RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 ORC1Q13415 861 aa12.3□□□□□ -0.44
SCN9A-204ENST00000452182 CAMK2BQ13554 666 aa12.3□□□□□ -0.44
SCN9A-204ENST00000452182 ADGRE1Q14246 886 aa12.3□□□□□ -0.44
SCN9A-204ENST00000452182 STILQ15468 1287 aa12.3□□□□□ -0.44
SCN9A-204ENST00000452182 MEA1Q16626 185 aa12.3□□□□□ -0.44
SCN9A-204ENST00000452182 DUSP6Q16828 381 aa12.3□□□□□ -0.44
SCN9A-204ENST00000452182 SGO2Q562F6 1265 aa12.3□□□□□ -0.44
SCN9A-204ENST00000452182 MDH1BQ5I0G3 518 aa12.3□□□□□ -0.44
SCN9A-204ENST00000452182 RNF19BQ6ZMZ0 732 aa12.3□□□□□ -0.44
SCN9A-204ENST00000452182 RTL10Q7L3V2 364 aa12.3□□□□□ -0.44
SCN9A-204ENST00000452182 ADGRD2Q7Z7M1 963 aa12.3□□□□□ -0.44
SCN9A-204ENST00000452182 HDAC7Q8WUI4 952 aa12.3□□□□□ -0.44
SCN9A-204ENST00000452182 MYLPFQ96A32 169 aa12.3□□□□□ -0.44
SCN9A-204ENST00000452182 CYFIP2Q96F07 1278 aa12.3□□□□□ -0.44
SCN9A-204ENST00000452182 GAS2L1Q99501 681 aaPredicted RBP12.3□□□□□ -0.44
SCN9A-204ENST00000452182 HNRNPABQ99729 332 aaKnown RBP12.3□□□□□ -0.44
SCN9A-204ENST00000452182 TLE6Q9H808 572 aa12.3□□□□□ -0.44
SCN9A-204ENST00000452182 TMLHEQ9NVH6 421 aa12.3□□□□□ -0.44
SCN9A-204ENST00000452182 IMPACTQ9P2X3 320 aa12.3□□□□□ -0.44
SCN9A-204ENST00000452182 PCDHB5Q9Y5E4 795 aa12.3□□□□□ -0.44
SCN9A-204ENST00000452182 MTMR11A4FU01 709 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 GFPT2O94808 682 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 CSPG5O95196 566 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 GLUD1P00367 558 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 CYP11B1P15538 503 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 FERP16591 822 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 GNA15P30679 374 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 HNRNPH3P31942 346 aaKnown RBP12.29□□□□□ -0.44
SCN9A-204ENST00000452182 KRT9P35527 623 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 MAGEA11P43364 429 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 ARPP19P56211 112 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 KCNC3Q14003 757 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 CNGA2Q16280 664 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 IER5LQ5T953 404 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 ASTLQ6HA08 431 aaPredicted RBP12.29□□□□□ -0.44
SCN9A-204ENST00000452182 PAQR9Q6ZVX9 377 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 ZNF677Q86XU0 584 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 SPATA2LQ8IUW3 424 aaPredicted RBP12.29□□□□□ -0.44
SCN9A-204ENST00000452182 CNGA4Q8IV77 575 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 GLYCTKQ8IVS8 523 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 TCEAL8Q8IYN2 117 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 FUKQ8N0W3 1084 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 C12orf29Q8N999 325 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 SLC22A17Q8WUG5 538 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 CPLX3Q8WVH0 158 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 DNAJC7Q99615 494 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 B3GNT5Q9BYG0 378 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 PLEKHA4Q9H4M7 779 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 DPP7Q9UHL4 492 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 FBXW11Q9UKB1 542 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 ATP8B3O60423 1300 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 O00370 1275 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 MED7O43513 233 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 MFAP3LO75121 409 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 VNN2O95498 520 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 CD19P15391 556 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 PRKCIP41743 596 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 CYP27A1Q02318 531 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 CCDC142Q17RM4 750 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 PPP1R26Q5T8A7 1209 aaPredicted RBP12.29□□□□□ -0.44
SCN9A-204ENST00000452182 SFMBT2Q5VUG0 894 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 LCLAT1Q6UWP7 414 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 VSTM1Q6UX27 236 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 IRF2BP2Q7Z5L9 587 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 SLC47A2Q86VL8 602 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 PALB2Q86YC2 1186 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 DEFB123Q8N688 67 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 SLC2A14Q8TDB8 520 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 EPS8L1Q8TE68 723 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 ZNF606Q8WXB4 792 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 TFAP2BQ92481 460 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 CEP295NLQ96MC4 621 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 FAM161BQ96MY7 647 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 LPIN3Q9BQK8 851 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 ZSWIM1Q9BR11 485 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 FAM49BQ9NUQ9 324 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.29□□□□□ -0.44
SCN9A-204ENST00000452182 HCFC2Q9Y5Z7 792 aa12.29□□□□□ -0.44
SCN9A-204ENST00000452182 AKR1B15C9JRZ8 316 aaPredicted RBP12.28□□□□□ -0.44
SCN9A-204ENST00000452182 PER2O15055 1255 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 ATMINO43313 823 aaPredicted RBP12.28□□□□□ -0.44
SCN9A-204ENST00000452182 NCK2O43639 380 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 ELF1P32519 619 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 NRIP1P48552 1158 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 TUFMP49411 452 aaKnown RBP12.28□□□□□ -0.44
SCN9A-204ENST00000452182 PDE6CP51160 858 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 ADCY1Q08828 1119 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 TCEAL5Q5H9L2 206 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 ELMSAN1Q6PJG2 1045 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 TMEM184AQ6ZMB5 413 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 Q7L0L9 218 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 RBM23Q86U06 439 aaKnown RBP12.28□□□□□ -0.44
SCN9A-204ENST00000452182 FAM35AQ86V20 835 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 DRC7Q8IY82 874 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 PDCD7Q8N8D1 485 aaKnown RBP12.28□□□□□ -0.44
SCN9A-204ENST00000452182 ANKRD52Q8NB46 1076 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 ATAD1Q8NBU5 361 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 KREMEN2Q8NCW0 462 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 OR8K1Q8NGG5 319 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 DDX1Q92499 740 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms