RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 TCEAL3Q969E4 200 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 CALML4Q96GE6 196 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 TMX3Q96JJ7 454 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 HHIPQ96QV1 700 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 ACBD6Q9BR61 282 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 PI4K2AQ9BTU6 479 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 LSM14BQ9BX40 385 aaKnown RBP12.81□□□□□ -0.36
LMCD1-206ENST00000456506 ABCB6Q9NP58 842 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 EBF1Q9UH73 591 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 ANGPTL2Q9UKU9 493 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 SLC8A2Q9UPR5 921 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 WASF3Q9UPY6 502 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 ASCC3Q8N3C0 2202 aaKnown RBP12.8□□□□□ -0.36
LMCD1-206ENST00000456506 GABRDO14764 452 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 DCLK1O15075 740 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 KCNK5O95279 499 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 CSH1P0DML2 217 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 CSH2P0DML3 217 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 TCF3P15923 654 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 DRD1P21728 446 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 CYP2F1P24903 491 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 LONP1P36776 959 aaKnown RBP12.8□□□□□ -0.36
LMCD1-206ENST00000456506 ZXDBP98169 803 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 FAM160A1Q05DH4 1040 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 BFSP1Q12934 665 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 PDGFRLQ15198 375 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 EML3Q32P44 896 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 INTS6LQ5JSJ4 861 aaKnown RBP12.8□□□□□ -0.36
LMCD1-206ENST00000456506 IL31Q6EBC2 164 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 LIMS2Q7Z4I7 341 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 SFR1Q86XK3 245 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 DCP1BQ8IZD4 617 aaKnown RBP12.8□□□□□ -0.36
LMCD1-206ENST00000456506 C12orf50Q8NA57 414 aaPredicted RBP12.8□□□□□ -0.36
LMCD1-206ENST00000456506 OSCP1Q8WVF1 389 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 LARP4BQ92615 738 aaKnown RBP12.8□□□□□ -0.36
LMCD1-206ENST00000456506 HVCN1Q96D96 273 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 DNAJC19Q96DA6 116 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 ZNF560Q96MR9 790 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 CYP2S1Q96SQ9 504 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 P2RY13Q9BPV8 354 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 ECT2Q9H8V3 914 aa12.8□□□□□ -0.36
LMCD1-206ENST00000456506 PRPF40AO75400 957 aaKnown RBP12.79□□□□□ -0.36
LMCD1-206ENST00000456506 IL18RAPO95256 599 aa12.79□□□□□ -0.36
LMCD1-206ENST00000456506 ITGB3P05106 788 aa12.79□□□□□ -0.36
LMCD1-206ENST00000456506 CCDC192P0DO97 292 aa12.79□□□□□ -0.36
LMCD1-206ENST00000456506 ACAT1P24752 427 aaKnown RBP12.79□□□□□ -0.36
LMCD1-206ENST00000456506 POLR2BP30876 1174 aaKnown RBP12.79□□□□□ -0.36
LMCD1-206ENST00000456506 DDIT3P35638 169 aa12.79□□□□□ -0.36
LMCD1-206ENST00000456506 CASP5P51878 434 aa12.79□□□□□ -0.36
LMCD1-206ENST00000456506 NFE2Q16621 373 aaPredicted RBP12.79□□□□□ -0.36
LMCD1-206ENST00000456506 DDR2Q16832 855 aa12.79□□□□□ -0.36
LMCD1-206ENST00000456506 CFAP221Q4G0U5 840 aa12.79□□□□□ -0.36
LMCD1-206ENST00000456506 FBXO43Q4G163 708 aa12.79□□□□□ -0.36
LMCD1-206ENST00000456506 BRSK2Q8IWQ3 736 aa12.79□□□□□ -0.36
LMCD1-206ENST00000456506 RPLP0P6Q8NHW5 317 aa12.79□□□□□ -0.36
LMCD1-206ENST00000456506 MRPS31Q92665 395 aaKnown RBP12.79□□□□□ -0.36
LMCD1-206ENST00000456506 EPSTI1Q96J88 318 aa12.79□□□□□ -0.36
LMCD1-206ENST00000456506 TMEM121BQ9BXQ6 578 aaPredicted RBP12.79□□□□□ -0.36
LMCD1-206ENST00000456506 FGFBP2Q9BYJ0 223 aa12.79□□□□□ -0.36
LMCD1-206ENST00000456506 ZHX3Q9H4I2 956 aa12.79□□□□□ -0.36
LMCD1-206ENST00000456506 TMEM206Q9H813 350 aa12.79□□□□□ -0.36
LMCD1-206ENST00000456506 VPS45Q9NRW7 570 aa12.79□□□□□ -0.36
LMCD1-206ENST00000456506 GDAP2Q9NXN4 497 aa12.79□□□□□ -0.36
LMCD1-206ENST00000456506 DDX43Q9NXZ2 648 aaKnown RBP12.79□□□□□ -0.36
LMCD1-206ENST00000456506 SIX4Q9UIU6 781 aa12.79□□□□□ -0.36
LMCD1-206ENST00000456506 MAGED2Q9UNF1 606 aaPredicted RBP12.79□□□□□ -0.36
LMCD1-206ENST00000456506 KIF3AQ9Y496 699 aa12.79□□□□□ -0.36
LMCD1-206ENST00000456506 WNT6Q9Y6F9 365 aa12.79□□□□□ -0.36
LMCD1-206ENST00000456506 PTPRJQ12913 1337 aa12.79□□□□□ -0.36
LMCD1-206ENST00000456506 BCLAF3A2AJT9 711 aaKnown RBP12.78□□□□□ -0.36
LMCD1-206ENST00000456506 MYMKA6NI61 221 aa12.78□□□□□ -0.36
LMCD1-206ENST00000456506 TBCAO75347 108 aaKnown RBP12.78□□□□□ -0.36
LMCD1-206ENST00000456506 KRT18P05783 430 aaKnown RBP12.78□□□□□ -0.36
LMCD1-206ENST00000456506 OPRD1P41143 372 aa12.78□□□□□ -0.36
LMCD1-206ENST00000456506 PNPLA4P41247 253 aa12.78□□□□□ -0.36
LMCD1-206ENST00000456506 TSPY1Q01534 308 aa12.78□□□□□ -0.36
LMCD1-206ENST00000456506 DMC1Q14565 340 aa12.78□□□□□ -0.36
LMCD1-206ENST00000456506 SF3A1Q15459 793 aaKnown RBP12.78□□□□□ -0.36
LMCD1-206ENST00000456506 TAF12Q16514 161 aa12.78□□□□□ -0.36
LMCD1-206ENST00000456506 FAM171BQ6P995 826 aa12.78□□□□□ -0.36
LMCD1-206ENST00000456506 RASSF3Q86WH2 238 aa12.78□□□□□ -0.36
LMCD1-206ENST00000456506 TMEM86AQ8N2M4 240 aa12.78□□□□□ -0.36
LMCD1-206ENST00000456506 LRRC52Q8N7C0 313 aa12.78□□□□□ -0.36
LMCD1-206ENST00000456506 POMGNT1Q8WZA1 660 aa12.78□□□□□ -0.36
LMCD1-206ENST00000456506 CD101Q93033 1021 aa12.78□□□□□ -0.36
LMCD1-206ENST00000456506 UXTQ9UBK9 157 aaPredicted RBP12.78□□□□□ -0.36
LMCD1-206ENST00000456506 GTF3C4Q9UKN8 822 aa12.78□□□□□ -0.36
LMCD1-206ENST00000456506 AGAP1Q9UPQ3 857 aa12.78□□□□□ -0.36
LMCD1-206ENST00000456506 LNP1A1A4G5 178 aa12.77□□□□□ -0.37
LMCD1-206ENST00000456506 FRMD3A2A2Y4 597 aa12.77□□□□□ -0.37
LMCD1-206ENST00000456506 C2orf78A6NCI8 922 aa12.77□□□□□ -0.37
LMCD1-206ENST00000456506 K7EQS6 105 aa12.77□□□□□ -0.37
LMCD1-206ENST00000456506 APBB3O95704 486 aa12.77□□□□□ -0.37
LMCD1-206ENST00000456506 HNRNPLP14866 589 aaKnown RBP eCLIP12.77□□□□□ -0.376e-7■■■■□ 22.6
LMCD1-206ENST00000456506 AMPD2Q01433 879 aa12.77□□□□□ -0.37
LMCD1-206ENST00000456506 RABEP1Q15276 862 aa12.77□□□□□ -0.37
LMCD1-206ENST00000456506 SOWAHAQ2M3V2 549 aa12.77□□□□□ -0.37
LMCD1-206ENST00000456506 L1TD1Q5T7N2 865 aaKnown RBP12.77□□□□□ -0.37
LMCD1-206ENST00000456506 CC2D1AQ6P1N0 951 aaPredicted RBP12.77□□□□□ -0.37
LMCD1-206ENST00000456506 DYMQ7RTS9 669 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms