RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 TBC1D17Q9HA65 648 aa15.57■□□□□ 0.08
HSPG2-207ENST00000453796 NXF1Q9UBU9 619 aaKnown RBP15.57■□□□□ 0.08
HSPG2-207ENST00000453796 PATJQ8NI35 1801 aa15.57■□□□□ 0.08
HSPG2-207ENST00000453796 SHISA7A6NL88 538 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 HEPACAM2A8MVW5 462 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 GALR2O43603 387 aaPredicted RBP15.56■□□□□ 0.08
HSPG2-207ENST00000453796 TADA3O75528 432 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 NOL4O94818 638 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 PSMC3P17980 439 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 RPL13P26373 211 aaKnown RBP15.56■□□□□ 0.08
HSPG2-207ENST00000453796 PSMC2P35998 433 aaKnown RBP15.56■□□□□ 0.08
HSPG2-207ENST00000453796 GNL1P36915 607 aaPredicted RBP15.56■□□□□ 0.08
HSPG2-207ENST00000453796 NLRP12P59046 1061 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 RPL10AP62906 217 aaKnown RBP15.56■□□□□ 0.08
HSPG2-207ENST00000453796 PFKPQ01813 784 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 PPP3CAQ08209 521 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 ADAM9Q13443 819 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 GRM2Q14416 872 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 MAPRE1Q15691 268 aaKnown RBP15.56■□□□□ 0.08
HSPG2-207ENST00000453796 MLF2Q15773 248 aaPredicted RBP15.56■□□□□ 0.08
HSPG2-207ENST00000453796 ZNF667Q5HYK9 610 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 GPR158Q5T848 1215 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 C4orf50Q6ZRC1 276 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 INTS8Q75QN2 995 aaKnown RBP15.56■□□□□ 0.08
HSPG2-207ENST00000453796 ARID3BQ8IVW6 561 aaPredicted RBP15.56■□□□□ 0.08
HSPG2-207ENST00000453796 MFSD6LQ8IWD5 586 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 ZC3H3Q8IXZ2 948 aaKnown RBP15.56■□□□□ 0.08
HSPG2-207ENST00000453796 FAM186BQ8IYM0 893 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 OR6B3Q8NGW1 331 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 MYCBPAPQ8TBZ2 947 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 DEPDC1BQ8WUY9 529 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 SMARCE1Q969G3 411 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 TRMT2BQ96GJ1 504 aaKnown RBP15.56■□□□□ 0.08
HSPG2-207ENST00000453796 PCED1BQ96HM7 432 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 MYRFLQ96LU7 910 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 SDCBP2Q9H190 292 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 SNX25Q9H3E2 840 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 DPEP3Q9H4B8 488 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 SLITRK6Q9H5Y7 841 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 TASP1Q9H6P5 420 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 MAGEC2Q9UBF1 373 aaPredicted RBP15.56■□□□□ 0.08
HSPG2-207ENST00000453796 CACNA1HO95180 2353 aa15.56■□□□□ 0.08
HSPG2-207ENST00000453796 SLC38A8A6NNN8 435 aa15.55■□□□□ 0.08
HSPG2-207ENST00000453796 ARNTLO00327 626 aa15.55■□□□□ 0.08
HSPG2-207ENST00000453796 SMC2O95347 1197 aa15.55■□□□□ 0.08
HSPG2-207ENST00000453796 ASS1P00966 412 aaKnown RBP15.55■□□□□ 0.08
HSPG2-207ENST00000453796 HLA-DRAP01903 254 aa15.55■□□□□ 0.08
HSPG2-207ENST00000453796 TRIM49P0CI25 452 aa15.55■□□□□ 0.08
HSPG2-207ENST00000453796 TRIM49CP0CI26 452 aa15.55■□□□□ 0.08
HSPG2-207ENST00000453796 PTPN1P18031 435 aaKnown RBP15.55■□□□□ 0.08
HSPG2-207ENST00000453796 BDNFP23560 247 aa15.55■□□□□ 0.08
HSPG2-207ENST00000453796 PMS1P54277 932 aaKnown RBP15.55■□□□□ 0.08
HSPG2-207ENST00000453796 PTPN5P54829 565 aa15.55■□□□□ 0.08
HSPG2-207ENST00000453796 CDH8P55286 799 aa15.55■□□□□ 0.08
HSPG2-207ENST00000453796 PRKCQQ04759 706 aa15.55■□□□□ 0.08
HSPG2-207ENST00000453796 SGSM1Q2NKQ1 1148 aa15.55■□□□□ 0.08
HSPG2-207ENST00000453796 ARHGAP15Q53QZ3 475 aa15.55■□□□□ 0.08
HSPG2-207ENST00000453796 MDH1BQ5I0G3 518 aa15.55■□□□□ 0.08
HSPG2-207ENST00000453796 VSTM1Q6UX27 236 aa15.55■□□□□ 0.08
HSPG2-207ENST00000453796 ADSSL1Q8N142 457 aa15.55■□□□□ 0.08
HSPG2-207ENST00000453796 TAF4BQ92750 862 aa15.55■□□□□ 0.08
HSPG2-207ENST00000453796 DNASE1L2Q92874 299 aa15.55■□□□□ 0.08
HSPG2-207ENST00000453796 E2F7Q96AV8 911 aa15.55■□□□□ 0.08
HSPG2-207ENST00000453796 LRRC3BQ96PB8 259 aa15.55■□□□□ 0.08
HSPG2-207ENST00000453796 TRMT61BQ9BVS5 477 aaKnown RBP15.55■□□□□ 0.08
HSPG2-207ENST00000453796 SLC46A2Q9BY10 475 aa15.55■□□□□ 0.08
HSPG2-207ENST00000453796 TRPV5Q9NQA5 729 aa15.55■□□□□ 0.08
HSPG2-207ENST00000453796 DLGAP2Q9P1A6 1054 aa15.55■□□□□ 0.08
HSPG2-207ENST00000453796 F5P12259 2224 aa15.54■□□□□ 0.08
HSPG2-207ENST00000453796 A8MXQ7 604 aa15.54■□□□□ 0.08
HSPG2-207ENST00000453796 PRAMEF12O95522 483 aa15.54■□□□□ 0.08
HSPG2-207ENST00000453796 RAP1GAPP47736 663 aa15.54■□□□□ 0.08
HSPG2-207ENST00000453796 FCHO2Q0JRZ9 810 aa15.54■□□□□ 0.08
HSPG2-207ENST00000453796 TAF12Q16514 161 aa15.54■□□□□ 0.08
HSPG2-207ENST00000453796 SPOPLQ6IQ16 392 aa15.54■□□□□ 0.08
HSPG2-207ENST00000453796 CCDC105Q8IYK2 499 aa15.54■□□□□ 0.08
HSPG2-207ENST00000453796 B3GALNT2Q8NCR0 500 aa15.54■□□□□ 0.08
HSPG2-207ENST00000453796 PJA1Q8NG27 643 aa15.54■□□□□ 0.08
HSPG2-207ENST00000453796 EEF2KMTQ96G04 330 aa15.54■□□□□ 0.08
HSPG2-207ENST00000453796 SHDQ96IW2 340 aa15.54■□□□□ 0.08
HSPG2-207ENST00000453796 SPATA17Q96L03 361 aa15.54■□□□□ 0.08
HSPG2-207ENST00000453796 CEP295NLQ96MC4 621 aa15.54■□□□□ 0.08
HSPG2-207ENST00000453796 GTPBP4Q9BZE4 634 aaKnown RBP15.54■□□□□ 0.08
HSPG2-207ENST00000453796 FOXQ1Q9C009 403 aa15.54■□□□□ 0.08
HSPG2-207ENST00000453796 BRD9Q9H8M2 597 aa15.54■□□□□ 0.08
HSPG2-207ENST00000453796 HEBP1Q9NRV9 189 aa15.54■□□□□ 0.08
HSPG2-207ENST00000453796 TMEM30AQ9NV96 361 aa15.54■□□□□ 0.08
HSPG2-207ENST00000453796 OBP2AQ9NY56 170 aa15.54■□□□□ 0.08
HSPG2-207ENST00000453796 CHMP5Q9NZZ3 219 aa15.54■□□□□ 0.08
HSPG2-207ENST00000453796 UXTQ9UBK9 157 aaPredicted RBP15.54■□□□□ 0.08
HSPG2-207ENST00000453796 ZMYM5Q9UJ78 669 aa15.54■□□□□ 0.08
HSPG2-207ENST00000453796 HOOK1Q9UJC3 728 aaKnown RBP15.54■□□□□ 0.08
HSPG2-207ENST00000453796 MAN1B1Q9UKM7 699 aa15.54■□□□□ 0.08
HSPG2-207ENST00000453796 MAGED2Q9UNF1 606 aaPredicted RBP15.54■□□□□ 0.08
HSPG2-207ENST00000453796 KANSL1LA0AUZ9 987 aa15.53■□□□□ 0.08
HSPG2-207ENST00000453796 SOBPA7XYQ1 873 aa15.53■□□□□ 0.08
HSPG2-207ENST00000453796 KINO60870 393 aaKnown RBP15.53■□□□□ 0.08
HSPG2-207ENST00000453796 KRT13P13646 458 aa15.53■□□□□ 0.08
HSPG2-207ENST00000453796 CD44P16070 742 aaKnown RBP15.53■□□□□ 0.08
HSPG2-207ENST00000453796 BMP6P22004 513 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms