RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 KARSQ15046 597 aaKnown RBP12.55□□□□□ -0.4
HERC3-207ENST00000452979 POSTNQ15063 836 aa12.55□□□□□ -0.4
HERC3-207ENST00000452979 PDCL2Q8N4E4 241 aa12.55□□□□□ -0.4
HERC3-207ENST00000452979 CPA6Q8N4T0 437 aa12.55□□□□□ -0.4
HERC3-207ENST00000452979 OSCP1Q8WVF1 389 aa12.55□□□□□ -0.4
HERC3-207ENST00000452979 HVCN1Q96D96 273 aa12.55□□□□□ -0.4
HERC3-207ENST00000452979 ZNF560Q96MR9 790 aa12.55□□□□□ -0.4
HERC3-207ENST00000452979 PI4K2AQ9BTU6 479 aa12.55□□□□□ -0.4
HERC3-207ENST00000452979 ZHX3Q9H4I2 956 aa12.55□□□□□ -0.4
HERC3-207ENST00000452979 TMEM206Q9H813 350 aa12.55□□□□□ -0.4
HERC3-207ENST00000452979 MAGED2Q9UNF1 606 aaPredicted RBP12.55□□□□□ -0.4
HERC3-207ENST00000452979 NUP205Q92621 2012 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 BCLAF3A2AJT9 711 aaKnown RBP12.54□□□□□ -0.4
HERC3-207ENST00000452979 TBCAO75347 108 aaKnown RBP12.54□□□□□ -0.4
HERC3-207ENST00000452979 TADA3O75528 432 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 PPP1R37O75864 691 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 APBB3O95704 486 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 HSP90AA1P07900 732 aaKnown RBP12.54□□□□□ -0.4
HERC3-207ENST00000452979 USP17L7P0C7H9 530 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 TCF3P15923 654 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 PLCG1P19174 1290 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 KCNA4P22459 653 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 DMC1Q14565 340 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 ELF2Q15723 593 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 ZNF77Q15935 545 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 DDR2Q16832 855 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 EML3Q32P44 896 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 INTS6LQ5JSJ4 861 aaKnown RBP12.54□□□□□ -0.4
HERC3-207ENST00000452979 RNF43Q68DV7 783 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 NAIF1Q69YI7 327 aaPredicted RBP12.54□□□□□ -0.4
HERC3-207ENST00000452979 TMEM86AQ8N2M4 240 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 RPLP0P6Q8NHW5 317 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 CXorf38Q8TB03 319 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 SPATA18Q8TC71 538 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 LARP4BQ92615 738 aaKnown RBP12.54□□□□□ -0.4
HERC3-207ENST00000452979 CD101Q93033 1021 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 HHIPQ96QV1 700 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 SLC22A12Q96S37 553 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 CYP2S1Q96SQ9 504 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 IKZF4Q9H2S9 585 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 SMOC1Q9H4F8 434 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 DUS2Q9NX74 493 aaKnown RBP12.54□□□□□ -0.4
HERC3-207ENST00000452979 GDAP2Q9NXN4 497 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 DDX43Q9NXZ2 648 aaKnown RBP12.54□□□□□ -0.4
HERC3-207ENST00000452979 GCNT4Q9P109 453 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 L1RE1Q9UN81 338 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 HELZP42694 1942 aaKnown RBP12.54□□□□□ -0.4
HERC3-207ENST00000452979 SDK1Q7Z5N4 2213 aa12.54□□□□□ -0.4
HERC3-207ENST00000452979 TRAV19A0A0A6YYK7 116 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 H3BQV1 296 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 GABRDO14764 452 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 DCLK1O15075 740 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 HUS1O60921 280 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 CAVIN2O95810 425 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 PROS1P07225 676 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 CYP2F1P24903 491 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 GRIN1Q05586 938 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 PKP1Q13835 747 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 CFAP221Q4G0U5 840 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 SDHAF4Q5VUM1 108 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 TCEAL6Q6IPX3 200 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 C11orf74Q86VG3 221 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 LRRC52Q8N7C0 313 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 STKLD1Q8NE28 680 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 CCDC26Q8TAB7 109 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 POMGNT1Q8WZA1 660 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 ATP2A3Q93084 1043 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 TCEAL3Q969E4 200 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 ACDQ96AP0 544 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 GTF3C4Q9UKN8 822 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 AGAP1Q9UPQ3 857 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 CNOT1A5YKK6 2376 aaKnown RBP12.53□□□□□ -0.4
HERC3-207ENST00000452979 CHD6Q8TD26 2715 aa12.53□□□□□ -0.4
HERC3-207ENST00000452979 BMP15O95972 392 aa12.52□□□□□ -0.41
HERC3-207ENST00000452979 ITGB3P05106 788 aa12.52□□□□□ -0.41
HERC3-207ENST00000452979 POLR2BP30876 1174 aaKnown RBP12.52□□□□□ -0.41
HERC3-207ENST00000452979 IFNAR2P48551 515 aa12.52□□□□□ -0.41
HERC3-207ENST00000452979 WNT7BP56706 349 aa12.52□□□□□ -0.41
HERC3-207ENST00000452979 MYL7Q01449 175 aa12.52□□□□□ -0.41
HERC3-207ENST00000452979 CREB5Q02930 508 aa12.52□□□□□ -0.41
HERC3-207ENST00000452979 USP4Q13107 963 aa12.52□□□□□ -0.41
HERC3-207ENST00000452979 NR1H3Q13133 447 aa12.52□□□□□ -0.41
HERC3-207ENST00000452979 SCARA3Q6AZY7 606 aa12.52□□□□□ -0.41
HERC3-207ENST00000452979 PSAPL1Q6NUJ1 521 aa12.52□□□□□ -0.41
HERC3-207ENST00000452979 FAM171BQ6P995 826 aa12.52□□□□□ -0.41
HERC3-207ENST00000452979 RASSF3Q86WH2 238 aa12.52□□□□□ -0.41
HERC3-207ENST00000452979 BRSK2Q8IWQ3 736 aa12.52□□□□□ -0.41
HERC3-207ENST00000452979 TOP6BLQ8N6T0 577 aa12.52□□□□□ -0.41
HERC3-207ENST00000452979 KIAA1958Q8N8K9 716 aa12.52□□□□□ -0.41
HERC3-207ENST00000452979 C1orf127Q8N9H9 656 aa12.52□□□□□ -0.41
HERC3-207ENST00000452979 KRI1Q8N9T8 703 aaKnown RBP12.52□□□□□ -0.41
HERC3-207ENST00000452979 CACTINQ8WUQ7 758 aaKnown RBP12.52□□□□□ -0.41
HERC3-207ENST00000452979 FUBP3Q96I24 572 aaKnown RBP eCLIP12.52□□□□□ -0.41
HERC3-207ENST00000452979 IPO9Q96P70 1041 aaKnown RBP12.52□□□□□ -0.41
HERC3-207ENST00000452979 FAM213AQ9BRX8 229 aa12.52□□□□□ -0.41
HERC3-207ENST00000452979 EDEM2Q9BV94 578 aa12.52□□□□□ -0.41
HERC3-207ENST00000452979 SEL1LQ9UBV2 794 aa12.52□□□□□ -0.41
HERC3-207ENST00000452979 WASF3Q9UPY6 502 aa12.52□□□□□ -0.41
HERC3-207ENST00000452979 WNT6Q9Y6F9 365 aa12.52□□□□□ -0.41
HERC3-207ENST00000452979 PTPRDP23468 1912 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms