RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 C4orf50Q6ZRC1 276 aa18.52■□□□□ 0.56
USP39-208ENST00000455732 DNAJB7Q7Z6W7 309 aaPredicted RBP18.52■□□□□ 0.56
USP39-208ENST00000455732 SMYD3Q9H7B4 428 aa18.52■□□□□ 0.56
USP39-208ENST00000455732 CRTAC1Q9NQ79 661 aa18.52■□□□□ 0.56
USP39-208ENST00000455732 LMBRD1Q9NUN5 540 aa18.52■□□□□ 0.56
USP39-208ENST00000455732 NME7Q9Y5B8 376 aa18.52■□□□□ 0.56
USP39-208ENST00000455732 ECI2O75521 394 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 GJA1P17302 382 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 FCARP24071 287 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 MXI1P50539 228 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 CDR1P51861 262 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 NUBP1P53384 320 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 PSMC1P62191 440 aaKnown RBP18.51■□□□□ 0.55
USP39-208ENST00000455732 TCF15Q12870 199 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 PAK1Q13153 545 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 CCDC142Q17RM4 750 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 FAM78AQ5JUQ0 283 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 TANGO2Q6ICL3 276 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 KLHL10Q6JEL2 608 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 SPATA2LQ8IUW3 424 aaPredicted RBP18.51■□□□□ 0.55
USP39-208ENST00000455732 FLCNQ8NFG4 579 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 OR6B3Q8NGW1 331 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 SHKBP1Q8TBC3 707 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 MYCBPAPQ8TBZ2 947 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 TAS1R2Q8TE23 839 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 NELFBQ8WX92 580 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 ZSWIM3Q96MP5 696 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 ASB16Q96NS5 453 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 DUSP9Q99956 384 aaKnown RBP18.51■□□□□ 0.55
USP39-208ENST00000455732 LPIN3Q9BQK8 851 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 PI4K2AQ9BTU6 479 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 PLA2G2FQ9BZM2 168 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 IMPG2Q9BZV3 1241 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 ARMCX3Q9UH62 379 aaPredicted RBP18.51■□□□□ 0.55
USP39-208ENST00000455732 CA14Q9ULX7 337 aa18.51■□□□□ 0.55
USP39-208ENST00000455732 COL4A2P08572 1712 aa18.5■□□□□ 0.55
USP39-208ENST00000455732 PI15O43692 258 aa18.5■□□□□ 0.55
USP39-208ENST00000455732 ATP2C2O75185 946 aa18.5■□□□□ 0.55
USP39-208ENST00000455732 AOC1P19801 751 aa18.5■□□□□ 0.55
USP39-208ENST00000455732 ASPAP45381 313 aa18.5■□□□□ 0.55
USP39-208ENST00000455732 RPL10AP62906 217 aaKnown RBP18.5■□□□□ 0.55
USP39-208ENST00000455732 NOP14P78316 857 aaKnown RBP18.5■□□□□ 0.55
USP39-208ENST00000455732 TEAD2Q15562 447 aa18.5■□□□□ 0.55
USP39-208ENST00000455732 VSTM1Q6UX27 236 aa18.5■□□□□ 0.55
USP39-208ENST00000455732 FRMD5Q7Z6J6 570 aa18.5■□□□□ 0.55
USP39-208ENST00000455732 FILIP1Q7Z7B0 1213 aa18.5■□□□□ 0.55
USP39-208ENST00000455732 MYLPFQ96A32 169 aa18.5■□□□□ 0.55
USP39-208ENST00000455732 ELSPBP1Q96BH3 223 aa18.5■□□□□ 0.55
USP39-208ENST00000455732 FAXDC2Q96IV6 333 aa18.5■□□□□ 0.55
USP39-208ENST00000455732 CEP295NLQ96MC4 621 aa18.5■□□□□ 0.55
USP39-208ENST00000455732 BCO2Q9BYV7 579 aa18.5■□□□□ 0.55
USP39-208ENST00000455732 SDCBP2Q9H190 292 aa18.5■□□□□ 0.55
USP39-208ENST00000455732 METTL14Q9HCE5 456 aaKnown RBP18.5■□□□□ 0.55
USP39-208ENST00000455732 ZNF334Q9HCZ1 680 aaPredicted RBP18.5■□□□□ 0.55
USP39-208ENST00000455732 ARHGEF3Q9NR81 526 aa18.5■□□□□ 0.55
USP39-208ENST00000455732 CTNND2Q9UQB3 1225 aa18.5■□□□□ 0.55
USP39-208ENST00000455732 F5P12259 2224 aa18.5■□□□□ 0.55
USP39-208ENST00000455732 COL4A3Q01955 1670 aa18.5■□□□□ 0.55
USP39-208ENST00000455732 TICRRQ7Z2Z1 1910 aa18.49■□□□□ 0.55
USP39-208ENST00000455732 ANAPC1Q9H1A4 1944 aa18.49■□□□□ 0.55
USP39-208ENST00000455732 A0A1W2PRU2 124 aa18.49■□□□□ 0.55
USP39-208ENST00000455732 A8MXQ7 604 aa18.49■□□□□ 0.55
USP39-208ENST00000455732 CLSTN1O94985 981 aa18.49■□□□□ 0.55
USP39-208ENST00000455732 PDGFRBP09619 1106 aa18.49■□□□□ 0.55
USP39-208ENST00000455732 CYP2F1P24903 491 aa18.49■□□□□ 0.55
USP39-208ENST00000455732 SPOPLQ6IQ16 392 aa18.49■□□□□ 0.55
USP39-208ENST00000455732 SCARA5Q6ZMJ2 495 aa18.49■□□□□ 0.55
USP39-208ENST00000455732 GAREM2Q75VX8 874 aa18.49■□□□□ 0.55
USP39-208ENST00000455732 B3GALNT2Q8NCR0 500 aa18.49■□□□□ 0.55
USP39-208ENST00000455732 FBXL13Q8NEE6 735 aa18.49■□□□□ 0.55
USP39-208ENST00000455732 FAM200AQ8TCP9 573 aa18.49■□□□□ 0.55
USP39-208ENST00000455732 SMARCD2Q92925 531 aa18.49■□□□□ 0.55
USP39-208ENST00000455732 SLC35C1Q96A29 364 aa18.49■□□□□ 0.55
USP39-208ENST00000455732 PCED1BQ96HM7 432 aa18.49■□□□□ 0.55
USP39-208ENST00000455732 GPR88Q9GZN0 384 aa18.49■□□□□ 0.55
USP39-208ENST00000455732 DPEP3Q9H4B8 488 aa18.49■□□□□ 0.55
USP39-208ENST00000455732 TRPV4Q9HBA0 871 aa18.49■□□□□ 0.55
USP39-208ENST00000455732 IL21Q9HBE4 155 aa18.49■□□□□ 0.55
USP39-208ENST00000455732 APOBEC3GQ9HC16 384 aaKnown RBP18.49■□□□□ 0.55
USP39-208ENST00000455732 MAGEC2Q9UBF1 373 aaPredicted RBP18.49■□□□□ 0.55
USP39-208ENST00000455732 CSH1P0DML2 217 aa18.48■□□□□ 0.55
USP39-208ENST00000455732 CSH2P0DML3 217 aa18.48■□□□□ 0.55
USP39-208ENST00000455732 HMGA1P17096 107 aaKnown RBP18.48■□□□□ 0.55
USP39-208ENST00000455732 PTPN1P18031 435 aaKnown RBP18.48■□□□□ 0.55
USP39-208ENST00000455732 RAP1GAPP47736 663 aa18.48■□□□□ 0.55
USP39-208ENST00000455732 CDH8P55286 799 aa18.48■□□□□ 0.55
USP39-208ENST00000455732 INCA1Q0VD86 236 aa18.48■□□□□ 0.55
USP39-208ENST00000455732 DCAF17Q5H9S7 520 aaPredicted RBP18.48■□□□□ 0.55
USP39-208ENST00000455732 MDH1BQ5I0G3 518 aa18.48■□□□□ 0.55
USP39-208ENST00000455732 PHLDB3Q6NSJ2 640 aa18.48■□□□□ 0.55
USP39-208ENST00000455732 UNC93AQ86WB7 457 aa18.48■□□□□ 0.55
USP39-208ENST00000455732 CCDC150Q8NCX0 1101 aa18.48■□□□□ 0.55
USP39-208ENST00000455732 GIPC2Q8TF65 315 aa18.48■□□□□ 0.55
USP39-208ENST00000455732 ELMO3Q96BJ8 720 aa18.48■□□□□ 0.55
USP39-208ENST00000455732 TNIP3Q96KP6 325 aa18.48■□□□□ 0.55
USP39-208ENST00000455732 NIF3L1Q9GZT8 377 aa18.48■□□□□ 0.55
USP39-208ENST00000455732 NUP62CLQ9H1M0 184 aa18.48■□□□□ 0.55
USP39-208ENST00000455732 MMRN2Q9H8L6 949 aa18.48■□□□□ 0.55
USP39-208ENST00000455732 TBC1D17Q9HA65 648 aa18.48■□□□□ 0.55
USP39-208ENST00000455732 CYP3A43Q9HB55 503 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms