RNA–Protein interactions for RNA: ENST00000449421.6

NUP85-202, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-202ENST00000449421 RBM41Q96IZ5 413 aaKnown RBP13.28□□□□□ -0.28
NUP85-202ENST00000449421 BTBD6Q96KE9 485 aa13.28□□□□□ -0.28
NUP85-202ENST00000449421 TNIP3Q96KP6 325 aa13.28□□□□□ -0.28
NUP85-202ENST00000449421 TRAIPQ9BWF2 469 aa13.28□□□□□ -0.28
NUP85-202ENST00000449421 FAM129AQ9BZQ8 928 aa13.28□□□□□ -0.28
NUP85-202ENST00000449421 SNX25Q9H3E2 840 aa13.28□□□□□ -0.28
NUP85-202ENST00000449421 FAM105AQ9NUU6 356 aa13.28□□□□□ -0.28
NUP85-202ENST00000449421 TCRBV5S1A1TA0A578 114 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 M0QYV0 167 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 O00370 1275 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 HUS1O60921 280 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 ZNF623O75123 536 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 GLI1P08151 1106 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 CHRM1P11229 460 aaPredicted RBP13.27□□□□□ -0.29
NUP85-202ENST00000449421 GNL1P36915 607 aaPredicted RBP13.27□□□□□ -0.29
NUP85-202ENST00000449421 THPOP40225 353 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 GPD2P43304 727 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 SSR1P43307 286 aaKnown RBP13.27□□□□□ -0.29
NUP85-202ENST00000449421 FNTAP49354 379 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 GUCY2FP51841 1108 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 DR1Q01658 176 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 MGAT3Q09327 533 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 ZNF211Q13398 564 aaPredicted RBP13.27□□□□□ -0.29
NUP85-202ENST00000449421 CYP1B1Q16678 543 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 FAM26DQ5JW98 314 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 PPP1R15BQ5SWA1 713 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 ALS2CLQ60I27 953 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 ARHGAP17Q68EM7 881 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 SYDE1Q6ZW31 735 aaPredicted RBP13.27□□□□□ -0.29
NUP85-202ENST00000449421 MRPL10Q7Z7H8 261 aaKnown RBP13.27□□□□□ -0.29
NUP85-202ENST00000449421 ZDHHC17Q8IUH5 632 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 CRYBG2Q8N1P7 616 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 TOP6BLQ8N6T0 577 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 GOLGA6L1Q8N7Z2 621 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 SMG8Q8ND04 991 aaKnown RBP13.27□□□□□ -0.29
NUP85-202ENST00000449421 APPL2Q8NEU8 664 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 GRK7Q8WTQ7 553 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 HDAC7Q8WUI4 952 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 WNT8BQ93098 351 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 MAGOHBQ96A72 148 aaKnown RBP13.27□□□□□ -0.29
NUP85-202ENST00000449421 DDX47Q9H0S4 455 aaKnown RBP13.27□□□□□ -0.29
NUP85-202ENST00000449421 CYLDQ9NQC7 956 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 TUBGCP4Q9UGJ1 667 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 CHORDC1Q9UHD1 332 aaPredicted RBP13.27□□□□□ -0.29
NUP85-202ENST00000449421 PCYOX1Q9UHG3 505 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 HES2Q9Y543 173 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 RALGAPA2Q2PPJ7 1873 aa13.27□□□□□ -0.29
NUP85-202ENST00000449421 A8MXQ7 604 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 PQBP1O60828 265 aaKnown RBP13.26□□□□□ -0.29
NUP85-202ENST00000449421 ZMYND10O75800 440 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 RNF8O76064 485 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 CHRNA1P02708 482 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 THP07101 528 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 KRT7P08729 469 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 SSTR3P32745 418 aaPredicted RBP13.26□□□□□ -0.29
NUP85-202ENST00000449421 RPL9P32969 192 aaKnown RBP13.26□□□□□ -0.29
NUP85-202ENST00000449421 SLC8A3P57103 927 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 LMNB2Q03252 620 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 SMC1AQ14683 1233 aaKnown RBP13.26□□□□□ -0.29
NUP85-202ENST00000449421 DNAH12Q6ZR08 3092 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 POLNQ7Z5Q5 900 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 PHLDB2Q86SQ0 1253 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 C12orf50Q8NA57 414 aaPredicted RBP13.26□□□□□ -0.29
NUP85-202ENST00000449421 IFT81Q8WYA0 676 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 C18orf25Q96B23 403 aaPredicted RBP13.26□□□□□ -0.29
NUP85-202ENST00000449421 LRRC45Q96CN5 670 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 MCEEQ96PE7 176 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 TWNKQ96RR1 684 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 LRRC19Q9H756 370 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 MED4Q9NPJ6 270 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 ASNSD1Q9NWL6 643 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 KLK14Q9P0G3 267 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 AMACRQ9UHK6 382 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 TBX21Q9UL17 535 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 USTQ9Y2C2 406 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 ATP11BQ9Y2G3 1177 aa13.26□□□□□ -0.29
NUP85-202ENST00000449421 FAM170AA1A519 330 aa13.25□□□□□ -0.29
NUP85-202ENST00000449421 ARHGEF37A1IGU5 675 aa13.25□□□□□ -0.29
NUP85-202ENST00000449421 KIAA0355O15063 1070 aa13.25□□□□□ -0.29
NUP85-202ENST00000449421 CLTBP09497 229 aa13.25□□□□□ -0.29
NUP85-202ENST00000449421 WARSP23381 471 aaKnown RBP13.25□□□□□ -0.29
NUP85-202ENST00000449421 ACADSBP45954 432 aa13.25□□□□□ -0.29
NUP85-202ENST00000449421 FAM193AP78312 1265 aa13.25□□□□□ -0.29
NUP85-202ENST00000449421 PDCLQ13371 301 aa13.25□□□□□ -0.29
NUP85-202ENST00000449421 HLTFQ14527 1009 aaKnown RBP eCLIP13.25□□□□□ -0.29
NUP85-202ENST00000449421 PTPN20Q4JDL3 420 aa13.25□□□□□ -0.29
NUP85-202ENST00000449421 GLRA4Q5JXX5 417 aa13.25□□□□□ -0.29
NUP85-202ENST00000449421 ZFYVE27Q5T4F4 411 aa13.25□□□□□ -0.29
NUP85-202ENST00000449421 TRAF7Q6Q0C0 670 aa13.25□□□□□ -0.29
NUP85-202ENST00000449421 SND1Q7KZF4 910 aaKnown RBP eCLIP13.25□□□□□ -0.29
NUP85-202ENST00000449421 CCDC50Q8IVM0 306 aa13.25□□□□□ -0.29
NUP85-202ENST00000449421 TMEM86AQ8N2M4 240 aa13.25□□□□□ -0.29
NUP85-202ENST00000449421 SPATA18Q8TC71 538 aa13.25□□□□□ -0.29
NUP85-202ENST00000449421 MCRS1Q96EZ8 462 aa13.25□□□□□ -0.29
NUP85-202ENST00000449421 DDX27Q96GQ7 796 aaKnown RBP13.25□□□□□ -0.29
NUP85-202ENST00000449421 ERP44Q9BS26 406 aa13.25□□□□□ -0.29
NUP85-202ENST00000449421 HTATIP2Q9BUP3 242 aa13.25□□□□□ -0.29
NUP85-202ENST00000449421 ERVK-5Q9HDB9 667 aa13.25□□□□□ -0.29
NUP85-202ENST00000449421 TSPAN16Q9UKR8 245 aa13.25□□□□□ -0.29
NUP85-202ENST00000449421 EFR3BQ9Y2G0 817 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms