS50-207ENST00000458530 OLIG1Q8TAK6 271 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 CXorf38Q8TB03 319 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 SPATA18Q8TC71 538 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 ZNF606Q8WXB4 792 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 ARNTL2Q8WYA1 636 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 TMEM176AQ96HP8 235 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 RPGRIP1Q96KN7 1286 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 ZMAT2Q96NC0 199 aaKnown RBP9.49□□□□□ -0.89
VPS50-207ENST00000458530 PPP1R10Q96QC0 940 aaKnown RBP9.49□□□□□ -0.89
VPS50-207ENST00000458530 ADAM2Q99965 735 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 PACSIN1Q9BY11 444 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 SMYD3Q9H7B4 428 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 UBE2ZQ9H832 354 aaPredicted RBP9.49□□□□□ -0.89
VPS50-207ENST00000458530 AGO3Q9H9G7 860 aaKnown RBP9.49□□□□□ -0.89
VPS50-207ENST00000458530 CERS4Q9HA82 394 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 MRPL47Q9HD33 250 aaKnown RBP9.49□□□□□ -0.89
VPS50-207ENST00000458530 GDAP2Q9NXN4 497 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 KLK14Q9P0G3 267 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 CTTNBP2NLQ9P2B4 639 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 RNF14Q9UBS8 474 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 TUBGCP4Q9UGJ1 667 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 STRIP2Q9ULQ0 834 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 POLIQ9UNA4 740 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 DUSP10Q9Y6W6 482 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 SCN5AQ14524 2016 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 MICAL3Q7RTP6 2002 aa9.49□□□□□ -0.89
VPS50-207ENST00000458530 TSC2P49815 1807 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 UQCRHLA0A096LP55 91 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 KPNA7A9QM74 516 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 PIRO00625 290 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 CES2O00748 559 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 BAIAP3O94812 1187 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 ABL1P00519 1130 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 CYP1A2P05177 515 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 UQCRHP07919 91 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 UNGP13051 313 aaPredicted RBP9.48□□□□□ -0.89
VPS50-207ENST00000458530 MLH1P40692 756 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 GUCY2FP51841 1108 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 NOMO3P69849 1222 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 GPNMBQ14956 572 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 COL19A1Q14993 1142 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 CCDC181Q5TID7 509 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 NAA35Q5VZE5 725 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 GLB1LQ6UWU2 654 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 SLC24A5Q71RS6 500 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 PEX26Q7Z412 305 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 DAAM2Q86T65 1068 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 ECHDC2Q86YB7 292 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 PHF13Q86YI8 300 aaPredicted RBP9.48□□□□□ -0.89
VPS50-207ENST00000458530 TMEM86AQ8N2M4 240 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 TOP6BLQ8N6T0 577 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 APPL2Q8NEU8 664 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 TPCN2Q8NHX9 752 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 SLC35G2Q8TBE7 412 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 ZNF564Q8TBZ8 553 aaPredicted RBP9.48□□□□□ -0.89
VPS50-207ENST00000458530 URGCPQ8TCY9 931 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 SEPT8Q92599 483 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 C18orf25Q96B23 403 aaPredicted RBP9.48□□□□□ -0.89
VPS50-207ENST00000458530 TNIP3Q96KP6 325 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 PCDHB18PQ96TA0 734 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 SELENOOQ9BVL4 669 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 THAP2Q9H0W7 228 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 LHX5Q9H2C1 402 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 SNX25Q9H3E2 840 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 RGS18Q9NS28 235 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 AMFRQ9UKV5 643 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 SNX12Q9UMY4 172 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 TFR2Q9UP52 801 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 SNX9Q9Y5X1 595 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 ZDBF2Q9HCK1 2354 aa9.48□□□□□ -0.89
VPS50-207ENST00000458530 LCHNA4D1U4 455 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 CTAGE15A4D2H0 777 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 GRID2IPA4D2P6 1211 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 ARL5CA6NH57 179 aa9.47□□□□□ -0.89
VPS50-207ENST00000458530 EFCAB8A8MWE9 144 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms