RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 FGD4Q96M96 766 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 PNMA3Q9UL41 463 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 C3orf70A6NLC5 250 aaPredicted RBP12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 GPR25O00155 361 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 CNMDO75829 334 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 CTCFP49711 727 aaPredicted RBP12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 YWHAEP62258 255 aaKnown RBP12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 SURF1Q15526 300 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 SNCBQ16143 134 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 CGB2Q6NT52 195 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 RELL1Q8IUW5 271 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 CPB2Q96IY4 423 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 RMDN2Q96LZ7 410 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 C2orf40Q9H1Z8 148 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 TRABDQ9H4I3 376 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 PPP2R3BQ9Y5P8 575 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 LOC285556D6RIA3 1793 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 FAM47DPA6NHR8 397 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 POLR2BP30876 1174 aaKnown RBP12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 CDH5P33151 784 aaPredicted RBP12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 RAD23BP54727 409 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 COPS2P61201 443 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 TAP1Q03518 808 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 MORF4L2Q15014 288 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 DRICH1Q6PGQ1 229 aaPredicted RBP12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 TRABD2AQ86V40 505 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 RFX6Q8HWS3 928 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 PRCCQ92733 491 aaPredicted RBP12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 PCDH9Q9HC56 1237 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 PTPRHQ9HD43 1115 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 STRIP2Q9ULQ0 834 aa12.86□□□□□ -0.35
SEMA4D-213ENST00000455551 IGKV6-21A0A0C4DH24 114 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 LACTBL1A8MY62 500 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 M0QYV0 167 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 DDNO94850 711 aaPredicted RBP12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 ABHD2P08910 425 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 TXNP10599 105 aaKnown RBP12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 PROZP22891 400 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 MBTD1Q05BQ5 628 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 JADE1Q6IE81 842 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 CENPUQ71F23 418 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 CEP57Q86XR8 500 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 KIF2BQ8N4N8 673 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 UBA3Q8TBC4 463 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 NKD2Q969F2 451 aaPredicted RBP12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 CALN1Q9BXU9 219 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 RNPEPQ9H4A4 650 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 DRG1Q9Y295 367 aaKnown RBP12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 SIGLEC16A6NMB1 481 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 B4GALT4O60513 344 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 ITGAVP06756 1048 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 TAC1P20366 129 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 SSTR1P30872 391 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 ELF3P78545 371 aaPredicted RBP12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 DNAJC3Q13217 504 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 TFDP1Q14186 410 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 HIF1AQ16665 826 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 MSS51Q4VC12 460 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 RAB6CQ53S08 254 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 FAM228AQ86W67 206 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 NIPA2Q8N8Q9 360 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 KCTD6Q8NC69 237 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 SLC35B2Q8TB61 432 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 RSAD2Q8WXG1 361 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 MAGEB18Q96M61 343 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 ELOVL4Q9GZR5 314 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 RAB6CQ9H0N0 254 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 FZD8Q9H461 694 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 BAIAP2L1Q9UHR4 511 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 A0A1W2PPM1 405 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 LGR5O75473 907 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 KCNJ2P63252 427 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 TTLL12Q14166 644 aaPredicted RBP12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 KCTD2Q14681 263 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 PPP1R21Q6ZMI0 780 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 XYLT1Q86Y38 959 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 SLC4A11Q8NBS3 891 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 TTC25Q96NG3 672 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 FOXP3Q9BZS1 431 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 ECT2Q9H8V3 914 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 ARL2BPQ9Y2Y0 163 aa12.85□□□□□ -0.35
SEMA4D-213ENST00000455551 TCRBV7S3A2A0A539 114 aa12.84□□□□□ -0.35
SEMA4D-213ENST00000455551 GRAP2O75791 330 aa12.84□□□□□ -0.35
SEMA4D-213ENST00000455551 STAG3L1P0CL83 205 aa12.84□□□□□ -0.35
SEMA4D-213ENST00000455551 KDELR1P24390 212 aa12.84□□□□□ -0.35
SEMA4D-213ENST00000455551 IL9RQ01113 521 aa12.84□□□□□ -0.35
SEMA4D-213ENST00000455551 PTPN11Q06124 597 aaPredicted RBP12.84□□□□□ -0.35
SEMA4D-213ENST00000455551 R3HDM1Q15032 1099 aaKnown RBP12.84□□□□□ -0.35
SEMA4D-213ENST00000455551 E2F5Q15329 346 aa12.84□□□□□ -0.35
SEMA4D-213ENST00000455551 HADHQ16836 314 aaKnown RBP12.84□□□□□ -0.35
SEMA4D-213ENST00000455551 FNBP1LQ5T0N5 605 aa12.84□□□□□ -0.35
SEMA4D-213ENST00000455551 SH3PXD2AQ5TCZ1 1133 aa12.84□□□□□ -0.35
SEMA4D-213ENST00000455551 UNC45BQ8IWX7 931 aa12.84□□□□□ -0.35
SEMA4D-213ENST00000455551 GPC2Q8N158 579 aa12.84□□□□□ -0.35
SEMA4D-213ENST00000455551 FAM71DQ8N9W8 422 aa12.84□□□□□ -0.35
SEMA4D-213ENST00000455551 MMP19Q99542 508 aa12.84□□□□□ -0.35
SEMA4D-213ENST00000455551 PITPNM3Q9BZ71 974 aa12.84□□□□□ -0.35
SEMA4D-213ENST00000455551 SLCO1B3Q9NPD5 702 aa12.84□□□□□ -0.35
SEMA4D-213ENST00000455551 A0A087WZ62 844 aa12.84□□□□□ -0.35
SEMA4D-213ENST00000455551 MED7O43513 233 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms