RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 NME7Q9Y5B8 376 aa23.33■■□□□ 1.33
SEC22C-213ENST00000456222 OTOL1A6NHN0 477 aaPredicted RBP23.32■■□□□ 1.32
SEC22C-213ENST00000456222 CYP2J2P51589 502 aa23.32■■□□□ 1.32
SEC22C-213ENST00000456222 PSMC1P62191 440 aaKnown RBP23.32■■□□□ 1.32
SEC22C-213ENST00000456222 CUL4BQ13620 913 aa23.32■■□□□ 1.32
SEC22C-213ENST00000456222 PON2Q15165 354 aa23.32■■□□□ 1.32
SEC22C-213ENST00000456222 SNRNP35Q16560 246 aaKnown RBP23.32■■□□□ 1.32
SEC22C-213ENST00000456222 DUOXA2Q1HG44 320 aa23.32■■□□□ 1.32
SEC22C-213ENST00000456222 RESP18Q5W5W9 173 aa23.32■■□□□ 1.32
SEC22C-213ENST00000456222 FAM171BQ6P995 826 aa23.32■■□□□ 1.32
SEC22C-213ENST00000456222 MAMSTRQ6ZN01 415 aa23.32■■□□□ 1.32
SEC22C-213ENST00000456222 UNC13DQ70J99 1090 aa23.32■■□□□ 1.32
SEC22C-213ENST00000456222 CELF5Q8N6W0 485 aaKnown RBP23.32■■□□□ 1.32
SEC22C-213ENST00000456222 CHFRQ96EP1 664 aa23.32■■□□□ 1.32
SEC22C-213ENST00000456222 CHAMP1Q96JM3 812 aa23.32■■□□□ 1.32
SEC22C-213ENST00000456222 CRTAC1Q9NQ79 661 aa23.32■■□□□ 1.32
SEC22C-213ENST00000456222 HPS4Q9NQG7 708 aa23.32■■□□□ 1.32
SEC22C-213ENST00000456222 GKN1Q9NS71 199 aa23.32■■□□□ 1.32
SEC22C-213ENST00000456222 NOL4O94818 638 aa23.31■■□□□ 1.32
SEC22C-213ENST00000456222 CST3P01034 146 aaPredicted RBP23.31■■□□□ 1.32
SEC22C-213ENST00000456222 TNNC2P02585 160 aa23.31■■□□□ 1.32
SEC22C-213ENST00000456222 CSH1P0DML2 217 aa23.31■■□□□ 1.32
SEC22C-213ENST00000456222 CSH2P0DML3 217 aa23.31■■□□□ 1.32
SEC22C-213ENST00000456222 AFMP43652 599 aa23.31■■□□□ 1.32
SEC22C-213ENST00000456222 ID4P47928 161 aa23.31■■□□□ 1.32
SEC22C-213ENST00000456222 ME1P48163 572 aa23.31■■□□□ 1.32
SEC22C-213ENST00000456222 LHX1P48742 406 aa23.31■■□□□ 1.32
SEC22C-213ENST00000456222 DNM1Q05193 864 aaKnown RBP23.31■■□□□ 1.32
SEC22C-213ENST00000456222 DMWDQ09019 674 aa23.31■■□□□ 1.32
SEC22C-213ENST00000456222 TRIM68Q6AZZ1 485 aa23.31■■□□□ 1.32
SEC22C-213ENST00000456222 TRAPPC11Q7Z392 1133 aa23.31■■□□□ 1.32
SEC22C-213ENST00000456222 RALGPS2Q86X27 583 aaPredicted RBP23.31■■□□□ 1.32
SEC22C-213ENST00000456222 WDR49Q8IV35 697 aa23.31■■□□□ 1.32
SEC22C-213ENST00000456222 SPATA18Q8TC71 538 aa23.31■■□□□ 1.32
SEC22C-213ENST00000456222 RMDN1Q96DB5 314 aa23.31■■□□□ 1.32
SEC22C-213ENST00000456222 MSANTD3Q96H12 275 aa23.31■■□□□ 1.32
SEC22C-213ENST00000456222 SLC22A12Q96S37 553 aa23.31■■□□□ 1.32
SEC22C-213ENST00000456222 FAM83CQ9BQN1 747 aa23.31■■□□□ 1.32
SEC22C-213ENST00000456222 EPC1Q9H2F5 836 aa23.31■■□□□ 1.32
SEC22C-213ENST00000456222 SLC39A2Q9NP94 309 aa23.31■■□□□ 1.32
SEC22C-213ENST00000456222 DLATP10515 647 aaKnown RBP23.3■■□□□ 1.32
SEC22C-213ENST00000456222 PCSK1P29120 753 aa23.3■■□□□ 1.32
SEC22C-213ENST00000456222 CYP24A1Q07973 514 aa23.3■■□□□ 1.32
SEC22C-213ENST00000456222 MYO1EQ12965 1108 aa23.3■■□□□ 1.32
SEC22C-213ENST00000456222 SURF1Q15526 300 aa23.3■■□□□ 1.32
SEC22C-213ENST00000456222 CFAP221Q4G0U5 840 aa23.3■■□□□ 1.32
SEC22C-213ENST00000456222 MON1AQ86VX9 555 aa23.3■■□□□ 1.32
SEC22C-213ENST00000456222 SPATA2LQ8IUW3 424 aaPredicted RBP23.3■■□□□ 1.32
SEC22C-213ENST00000456222 ZNF516Q92618 1163 aa23.3■■□□□ 1.32
SEC22C-213ENST00000456222 CCDC127Q96BQ5 260 aa23.3■■□□□ 1.32
SEC22C-213ENST00000456222 SYT15Q9BQS2 421 aa23.3■■□□□ 1.32
SEC22C-213ENST00000456222 SMG5Q9UPR3 1016 aaKnown RBP23.3■■□□□ 1.32
SEC22C-213ENST00000456222 PDGFRBP09619 1106 aa23.29■■□□□ 1.32
SEC22C-213ENST00000456222 ARSAP15289 507 aa23.29■■□□□ 1.32
SEC22C-213ENST00000456222 AVPR1AP37288 418 aa23.29■■□□□ 1.32
SEC22C-213ENST00000456222 CCR3P51677 355 aa23.29■■□□□ 1.32
SEC22C-213ENST00000456222 RPL10AP62906 217 aaKnown RBP23.29■■□□□ 1.32
SEC22C-213ENST00000456222 CCINQ13939 588 aa23.29■■□□□ 1.32
SEC22C-213ENST00000456222 PSMD6Q15008 389 aa23.29■■□□□ 1.32
SEC22C-213ENST00000456222 ITPRIPL2Q3MIP1 535 aa23.29■■□□□ 1.32
SEC22C-213ENST00000456222 SCN4BQ8IWT1 228 aa23.29■■□□□ 1.32
SEC22C-213ENST00000456222 MRPS31Q92665 395 aaKnown RBP23.29■■□□□ 1.32
SEC22C-213ENST00000456222 MYLPFQ96A32 169 aa23.29■■□□□ 1.32
SEC22C-213ENST00000456222 TRMT2BQ96GJ1 504 aaKnown RBP23.29■■□□□ 1.32
SEC22C-213ENST00000456222 MYRFLQ96LU7 910 aa23.29■■□□□ 1.32
SEC22C-213ENST00000456222 MRPL45Q9BRJ2 306 aaKnown RBP23.29■■□□□ 1.32
SEC22C-213ENST00000456222 IER2Q9BTL4 223 aa23.29■■□□□ 1.32
SEC22C-213ENST00000456222 EBF3Q9H4W6 596 aa23.29■■□□□ 1.32
SEC22C-213ENST00000456222 MAGEF1Q9HAY2 307 aa23.29■■□□□ 1.32
SEC22C-213ENST00000456222 KIAA1586Q9HCI6 787 aa23.29■■□□□ 1.32
SEC22C-213ENST00000456222 TDP1Q9NUW8 608 aa23.29■■□□□ 1.32
SEC22C-213ENST00000456222 UBE4BO95155 1302 aa23.29■■□□□ 1.32
SEC22C-213ENST00000456222 HSP90AA1P07900 732 aaKnown RBP23.28■■□□□ 1.32
SEC22C-213ENST00000456222 CXCL12P48061 93 aa23.28■■□□□ 1.32
SEC22C-213ENST00000456222 PLCB2Q00722 1185 aa23.28■■□□□ 1.32
SEC22C-213ENST00000456222 BMT2Q1RMZ1 405 aa23.28■■□□□ 1.32
SEC22C-213ENST00000456222 NAIF1Q69YI7 327 aaPredicted RBP23.28■■□□□ 1.32
SEC22C-213ENST00000456222 DPH6Q7L8W6 267 aa23.28■■□□□ 1.32
SEC22C-213ENST00000456222 SPEM1Q8N4L4 309 aa23.28■■□□□ 1.32
SEC22C-213ENST00000456222 PLEKHO2Q8TD55 490 aa23.28■■□□□ 1.32
SEC22C-213ENST00000456222 CYP2S1Q96SQ9 504 aa23.28■■□□□ 1.32
SEC22C-213ENST00000456222 CGRRF1Q99675 332 aa23.28■■□□□ 1.32
SEC22C-213ENST00000456222 FAM126AQ9BYI3 521 aaPredicted RBP23.28■■□□□ 1.32
SEC22C-213ENST00000456222 SERTAD1Q9UHV2 236 aa23.28■■□□□ 1.32
SEC22C-213ENST00000456222 RCOR1Q9UKL0 485 aa23.28■■□□□ 1.32
SEC22C-213ENST00000456222 SDK1Q7Z5N4 2213 aa23.28■■□□□ 1.32
SEC22C-213ENST00000456222 HELZP42694 1942 aaKnown RBP23.27■■□□□ 1.32
SEC22C-213ENST00000456222 SPTBN2O15020 2390 aa23.27■■□□□ 1.32
SEC22C-213ENST00000456222 K7ESF4 209 aa23.27■■□□□ 1.32
SEC22C-213ENST00000456222 ACTN4O43707 911 aaKnown RBP23.27■■□□□ 1.32
SEC22C-213ENST00000456222 KLRC4O43908 158 aa23.27■■□□□ 1.32
SEC22C-213ENST00000456222 TNNI1P19237 187 aa23.27■■□□□ 1.32
SEC22C-213ENST00000456222 WARSP23381 471 aaKnown RBP23.27■■□□□ 1.32
SEC22C-213ENST00000456222 BDNFP23560 247 aa23.27■■□□□ 1.32
SEC22C-213ENST00000456222 DDX6P26196 483 aaKnown RBP eCLIP23.27■■□□□ 1.32
SEC22C-213ENST00000456222 CASP4P49662 377 aa23.27■■□□□ 1.32
SEC22C-213ENST00000456222 LRRC32Q14392 662 aa23.27■■□□□ 1.32
SEC22C-213ENST00000456222 PKN3Q6P5Z2 889 aa23.27■■□□□ 1.32
SEC22C-213ENST00000456222 C1orf228Q6PIY5 440 aa23.27■■□□□ 1.32
SEC22C-213ENST00000456222 XXYLT1Q8NBI6 393 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms