RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 NBL1P41271 181 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 MAGEA11P43364 429 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 CASP4P49662 377 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 GPR15P49685 360 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 NLRP12P59046 1061 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 MYL6P60660 151 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 PSMC1P62191 440 aaKnown RBP11.42□□□□□ -0.58
DDX39A-203ENST00000454233 CYP27A1Q02318 531 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 KCNB1Q14721 858 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 ARHGAP29Q52LW3 1261 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 SDHAF4Q5VUM1 108 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 CEP135Q66GS9 1140 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 FAM171BQ6P995 826 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 VSTM1Q6UX27 236 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 GPIHBP1Q8IV16 184 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 C1orf210Q8IVY1 113 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 TMC2Q8TDI7 906 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 MKNK1Q9BUB5 465 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 GZF1Q9H116 711 aaPredicted RBP11.42□□□□□ -0.58
DDX39A-203ENST00000454233 THG1LQ9NWX6 298 aaKnown RBP11.42□□□□□ -0.58
DDX39A-203ENST00000454233 NXF1Q9UBU9 619 aaKnown RBP11.42□□□□□ -0.58
DDX39A-203ENST00000454233 TRAF3IP3Q9Y228 551 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 PIAS3Q9Y6X2 628 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 NCANO14594 1321 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 MIA3Q5JRA6 1907 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 SLC38A8A6NNN8 435 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 LRRIQ3A6PVS8 624 aaPredicted RBP11.41□□□□□ -0.58
DDX39A-203ENST00000454233 SOBPA7XYQ1 873 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 A8MXQ7 604 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 PROB1E7EW31 1015 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 GFRA3O60609 400 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 LRRN2O75325 713 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 NOL4O94818 638 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 PRAMEF12O95522 483 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 F11P03951 625 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 RPL13P26373 211 aaKnown RBP11.41□□□□□ -0.58
DDX39A-203ENST00000454233 TARSP26639 723 aaKnown RBP11.41□□□□□ -0.58
DDX39A-203ENST00000454233 ANXA13P27216 316 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 KPNA1P52294 538 aaPredicted RBP11.41□□□□□ -0.58
DDX39A-203ENST00000454233 CLDN10P78369 228 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 PLCB2Q00722 1185 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 FCHO2Q0JRZ9 810 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 NCOA4Q13772 614 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 CCDC142Q17RM4 750 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 ZNF699Q32M78 642 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 ZNF667Q5HYK9 610 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 TDRD10Q5VZ19 366 aaKnown RBP11.41□□□□□ -0.58
DDX39A-203ENST00000454233 C1orf228Q6PIY5 440 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 CMTM8Q8IZV2 173 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 GUF1Q8N442 669 aaKnown RBP11.41□□□□□ -0.58
DDX39A-203ENST00000454233 CELF5Q8N6W0 485 aaKnown RBP11.41□□□□□ -0.58
DDX39A-203ENST00000454233 MAB21L3Q8N8X9 362 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 STKLD1Q8NE28 680 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 MYCBPAPQ8TBZ2 947 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 PLEKHO2Q8TD55 490 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 BPIFB1Q8TDL5 484 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 FAM3CQ92520 227 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 MYLPFQ96A32 169 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 RSPRY1Q96DX4 576 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 TRMT2BQ96GJ1 504 aaKnown RBP11.41□□□□□ -0.58
DDX39A-203ENST00000454233 MSANTD3Q96H12 275 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 CEP295NLQ96MC4 621 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 MRPL45Q9BRJ2 306 aaKnown RBP11.41□□□□□ -0.58
DDX39A-203ENST00000454233 SLC46A2Q9BY10 475 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 CRTAC1Q9NQ79 661 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 SPATA6Q9NWH7 488 aaPredicted RBP11.41□□□□□ -0.58
DDX39A-203ENST00000454233 NDRG2Q9UN36 371 aaKnown RBP11.41□□□□□ -0.58
DDX39A-203ENST00000454233 MAPK8IP1Q9UQF2 711 aa11.41□□□□□ -0.58
DDX39A-203ENST00000454233 MTF2Q9Y483 593 aaPredicted RBP11.41□□□□□ -0.58
DDX39A-203ENST00000454233 IKBKBO14920 756 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 TRIM66O15016 1216 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 MAPK13O15264 365 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 LAMTOR5O43504 91 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 C4BPAP04003 597 aaKnown RBP11.4□□□□□ -0.58
DDX39A-203ENST00000454233 KRT13P13646 458 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 P4HA1P13674 534 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 PTPN1P18031 435 aaKnown RBP11.4□□□□□ -0.58
DDX39A-203ENST00000454233 BDNFP23560 247 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 NR2F2P24468 414 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 GRIK1P39086 918 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 RPS9P46781 194 aaKnown RBP11.4□□□□□ -0.58
DDX39A-203ENST00000454233 MLLT6P55198 1093 aaPredicted RBP11.4□□□□□ -0.58
DDX39A-203ENST00000454233 NFIL3Q16649 462 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 SGSM1Q2NKQ1 1148 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 MDH1BQ5I0G3 518 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 TXNDC8Q6A555 127 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 ZC3H14Q6PJT7 736 aaKnown RBP11.4□□□□□ -0.58
DDX39A-203ENST00000454233 FRMD5Q7Z6J6 570 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 TMEM150AQ86TG1 271 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 MON1AQ86VX9 555 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 NKD2Q969F2 451 aaPredicted RBP11.4□□□□□ -0.58
DDX39A-203ENST00000454233 CLDN23Q96B33 292 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 PCED1BQ96HM7 432 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 SPATA17Q96L03 361 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 MYRFLQ96LU7 910 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 XYLT2Q9H1B5 865 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 C8orf33Q9H7E9 229 aaPredicted RBP11.4□□□□□ -0.58
DDX39A-203ENST00000454233 VRTNQ9H8Y1 702 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 KIF9Q9HAQ2 790 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 RMND1Q9NWS8 449 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms