RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 CDKL3Q8IVW4 592 aaPredicted RBP12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 SH3TC2Q8TF17 1288 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 CD209Q9NNX6 404 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.84□□□□□ -0.359e-9■□□□□ 10
NEDD4L-208ENST00000456173 POLR1AO95602 1720 aaPredicted RBP12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 TMEM2Q9UHN6 1383 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 INO80B-WBP1J3KQ70 363 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 TM9SF1O15321 606 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 SPAG6O75602 509 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 BAIAP3O94812 1187 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 MYBP10242 640 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 BMP3P12645 472 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 RPA3P35244 121 aaPredicted RBP12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 TUFMP49411 452 aaKnown RBP12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 IMPG1Q17R60 797 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 THOC7Q6I9Y2 204 aaKnown RBP12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 LLGL2Q6P1M3 1020 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 CYP2R1Q6VVX0 501 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 PRUNE1Q86TP1 453 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 SGF29Q96ES7 293 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 CDRT15Q96T59 188 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 INO80BQ9C086 356 aaPredicted RBP12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 ABCB10Q9NRK6 738 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 NINJ2Q9NZG7 142 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 WDR35Q9P2L0 1181 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 PRDM15P57071 1507 aaPredicted RBP12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 RNF103O00237 685 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 RBP3P10745 1247 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 EIF2AK2P19525 551 aaKnown RBP12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 SCNN1DP51172 638 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 ABCE1P61221 599 aaKnown RBP12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 AASDHQ4L235 1098 aaPredicted RBP12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 TBCELQ5QJ74 424 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 FAXCQ5TGI0 409 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 GPR107Q5VW38 600 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 NET1Q7Z628 596 aaPredicted RBP12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 NOP9Q86U38 636 aaKnown RBP12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 DRAXINQ8NBI3 349 aaPredicted RBP12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 PCDH12Q9NPG4 1184 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 SPATA2Q9UM82 520 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 DMTF1Q9Y222 760 aa12.84□□□□□ -0.35
NEDD4L-208ENST00000456173 DDX3XO00571 662 aaKnown RBP eCLIP12.83□□□□□ -0.352e-8■■□□□ 13.6
NEDD4L-208ENST00000456173 ATP6V1E1P36543 226 aa12.83□□□□□ -0.35
NEDD4L-208ENST00000456173 RAD23AP54725 363 aa12.83□□□□□ -0.35
NEDD4L-208ENST00000456173 BMPR2Q13873 1038 aa12.83□□□□□ -0.35
NEDD4L-208ENST00000456173 PARP6Q2NL67 630 aa12.83□□□□□ -0.35
NEDD4L-208ENST00000456173 SMTNL2Q2TAL5 461 aa12.83□□□□□ -0.35
NEDD4L-208ENST00000456173 CNPY1Q3B7I2 92 aa12.83□□□□□ -0.35
NEDD4L-208ENST00000456173 IL31Q6EBC2 164 aa12.83□□□□□ -0.35
NEDD4L-208ENST00000456173 PID1Q7Z2X4 250 aa12.83□□□□□ -0.35
NEDD4L-208ENST00000456173 ILDR1Q86SU0 546 aaPredicted RBP12.83□□□□□ -0.35
NEDD4L-208ENST00000456173 EPB41L4AQ9HCS5 686 aaPredicted RBP12.83□□□□□ -0.35
NEDD4L-208ENST00000456173 PTGES3LE9PB15 166 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 TRMUO75648 421 aaKnown RBP12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 CCDC166P0CW27 439 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 PKNOX1P55347 436 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 LPCAT4Q643R3 524 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 SLC7A3Q8WY07 619 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 SLC16A3O15427 465 aaKnown RBP12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 SOX6P35712 828 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 NME5P56597 212 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 ADAM17P78536 824 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 NDUFA5Q16718 116 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 MTERF2Q49AM1 385 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 TTC27Q6P3X3 843 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 SPATA18Q8TC71 538 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 COX4I2Q96KJ9 171 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 MCEEQ96PE7 176 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 CACNA2D2Q9NY47 1150 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 TSR3Q9UJK0 312 aaKnown RBP12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 C15orf38-AP3S2A0A0A6YYH1 394 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 AGRPO00253 132 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 RARAP10276 462 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 PLIN5Q00G26 463 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 ALX1Q15699 326 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 C2CD6Q53TS8 623 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 FAM102AQ5T9C2 384 aaPredicted RBP12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 ARPINQ7Z6K5 226 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 POC5Q8NA72 575 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 FNIP1Q8TF40 1166 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 FAM162AQ96A26 154 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 SEMA6BQ9H3T3 888 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 TIMMDC1Q9NPL8 285 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 HACD3Q9P035 362 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 C6orf203Q9P0P8 240 aaPredicted RBP12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 ZHX2Q9Y6X8 837 aa12.83□□□□□ -0.36
NEDD4L-208ENST00000456173 DCDC2CA8MYV0 355 aa12.82□□□□□ -0.36
NEDD4L-208ENST00000456173 MATN2O00339 956 aa12.82□□□□□ -0.36
NEDD4L-208ENST00000456173 RTP1P59025 263 aa12.82□□□□□ -0.36
NEDD4L-208ENST00000456173 ITGA9Q13797 1035 aa12.82□□□□□ -0.36
NEDD4L-208ENST00000456173 NEK10Q6ZWH5 1172 aa12.82□□□□□ -0.36
NEDD4L-208ENST00000456173 NCAPG2Q86XI2 1143 aa12.82□□□□□ -0.36
NEDD4L-208ENST00000456173 SLC44A5Q8NCS7 719 aa12.82□□□□□ -0.36
NEDD4L-208ENST00000456173 BORCS5Q969J3 196 aa12.82□□□□□ -0.36
NEDD4L-208ENST00000456173 FSD1LQ9BXM9 530 aa12.82□□□□□ -0.36
NEDD4L-208ENST00000456173 MAD2L2Q9UI95 211 aa12.82□□□□□ -0.36
NEDD4L-208ENST00000456173 MLH3Q9UHC1 1453 aa12.82□□□□□ -0.36
NEDD4L-208ENST00000456173 FAM237BA0A1B0GVD1 139 aa12.82□□□□□ -0.36
NEDD4L-208ENST00000456173 H7C1W4 665 aa12.82□□□□□ -0.36
NEDD4L-208ENST00000456173 FKBP9O95302 570 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms