RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 KIF20AO95235 890 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 FGF19O95750 216 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 MYL1P05976 194 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 TRIM49P0CI25 452 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 TRIM49CP0CI26 452 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 CSH1P0DML2 217 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 CSH2P0DML3 217 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 BDNFP23560 247 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 NR2F2P24468 414 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 TARSP26639 723 aaKnown RBP10.35□□□□□ -0.75
USP54-207ENST00000451492 PIK3CAP42336 1068 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 SOX9P48436 509 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 CDH8P55286 799 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 STARD6P59095 220 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 RPL10AP62906 217 aaKnown RBP10.35□□□□□ -0.75
USP54-207ENST00000451492 NUCB2P80303 420 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 PRKCQQ04759 706 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 ORC1Q13415 861 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 TXNDC8Q6A555 127 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 C4orf50Q6ZRC1 276 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 FRMD5Q7Z6J6 570 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 MFSD6LQ8IWD5 586 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 CSGALNACT1Q8TDX6 532 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 PARD3BQ8TEW8 1205 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 DEPDC1BQ8WUY9 529 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 IRF7Q92985 503 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 SYAP1Q96A49 352 aaPredicted RBP10.35□□□□□ -0.75
USP54-207ENST00000451492 EEF2KMTQ96G04 330 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 PKMYT1Q99640 499 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 GPR88Q9GZN0 384 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 IL21Q9HBE4 155 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 LTB4R2Q9NPC1 389 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 MAGEC2Q9UBF1 373 aaPredicted RBP10.35□□□□□ -0.75
USP54-207ENST00000451492 CDH9Q9ULB4 789 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 FRMD4BQ9Y2L6 1034 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 NME7Q9Y5B8 376 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 PIAS3Q9Y6X2 628 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 CLDN5O00501 218 aa10.34□□□□□ -0.75
USP54-207ENST00000451492 TADA3O75528 432 aa10.34□□□□□ -0.75
USP54-207ENST00000451492 VNN1O95497 513 aa10.34□□□□□ -0.75
USP54-207ENST00000451492 HMGA1P17096 107 aaKnown RBP10.34□□□□□ -0.75
USP54-207ENST00000451492 WARSP23381 471 aaKnown RBP10.34□□□□□ -0.75
USP54-207ENST00000451492 ANXA13P27216 316 aa10.34□□□□□ -0.75
USP54-207ENST00000451492 GNL1P36915 607 aaPredicted RBP10.34□□□□□ -0.75
USP54-207ENST00000451492 AVPR1AP37288 418 aa10.34□□□□□ -0.75
USP54-207ENST00000451492 GRIK1P39086 918 aa10.34□□□□□ -0.75
USP54-207ENST00000451492 KPNA1P52294 538 aaPredicted RBP10.34□□□□□ -0.75
USP54-207ENST00000451492 NLRP12P59046 1061 aa10.34□□□□□ -0.75
USP54-207ENST00000451492 NCOA4Q13772 614 aa10.34□□□□□ -0.75
USP54-207ENST00000451492 ZNF667Q5HYK9 610 aa10.34□□□□□ -0.75
USP54-207ENST00000451492 ISM2Q6H9L7 571 aa10.34□□□□□ -0.75
USP54-207ENST00000451492 SPOPLQ6IQ16 392 aa10.34□□□□□ -0.75
USP54-207ENST00000451492 ZNF852Q6ZMS4 543 aa10.34□□□□□ -0.75
USP54-207ENST00000451492 DPH6Q7L8W6 267 aa10.34□□□□□ -0.75
USP54-207ENST00000451492 DNASE1L2Q92874 299 aa10.34□□□□□ -0.75
USP54-207ENST00000451492 CCDC34Q96HJ3 373 aa10.34□□□□□ -0.75
USP54-207ENST00000451492 PCED1BQ96HM7 432 aa10.34□□□□□ -0.75
USP54-207ENST00000451492 MED10Q9BTT4 135 aa10.34□□□□□ -0.75
USP54-207ENST00000451492 BCO2Q9BYV7 579 aa10.34□□□□□ -0.75
USP54-207ENST00000451492 TASP1Q9H6P5 420 aa10.34□□□□□ -0.75
USP54-207ENST00000451492 DMAC2Q9NW81 257 aa10.34□□□□□ -0.75
USP54-207ENST00000451492 SPATA6Q9NWH7 488 aaPredicted RBP10.34□□□□□ -0.75
USP54-207ENST00000451492 CCL26Q9Y258 94 aa10.34□□□□□ -0.75
USP54-207ENST00000451492 FANCMQ8IYD8 2048 aa10.34□□□□□ -0.75
USP54-207ENST00000451492 KIAA1549LQ6ZVL6 1849 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 GFRA3O60609 400 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 AKAP3O75969 853 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 F11P03951 625 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 KRT13P13646 458 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 CCNE1P24864 410 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 VAMP7P51809 220 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 NUBP1P53384 320 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 CACNA2D1P54289 1103 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 TNK2Q07912 1038 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 CFAP221Q4G0U5 840 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 TRIM68Q6AZZ1 485 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 FAM171BQ6P995 826 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 TMEM150AQ86TG1 271 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 SLC9A9Q8IVB4 645 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 FAM186BQ8IYM0 893 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 CMTM8Q8IZV2 173 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 FMR1NBQ8N0W7 255 aaPredicted RBP10.33□□□□□ -0.76
USP54-207ENST00000451492 SPATA18Q8TC71 538 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 BPIFB1Q8TDL5 484 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 FAM3CQ92520 227 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 MRPS31Q92665 395 aaKnown RBP10.33□□□□□ -0.76
USP54-207ENST00000451492 LRRC3BQ96PB8 259 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 SLC46A2Q9BY10 475 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 ZNF518BQ9C0D4 1074 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 SDCBP2Q9H190 292 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 XYLT2Q9H1B5 865 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 IRF2BPLQ9H1B7 796 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 TRPV4Q9HBA0 871 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 ABCB6Q9NP58 842 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 GTSE1Q9NYZ3 720 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 DLGAP2Q9P1A6 1054 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 R4GN57 208 aa10.33□□□□□ -0.76
USP54-207ENST00000451492 C2orf78A6NCI8 922 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 F8VP50 259 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 CHADO15335 359 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms