RNA–Protein interactions for RNA: ENST00000452955.1

IMP4-205, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-205ENST00000452955 PXNP49023 591 aaPredicted RBP12.88□□□□□ -0.35
IMP4-205ENST00000452955 FOXK2Q01167 660 aa12.88□□□□□ -0.35
IMP4-205ENST00000452955 SPEM2Q0P670 501 aa12.88□□□□□ -0.35
IMP4-205ENST00000452955 IFRD2Q12894 506 aaPredicted RBP12.88□□□□□ -0.35
IMP4-205ENST00000452955 TRPC3Q13507 836 aa12.88□□□□□ -0.35
IMP4-205ENST00000452955 RUNX3Q13761 415 aa12.88□□□□□ -0.35
IMP4-205ENST00000452955 GAS6Q14393 721 aa12.88□□□□□ -0.35
IMP4-205ENST00000452955 SOWAHAQ2M3V2 549 aa12.88□□□□□ -0.35
IMP4-205ENST00000452955 C1orf228Q6PIY5 440 aa12.88□□□□□ -0.35
IMP4-205ENST00000452955 SHC4Q6S5L8 630 aa12.88□□□□□ -0.35
IMP4-205ENST00000452955 MON1AQ86VX9 555 aa12.88□□□□□ -0.35
IMP4-205ENST00000452955 ZNF687Q8N1G0 1237 aa12.88□□□□□ -0.35
IMP4-205ENST00000452955 SPEM1Q8N4L4 309 aa12.88□□□□□ -0.35
IMP4-205ENST00000452955 OR6B3Q8NGW1 331 aa12.88□□□□□ -0.35
IMP4-205ENST00000452955 USP13Q92995 863 aaPredicted RBP12.88□□□□□ -0.35
IMP4-205ENST00000452955 MSANTD3Q96H12 275 aa12.88□□□□□ -0.35
IMP4-205ENST00000452955 SYT15Q9BQS2 421 aa12.88□□□□□ -0.35
IMP4-205ENST00000452955 FAM126AQ9BYI3 521 aaPredicted RBP12.88□□□□□ -0.35
IMP4-205ENST00000452955 TRIM9Q9C026 710 aa12.88□□□□□ -0.35
IMP4-205ENST00000452955 SLC39A2Q9NP94 309 aa12.88□□□□□ -0.35
IMP4-205ENST00000452955 PRMT8Q9NR22 394 aaPredicted RBP12.88□□□□□ -0.35
IMP4-205ENST00000452955 TDP1Q9NUW8 608 aa12.88□□□□□ -0.35
IMP4-205ENST00000452955 SIX4Q9UIU6 781 aa12.88□□□□□ -0.35
IMP4-205ENST00000452955 TSC2P49815 1807 aa12.88□□□□□ -0.35
IMP4-205ENST00000452955 KIAA0391O15091 583 aaKnown RBP12.87□□□□□ -0.35
IMP4-205ENST00000452955 HRO43593 1189 aa12.87□□□□□ -0.35
IMP4-205ENST00000452955 LILRB5O75023 590 aa12.87□□□□□ -0.35
IMP4-205ENST00000452955 CST3P01034 146 aaPredicted RBP12.87□□□□□ -0.35
IMP4-205ENST00000452955 CKMP06732 381 aa12.87□□□□□ -0.35
IMP4-205ENST00000452955 ARSAP15289 507 aa12.87□□□□□ -0.35
IMP4-205ENST00000452955 BDNFP23560 247 aa12.87□□□□□ -0.35
IMP4-205ENST00000452955 DDX6P26196 483 aaKnown RBP eCLIP12.87□□□□□ -0.35
IMP4-205ENST00000452955 HOXC13P31276 330 aa12.87□□□□□ -0.35
IMP4-205ENST00000452955 GNL1P36915 607 aaPredicted RBP12.87□□□□□ -0.35
IMP4-205ENST00000452955 IFNAR2P48551 515 aa12.87□□□□□ -0.35
IMP4-205ENST00000452955 MLLT6P55198 1093 aaPredicted RBP12.87□□□□□ -0.35
IMP4-205ENST00000452955 GRSF1Q12849 480 aaKnown RBP eCLIP12.87□□□□□ -0.35
IMP4-205ENST00000452955 PUM1Q14671 1186 aaKnown RBP eCLIP12.87□□□□□ -0.35
IMP4-205ENST00000452955 FAM26FQ5R3K3 315 aa12.87□□□□□ -0.35
IMP4-205ENST00000452955 C4orf50Q6ZRC1 276 aa12.87□□□□□ -0.35
IMP4-205ENST00000452955 ERMP1Q7Z2K6 904 aa12.87□□□□□ -0.35
IMP4-205ENST00000452955 TRAPPC11Q7Z392 1133 aa12.87□□□□□ -0.35
IMP4-205ENST00000452955 TMEM150AQ86TG1 271 aa12.87□□□□□ -0.35
IMP4-205ENST00000452955 TOP6BLQ8N6T0 577 aa12.87□□□□□ -0.35
IMP4-205ENST00000452955 ARL14EPQ8N8R7 260 aaPredicted RBP12.87□□□□□ -0.35
IMP4-205ENST00000452955 ZNF507Q8TCN5 953 aa12.87□□□□□ -0.35
IMP4-205ENST00000452955 KIAA1586Q9HCI6 787 aa12.87□□□□□ -0.35
IMP4-205ENST00000452955 KBTBD4Q9NVX7 518 aa12.87□□□□□ -0.35
IMP4-205ENST00000452955 DUS2Q9NX74 493 aaKnown RBP12.87□□□□□ -0.35
IMP4-205ENST00000452955 GDAP2Q9NXN4 497 aa12.87□□□□□ -0.35
IMP4-205ENST00000452955 UXTQ9UBK9 157 aaPredicted RBP12.87□□□□□ -0.35
IMP4-205ENST00000452955 NXF1Q9UBU9 619 aaKnown RBP12.87□□□□□ -0.35
IMP4-205ENST00000452955 SLC8A2Q9UPR5 921 aa12.87□□□□□ -0.35
IMP4-205ENST00000452955 RALGAPA1Q6GYQ0 2036 aa12.87□□□□□ -0.35
IMP4-205ENST00000452955 NUP210Q8TEM1 1887 aaPredicted RBP12.87□□□□□ -0.35
IMP4-205ENST00000452955 PTPRJQ12913 1337 aa12.87□□□□□ -0.35
IMP4-205ENST00000452955 TRAV19A0A0A6YYK7 116 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 EXOC3O60645 756 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 USP17L7P0C7H9 530 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 ZSCAN22P10073 491 aaPredicted RBP12.86□□□□□ -0.35
IMP4-205ENST00000452955 HDCP19113 662 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 KCNA4P22459 653 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 HOXD13P35453 343 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 GALK1P51570 392 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 TNNC1P63316 161 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 AMPD2Q01433 879 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 MDH1BQ5I0G3 518 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.86□□□□□ -0.35
IMP4-205ENST00000452955 GRAMD1CQ8IYS0 662 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 CEP57L1Q8IYX8 460 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 GPR161Q8N6U8 529 aaKnown RBP12.86□□□□□ -0.35
IMP4-205ENST00000452955 FSIP1Q8NA03 581 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 XXYLT1Q8NBI6 393 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 MYLPFQ96A32 169 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 C7orf25Q9BPX7 421 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 MRPL45Q9BRJ2 306 aaKnown RBP12.86□□□□□ -0.35
IMP4-205ENST00000452955 IER2Q9BTL4 223 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 EPC1Q9H2F5 836 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 CUEDC2Q9H467 287 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 C2orf42Q9NWW7 574 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 ZMYM5Q9UJ78 669 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 CDH9Q9ULB4 789 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 PCDHA7Q9UN72 937 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 USP34Q70CQ2 3546 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 DENND4CQ5VZ89 1909 aa12.86□□□□□ -0.35
IMP4-205ENST00000452955 AXIN1O15169 862 aa12.85□□□□□ -0.35
IMP4-205ENST00000452955 YEATS4O95619 227 aa12.85□□□□□ -0.35
IMP4-205ENST00000452955 F13A1P00488 732 aa12.85□□□□□ -0.35
IMP4-205ENST00000452955 WEE1P30291 646 aa12.85□□□□□ -0.35
IMP4-205ENST00000452955 BIRC3Q13489 604 aa12.85□□□□□ -0.35
IMP4-205ENST00000452955 CUL4BQ13620 913 aa12.85□□□□□ -0.35
IMP4-205ENST00000452955 KCNB1Q14721 858 aa12.85□□□□□ -0.35
IMP4-205ENST00000452955 E2F4Q16254 413 aa12.85□□□□□ -0.35
IMP4-205ENST00000452955 SNRNP35Q16560 246 aaKnown RBP12.85□□□□□ -0.35
IMP4-205ENST00000452955 WDR72Q3MJ13 1102 aa12.85□□□□□ -0.35
IMP4-205ENST00000452955 UNC13DQ70J99 1090 aa12.85□□□□□ -0.35
IMP4-205ENST00000452955 DPH6Q7L8W6 267 aa12.85□□□□□ -0.35
IMP4-205ENST00000452955 LONP2Q86WA8 852 aa12.85□□□□□ -0.35
IMP4-205ENST00000452955 WDR49Q8IV35 697 aa12.85□□□□□ -0.35
IMP4-205ENST00000452955 NELL1Q92832 810 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms