RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 AXIN1O15169 862 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 HUS1O60921 280 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 RPP40O75818 363 aaKnown RBP12.55□□□□□ -0.4
GARNL3-210ENST00000453030 EGFP01133 1207 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 CKMP06732 381 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 CCDC192P0DO97 292 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 GAP43P17677 238 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 CYP2F1P24903 491 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 MYL7Q01449 175 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 POU5F1Q01860 360 aaKnown RBP12.55□□□□□ -0.4
GARNL3-210ENST00000453030 MTF1Q14872 753 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 SF3A2Q15428 464 aaKnown RBP12.55□□□□□ -0.4
GARNL3-210ENST00000453030 AASDHQ4L235 1098 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-210ENST00000453030 TMEM196Q5HYL7 178 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 INTS6LQ5JSJ4 861 aaKnown RBP12.55□□□□□ -0.4
GARNL3-210ENST00000453030 LMBRD2Q68DH5 695 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-210ENST00000453030 CC2D1AQ6P1N0 951 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-210ENST00000453030 FAM173BQ6P4H8 233 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 SV2BQ7L1I2 683 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 OSTM1Q86WC4 334 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 ADGRF2Q8IZF7 708 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 SYCP3Q8IZU3 236 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 LEO1Q8WVC0 666 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-210ENST00000453030 DNAJC19Q96DA6 116 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 HHIPQ96QV1 700 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 CBWD1Q9BRT8 395 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 STRA6Q9BX79 667 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 PCIF1Q9H4Z3 704 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 SLC8A2Q9UPR5 921 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 SNX9Q9Y5X1 595 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 CEP295Q9C0D2 2601 aa12.55□□□□□ -0.4
GARNL3-210ENST00000453030 ADRB1P08588 477 aa12.54□□□□□ -0.4
GARNL3-210ENST00000453030 TMEM191BP0C7N4 346 aa12.54□□□□□ -0.4
GARNL3-210ENST00000453030 HOXA6P31267 233 aa12.54□□□□□ -0.4
GARNL3-210ENST00000453030 STAT6P42226 847 aa12.54□□□□□ -0.4
GARNL3-210ENST00000453030 RPL10AP62906 217 aaKnown RBP12.54□□□□□ -0.4
GARNL3-210ENST00000453030 KBTBD6Q86V97 674 aa12.54□□□□□ -0.4
GARNL3-210ENST00000453030 MON1AQ86VX9 555 aa12.54□□□□□ -0.4
GARNL3-210ENST00000453030 SCN4BQ8IWT1 228 aa12.54□□□□□ -0.4
GARNL3-210ENST00000453030 CSGALNACT2Q8N6G5 542 aa12.54□□□□□ -0.4
GARNL3-210ENST00000453030 C12orf50Q8NA57 414 aaPredicted RBP12.54□□□□□ -0.4
GARNL3-210ENST00000453030 GAB3Q8WWW8 586 aa12.54□□□□□ -0.4
GARNL3-210ENST00000453030 ACBD6Q9BR61 282 aa12.54□□□□□ -0.4
GARNL3-210ENST00000453030 ARRDC1-AS1Q9H2J1 176 aa12.54□□□□□ -0.4
GARNL3-210ENST00000453030 PDE11AQ9HCR9 933 aa12.54□□□□□ -0.4
GARNL3-210ENST00000453030 ABCB6Q9NP58 842 aa12.54□□□□□ -0.4
GARNL3-210ENST00000453030 UXTQ9UBK9 157 aaPredicted RBP12.54□□□□□ -0.4
GARNL3-210ENST00000453030 GTF3C4Q9UKN8 822 aa12.54□□□□□ -0.4
GARNL3-210ENST00000453030 ITGA11Q9UKX5 1188 aa12.54□□□□□ -0.4
GARNL3-210ENST00000453030 SRPRBQ9Y5M8 271 aaKnown RBP12.54□□□□□ -0.4
GARNL3-210ENST00000453030 WNT6Q9Y6F9 365 aa12.54□□□□□ -0.4
GARNL3-210ENST00000453030 MYO18AQ92614 2054 aaKnown RBP12.53□□□□□ -0.4
GARNL3-210ENST00000453030 CFAP47Q6ZTR5 3102 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 FRYQ5TBA9 3013 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 A0A087X0B3 334 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 TRDMT1O14717 391 aaKnown RBP12.53□□□□□ -0.4
GARNL3-210ENST00000453030 NOL4O94818 638 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 PRPF6O94906 941 aaKnown RBP12.53□□□□□ -0.4
GARNL3-210ENST00000453030 LDHAP00338 332 aaKnown RBP12.53□□□□□ -0.4
GARNL3-210ENST00000453030 GARTP22102 1010 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 GJA4P35212 333 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 IFNAR2P48551 515 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 PSMC1P62191 440 aaKnown RBP12.53□□□□□ -0.4
GARNL3-210ENST00000453030 FAM160A1Q05DH4 1040 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 USP4Q13107 963 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 RESTQ13127 1097 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 PDGFRLQ15198 375 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 ZNF77Q15935 545 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 SPATA2LQ8IUW3 424 aaPredicted RBP12.53□□□□□ -0.4
GARNL3-210ENST00000453030 TMEM86AQ8N2M4 240 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 CPA6Q8N4T0 437 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 LRRC52Q8N7C0 313 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 RPLP0P6Q8NHW5 317 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 CACTINQ8WUQ7 758 aaKnown RBP12.53□□□□□ -0.4
GARNL3-210ENST00000453030 TRMT2BQ96GJ1 504 aaKnown RBP12.53□□□□□ -0.4
GARNL3-210ENST00000453030 SLC22A12Q96S37 553 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 PKMYT1Q99640 499 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 P2RY13Q9BPV8 354 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 PANK2Q9BZ23 570 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 SMOC1Q9H4F8 434 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 FBRSL1Q9HCM7 1045 aaKnown RBP12.53□□□□□ -0.4
GARNL3-210ENST00000453030 OLFML3Q9NRN5 406 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 SIX4Q9UIU6 781 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 PCDHB13Q9Y5F0 798 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 ZFHX4Q86UP3 3567 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 PTPRJQ12913 1337 aa12.53□□□□□ -0.4
GARNL3-210ENST00000453030 TRAV19A0A0A6YYK7 116 aa12.52□□□□□ -0.41
GARNL3-210ENST00000453030 C2orf78A6NCI8 922 aa12.52□□□□□ -0.41
GARNL3-210ENST00000453030 ATG13O75143 517 aa12.52□□□□□ -0.41
GARNL3-210ENST00000453030 KRT37O76014 449 aa12.52□□□□□ -0.41
GARNL3-210ENST00000453030 EPN2O95208 641 aa12.52□□□□□ -0.41
GARNL3-210ENST00000453030 PDCP20941 246 aa12.52□□□□□ -0.41
GARNL3-210ENST00000453030 PCSK1P29120 753 aa12.52□□□□□ -0.41
GARNL3-210ENST00000453030 GALK1P51570 392 aa12.52□□□□□ -0.41
GARNL3-210ENST00000453030 AMPD2Q01433 879 aa12.52□□□□□ -0.41
GARNL3-210ENST00000453030 PSMD2Q13200 908 aa12.52□□□□□ -0.41
GARNL3-210ENST00000453030 ALCAMQ13740 583 aa12.52□□□□□ -0.41
GARNL3-210ENST00000453030 ZNF268Q14587 947 aaPredicted RBP12.52□□□□□ -0.41
GARNL3-210ENST00000453030 KCNB1Q14721 858 aa12.52□□□□□ -0.41
GARNL3-210ENST00000453030 IL31Q6EBC2 164 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms