RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 NOL4O94818 638 aa20.12■□□□□ 0.81
COL20A1-204ENST00000455906 PRPF6O94906 941 aaKnown RBP20.12■□□□□ 0.81
COL20A1-204ENST00000455906 MYL7Q01449 175 aa20.12■□□□□ 0.81
COL20A1-204ENST00000455906 FSTL4Q6MZW2 842 aa20.12■□□□□ 0.81
COL20A1-204ENST00000455906 WDR5BQ86VZ2 330 aa20.12■□□□□ 0.81
COL20A1-204ENST00000455906 SPATA18Q8TC71 538 aa20.12■□□□□ 0.81
COL20A1-204ENST00000455906 MRPS31Q92665 395 aaKnown RBP20.12■□□□□ 0.81
COL20A1-204ENST00000455906 TRMT2BQ96GJ1 504 aaKnown RBP20.12■□□□□ 0.81
COL20A1-204ENST00000455906 MYRFLQ96LU7 910 aa20.12■□□□□ 0.81
COL20A1-204ENST00000455906 RTKNQ9BST9 563 aa20.12■□□□□ 0.81
COL20A1-204ENST00000455906 MTMR12Q9C0I1 747 aa20.12■□□□□ 0.81
COL20A1-204ENST00000455906 GTF3C4Q9UKN8 822 aa20.12■□□□□ 0.81
COL20A1-204ENST00000455906 MTMR6Q9Y217 621 aa20.12■□□□□ 0.81
COL20A1-204ENST00000455906 SNX9Q9Y5X1 595 aa20.12■□□□□ 0.81
COL20A1-204ENST00000455906 PTPRJQ12913 1337 aa20.11■□□□□ 0.81
COL20A1-204ENST00000455906 DCDC2BA2VCK2 349 aa20.11■□□□□ 0.81
COL20A1-204ENST00000455906 TRDMT1O14717 391 aaKnown RBP20.11■□□□□ 0.81
COL20A1-204ENST00000455906 ARSAP15289 507 aa20.11■□□□□ 0.81
COL20A1-204ENST00000455906 RPL10AP62906 217 aaKnown RBP20.11■□□□□ 0.81
COL20A1-204ENST00000455906 ZNF268Q14587 947 aaPredicted RBP20.11■□□□□ 0.81
COL20A1-204ENST00000455906 LMBRD2Q68DH5 695 aaPredicted RBP20.11■□□□□ 0.81
COL20A1-204ENST00000455906 LIMS2Q7Z4I7 341 aa20.11■□□□□ 0.81
COL20A1-204ENST00000455906 GPD1LQ8N335 351 aa20.11■□□□□ 0.81
COL20A1-204ENST00000455906 TOP6BLQ8N6T0 577 aa20.11■□□□□ 0.81
COL20A1-204ENST00000455906 GLIS3Q8NEA6 775 aa20.11■□□□□ 0.81
COL20A1-204ENST00000455906 TMEM206Q9H813 350 aa20.11■□□□□ 0.81
COL20A1-204ENST00000455906 SEMA4GQ9NTN9 838 aa20.11■□□□□ 0.81
COL20A1-204ENST00000455906 EML5Q05BV3 1969 aa20.1■□□□□ 0.81
COL20A1-204ENST00000455906 PTPRDP23468 1912 aa20.1■□□□□ 0.81
COL20A1-204ENST00000455906 KRT19P08727 400 aa20.1■□□□□ 0.81
COL20A1-204ENST00000455906 RBP5P82980 135 aa20.1■□□□□ 0.81
COL20A1-204ENST00000455906 CSRP2Q16527 193 aa20.1■□□□□ 0.81
COL20A1-204ENST00000455906 SOWAHAQ2M3V2 549 aa20.1■□□□□ 0.81
COL20A1-204ENST00000455906 CFAP221Q4G0U5 840 aa20.1■□□□□ 0.81
COL20A1-204ENST00000455906 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.1■□□□□ 0.81
COL20A1-204ENST00000455906 ADGRF2Q8IZF7 708 aa20.1■□□□□ 0.81
COL20A1-204ENST00000455906 FAM160A2Q8N612 972 aaPredicted RBP20.1■□□□□ 0.81
COL20A1-204ENST00000455906 OR5B17Q8NGF7 314 aa20.1■□□□□ 0.81
COL20A1-204ENST00000455906 NOC3LQ8WTT2 800 aaKnown RBP20.1■□□□□ 0.81
COL20A1-204ENST00000455906 SLC22A12Q96S37 553 aa20.1■□□□□ 0.81
COL20A1-204ENST00000455906 FBRSL1Q9HCM7 1045 aaKnown RBP20.1■□□□□ 0.81
COL20A1-204ENST00000455906 INTS13Q9NVM9 706 aa20.1■□□□□ 0.81
COL20A1-204ENST00000455906 UXTQ9UBK9 157 aaPredicted RBP20.1■□□□□ 0.81
COL20A1-204ENST00000455906 TMEM191BP0C7N4 346 aa20.09■□□□□ 0.81
COL20A1-204ENST00000455906 HOXD13P35453 343 aa20.09■□□□□ 0.81
COL20A1-204ENST00000455906 LHX1P48742 406 aa20.09■□□□□ 0.81
COL20A1-204ENST00000455906 NASPP49321 788 aaPredicted RBP20.09■□□□□ 0.81
COL20A1-204ENST00000455906 GRSF1Q12849 480 aaKnown RBP eCLIP20.09■□□□□ 0.81
COL20A1-204ENST00000455906 NAIF1Q69YI7 327 aaPredicted RBP20.09■□□□□ 0.81
COL20A1-204ENST00000455906 FAM171BQ6P995 826 aa20.09■□□□□ 0.81
COL20A1-204ENST00000455906 PRR23CQ6ZRP0 262 aa20.09■□□□□ 0.81
COL20A1-204ENST00000455906 PDILTQ8N807 584 aa20.09■□□□□ 0.81
COL20A1-204ENST00000455906 NETO1Q8TDF5 533 aa20.09■□□□□ 0.81
COL20A1-204ENST00000455906 HPS3Q969F9 1004 aa20.09■□□□□ 0.81
COL20A1-204ENST00000455906 INTS4Q96HW7 963 aaKnown RBP20.09■□□□□ 0.81
COL20A1-204ENST00000455906 FUBP3Q96I24 572 aaKnown RBP eCLIP20.09■□□□□ 0.81
COL20A1-204ENST00000455906 CNOT1A5YKK6 2376 aaKnown RBP20.09■□□□□ 0.81
COL20A1-204ENST00000455906 MYO16Q9Y6X6 1858 aa20.09■□□□□ 0.81
COL20A1-204ENST00000455906 LAMA1P25391 3075 aa20.08■□□□□ 0.81
COL20A1-204ENST00000455906 KIAA0391O15091 583 aaKnown RBP20.08■□□□□ 0.81
COL20A1-204ENST00000455906 EGFP01133 1207 aa20.08■□□□□ 0.81
COL20A1-204ENST00000455906 PCSK1P29120 753 aa20.08■□□□□ 0.81
COL20A1-204ENST00000455906 PXNP49023 591 aaPredicted RBP20.08■□□□□ 0.81
COL20A1-204ENST00000455906 FAM160A1Q05DH4 1040 aa20.08■□□□□ 0.81
COL20A1-204ENST00000455906 MTF1Q14872 753 aa20.08■□□□□ 0.81
COL20A1-204ENST00000455906 PDGFRLQ15198 375 aa20.08■□□□□ 0.81
COL20A1-204ENST00000455906 ZNF77Q15935 545 aa20.08■□□□□ 0.81
COL20A1-204ENST00000455906 E2F4Q16254 413 aa20.08■□□□□ 0.81
COL20A1-204ENST00000455906 CEP68Q76N32 757 aa20.08■□□□□ 0.81
COL20A1-204ENST00000455906 CBWD2Q8IUF1 395 aa20.08■□□□□ 0.81
COL20A1-204ENST00000455906 SPATA2LQ8IUW3 424 aaPredicted RBP20.08■□□□□ 0.81
COL20A1-204ENST00000455906 CCDC65Q8IXS2 484 aa20.08■□□□□ 0.81
COL20A1-204ENST00000455906 KBTBD7Q8WVZ9 684 aa20.08■□□□□ 0.81
COL20A1-204ENST00000455906 ANKRD36BP1Q96IX9 119 aa20.08■□□□□ 0.81
COL20A1-204ENST00000455906 CYP2S1Q96SQ9 504 aa20.08■□□□□ 0.81
COL20A1-204ENST00000455906 KIAA1549LQ6ZVL6 1849 aa20.08■□□□□ 0.8
COL20A1-204ENST00000455906 CACNA1BQ00975 2339 aa20.08■□□□□ 0.8
COL20A1-204ENST00000455906 HELZP42694 1942 aaKnown RBP20.08■□□□□ 0.8
COL20A1-204ENST00000455906 CCDC163A0A0D9SF12 145 aa20.07■□□□□ 0.8
COL20A1-204ENST00000455906 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.07■□□□□ 0.8
COL20A1-204ENST00000455906 SLC30A4O14863 429 aa20.07■□□□□ 0.8
COL20A1-204ENST00000455906 RNF40O75150 1001 aa20.07■□□□□ 0.8
COL20A1-204ENST00000455906 ATP2C2O75185 946 aa20.07■□□□□ 0.8
COL20A1-204ENST00000455906 LMO2P25791 158 aa20.07■□□□□ 0.8
COL20A1-204ENST00000455906 GJA4P35212 333 aa20.07■□□□□ 0.8
COL20A1-204ENST00000455906 MAGEA11P43364 429 aa20.07■□□□□ 0.8
COL20A1-204ENST00000455906 USP4Q13107 963 aa20.07■□□□□ 0.8
COL20A1-204ENST00000455906 CC2D1AQ6P1N0 951 aaPredicted RBP20.07■□□□□ 0.8
COL20A1-204ENST00000455906 DPH6Q7L8W6 267 aa20.07■□□□□ 0.8
COL20A1-204ENST00000455906 SCN4BQ8IWT1 228 aa20.07■□□□□ 0.8
COL20A1-204ENST00000455906 LINC00301Q8NCQ3 95 aa20.07■□□□□ 0.8
COL20A1-204ENST00000455906 OSCP1Q8WVF1 389 aa20.07■□□□□ 0.8
COL20A1-204ENST00000455906 HPDLQ96IR7 371 aa20.07■□□□□ 0.8
COL20A1-204ENST00000455906 TNMDQ9H2S6 317 aa20.07■□□□□ 0.8
COL20A1-204ENST00000455906 ZSCAN16Q9H4T2 348 aaPredicted RBP20.07■□□□□ 0.8
COL20A1-204ENST00000455906 TRPC7Q9HCX4 862 aa20.07■□□□□ 0.8
COL20A1-204ENST00000455906 KBTBD4Q9NVX7 518 aa20.07■□□□□ 0.8
COL20A1-204ENST00000455906 POLR3BQ9NW08 1133 aaPredicted RBP20.07■□□□□ 0.8
COL20A1-204ENST00000455906 GCNT4Q9P109 453 aa20.07■□□□□ 0.8
COL20A1-204ENST00000455906 CHD8Q9HCK8 2581 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms