RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 NUDT12Q9BQG2 462 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 ISCA1Q9BUE6 129 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 RAB34Q9BZG1 259 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 GREM2Q9H772 168 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 DTNAQ9Y4J8 743 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 PCDHA2Q9Y5H9 948 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 COL5A2P05997 1499 aaPredicted RBP9.03□□□□□ -0.96
LSM5-208ENST00000450169 A0A088AWK7 358 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 ARHGAP42A6NI28 874 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 KLRF2D3W0D1 207 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 ITM2AO43736 263 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 CYP7A1P22680 504 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 PHBP35232 272 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 PPARGP37231 505 aaPredicted RBP9.02□□□□□ -0.96
LSM5-208ENST00000450169 EIF2B2P49770 351 aaKnown RBP9.02□□□□□ -0.96
LSM5-208ENST00000450169 CDK9P50750 372 aaKnown RBP9.02□□□□□ -0.96
LSM5-208ENST00000450169 MYBPC1Q00872 1141 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 DRAP1Q14919 205 aaPredicted RBP9.02□□□□□ -0.96
LSM5-208ENST00000450169 USP41Q3LFD5 358 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 ANKDD1AQ495B1 522 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 HERC4Q5GLZ8 1057 aaPredicted RBP9.02□□□□□ -0.96
LSM5-208ENST00000450169 FAM47AQ5JRC9 791 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 TMEM214Q6NUQ4 689 aaKnown RBP9.02□□□□□ -0.96
LSM5-208ENST00000450169 ELMSAN1Q6PJG2 1045 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 ADGRA1Q86SQ6 560 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 MARCH10Q8NA82 808 aaPredicted RBP9.02□□□□□ -0.96
LSM5-208ENST00000450169 BBOF1Q8ND07 529 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 MORC4Q8TE76 937 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 STARD8Q92502 1023 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 SLC39A7Q92504 469 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 JADE3Q92613 823 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 C1orf21Q9H246 121 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 LIN28AQ9H9Z2 209 aaKnown RBP9.02□□□□□ -0.96
LSM5-208ENST00000450169 ALG13Q9NP73 1137 aaKnown RBP9.02□□□□□ -0.96
LSM5-208ENST00000450169 PRDM11Q9NQV5 511 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 CHST7Q9NS84 486 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 LRP2BPQ9P2M1 347 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 PCDHGB4Q9UN71 923 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 PCDHGB5Q9Y5G0 923 aa9.02□□□□□ -0.96
LSM5-208ENST00000450169 GLI3P10071 1580 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 MAGEB6P1A0A0J9YX57 407 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 FSCN2O14926 492 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 TM9SF1O15321 606 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 DNAJA2O60884 412 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 SRGAP2CP0DJJ0 459 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 SRGAP2BP0DMP2 458 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 RBP3P10745 1247 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 CYP2C9P11712 490 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 RAG1P15918 1043 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 ZNF12P17014 697 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 STIP1P31948 543 aaKnown RBP9.02□□□□□ -0.97
LSM5-208ENST00000450169 SERPINB6P35237 376 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 NUP107P57740 925 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 CYP4A11Q02928 519 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 MECOMQ03112 1051 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 ORC2Q13416 577 aaPredicted RBP9.02□□□□□ -0.97
LSM5-208ENST00000450169 MYBPC2Q14324 1141 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 IZUMO3Q5VZ72 239 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 SNRNP48Q6IEG0 339 aaKnown RBP9.02□□□□□ -0.97
LSM5-208ENST00000450169 DCDC5Q6ZRR9 648 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 TCP10LQ8TDR4 215 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 TBCKQ8TEA7 893 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 SREK1Q8WXA9 508 aaKnown RBP9.02□□□□□ -0.97
LSM5-208ENST00000450169 SLC35C1Q96A29 364 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 CLIP3Q96DZ5 547 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 DCUN1D1Q96GG9 259 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 CNBD2Q96M20 576 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 MTMR9Q96QG7 549 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 GBA3Q9H227 469 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 TRNAU1APQ9NX07 287 aaKnown RBP9.02□□□□□ -0.97
LSM5-208ENST00000450169 PSMC3IPQ9P2W1 217 aaPredicted RBP9.02□□□□□ -0.97
LSM5-208ENST00000450169 PPARGC1AQ9UBK2 798 aaKnown RBP9.02□□□□□ -0.97
LSM5-208ENST00000450169 POLIQ9UNA4 740 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 INPP5FQ9Y2H2 1132 aa9.02□□□□□ -0.97
LSM5-208ENST00000450169 SHANK3Q9BYB0 1731 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 MYOCOSA0A1B0GUC4 107 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 FAM237BA0A1B0GVD1 139 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 GTPBP10A4D1E9 387 aaKnown RBP9.01□□□□□ -0.97
LSM5-208ENST00000450169 POTECB2RU33 542 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 GABBR2O75899 941 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 AKAP3O75969 853 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 ADAMTS2O95450 1211 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 FUCA1P04066 466 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 CCNIQ14094 377 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 SEPT6Q14141 434 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 PRKD1Q15139 912 aaPredicted RBP9.01□□□□□ -0.97
LSM5-208ENST00000450169 TCEAL1Q15170 157 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 CNGA3Q16281 694 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 OGFRL1Q5TC84 451 aaPredicted RBP9.01□□□□□ -0.97
LSM5-208ENST00000450169 METTL21CQ5VZV1 264 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 GPR153Q6NV75 609 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 C16orf87Q6PH81 154 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 IYDQ6PHW0 289 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 LPCAT2Q7L5N7 544 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 NOP9Q86U38 636 aaKnown RBP9.01□□□□□ -0.97
LSM5-208ENST00000450169 PRPF39Q86UA1 669 aaKnown RBP9.01□□□□□ -0.97
LSM5-208ENST00000450169 PPM1KQ8N3J5 372 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 ZCCHC9Q8N567 271 aaKnown RBP9.01□□□□□ -0.97
LSM5-208ENST00000450169 LZTR1Q8N653 840 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 SAMD3Q8N6K7 520 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms