RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 UPF3AQ9H1J1 476 aaKnown RBP7.47□□□□□ -1.21
BEST1-202ENST00000449131 GPATCH2LQ9NWQ4 482 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 FAM53CQ9NYF3 392 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 ASTN1O14525 1302 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 CES2O00748 559 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 CTSHP09668 335 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 SPATA31C1P0DKV0 1188 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 CHRM1P11229 460 aaPredicted RBP7.47□□□□□ -1.21
BEST1-202ENST00000449131 CYP2C9P11712 490 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 DEUP1Q05D60 604 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 PPATQ06203 517 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 CUL3Q13618 768 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 AMHR2Q16671 573 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 ZNF662Q6ZS27 426 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 FBXO36Q8NEA4 188 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 TTC8Q8TAM2 541 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.47□□□□□ -1.21
BEST1-202ENST00000449131 FAM111AQ96PZ2 611 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 KCTD10Q9H3F6 313 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 MANSC1Q9H8J5 431 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 PLEKHA5Q9HAU0 1116 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 LRRC4BQ9NT99 713 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 ADA2Q9NZK5 511 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 TRIM33Q9UPN9 1127 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 CYP3A7-CYP3A51PA0A087WV96 503 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 GNGT2O14610 69 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 NPTXRO95502 500 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 CYP3A7P24462 503 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 STIP1P31948 543 aaKnown RBP7.47□□□□□ -1.21
BEST1-202ENST00000449131 RAP1GAPP47736 663 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 PRAMEP78395 509 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 YWHAHQ04917 246 aaPredicted RBP7.47□□□□□ -1.21
BEST1-202ENST00000449131 R3HDM1Q15032 1099 aaKnown RBP7.47□□□□□ -1.21
BEST1-202ENST00000449131 SPOCD1Q6ZMY3 1216 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 ST13P4Q8IZP2 240 aaPredicted RBP7.47□□□□□ -1.21
BEST1-202ENST00000449131 ARMC2Q8NEN0 867 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 KAT2BQ92831 832 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 SHISA4Q96DD7 197 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 TSC22D3Q99576 134 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 SPON2Q9BUD6 331 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 KIAA1683Q9H0B3 1180 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 ABCF3Q9NUQ8 709 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 PHTF1Q9UMS5 762 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 B2RBV5 119 aa7.46□□□□□ -1.21
BEST1-202ENST00000449131 SMAPO00193 183 aa7.46□□□□□ -1.21
BEST1-202ENST00000449131 RIPK2O43353 540 aa7.46□□□□□ -1.21
BEST1-202ENST00000449131 TLR2O60603 784 aa7.46□□□□□ -1.21
BEST1-202ENST00000449131 SPAG6O75602 509 aa7.46□□□□□ -1.21
BEST1-202ENST00000449131 PAX7P23759 505 aa7.46□□□□□ -1.21
BEST1-202ENST00000449131 RFC1P35251 1148 aaPredicted RBP7.46□□□□□ -1.21
BEST1-202ENST00000449131 PSEN1P49768 467 aa7.46□□□□□ -1.21
BEST1-202ENST00000449131 HSD17B4P51659 736 aa7.46□□□□□ -1.21
BEST1-202ENST00000449131 SH3BGRP55822 239 aaPredicted RBP7.46□□□□□ -1.21
BEST1-202ENST00000449131 PDE1CQ14123 709 aaPredicted RBP7.46□□□□□ -1.21
BEST1-202ENST00000449131 ARSHQ5FYA8 562 aa7.46□□□□□ -1.21
BEST1-202ENST00000449131 ACOT1Q86TX2 421 aa7.46□□□□□ -1.21
BEST1-202ENST00000449131 LRRC6Q86X45 466 aa7.46□□□□□ -1.21
BEST1-202ENST00000449131 ARID3BQ8IVW6 561 aaPredicted RBP7.46□□□□□ -1.21
BEST1-202ENST00000449131 LRRC43Q8N309 656 aa7.46□□□□□ -1.21
BEST1-202ENST00000449131 LNX1Q8TBB1 728 aaPredicted RBP7.46□□□□□ -1.21
BEST1-202ENST00000449131 PIK3R5Q8WYR1 880 aa7.46□□□□□ -1.21
BEST1-202ENST00000449131 TMEM237Q96Q45 408 aa7.46□□□□□ -1.21
BEST1-202ENST00000449131 GLIS2Q9BZE0 524 aaPredicted RBP7.46□□□□□ -1.21
BEST1-202ENST00000449131 SUDS3Q9H7L9 328 aaPredicted RBP7.46□□□□□ -1.21
BEST1-202ENST00000449131 C10orf88Q9H8K7 445 aa7.46□□□□□ -1.21
BEST1-202ENST00000449131 FAF1Q9UNN5 650 aaPredicted RBP7.46□□□□□ -1.21
BEST1-202ENST00000449131 NAALADL1Q9UQQ1 740 aa7.46□□□□□ -1.21
BEST1-202ENST00000449131 PCDHA3Q9Y5H8 950 aa7.46□□□□□ -1.21
BEST1-202ENST00000449131 C3orf70A6NLC5 250 aaPredicted RBP7.46□□□□□ -1.22
BEST1-202ENST00000449131 VWA5AO00534 786 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 NEMP1O14524 444 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 PPP1R11O60927 126 aaPredicted RBP7.46□□□□□ -1.22
BEST1-202ENST00000449131 CHEK2O96017 543 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 SERPINB9P50453 376 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 NSUN2Q08J23 767 aaKnown RBP eCLIP7.46□□□□□ -1.22
BEST1-202ENST00000449131 MORF4L2Q15014 288 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 NPY5RQ15761 445 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 MPZL3Q6UWV2 235 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 IRF2BP2Q7Z5L9 587 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 SAMD3Q8N6K7 520 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 C3orf20Q8ND61 904 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 ETNPPLQ8TBG4 499 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 EPS8L1Q8TE68 723 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 AFG1LQ8WV93 481 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 E2F7Q96AV8 911 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 IFT43Q96FT9 208 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 THTPAQ9BU02 230 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 DCLK3Q9C098 648 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 DNAJC18Q9H819 358 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 CHST7Q9NS84 486 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 DPP3Q9NY33 737 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.46□□□□□ -1.22
BEST1-202ENST00000449131 KLK14Q9P0G3 267 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 MYH10P35580 1976 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 EEF2KO00418 725 aaKnown RBP7.46□□□□□ -1.22
BEST1-202ENST00000449131 GAS2O43903 313 aaKnown RBP7.46□□□□□ -1.22
BEST1-202ENST00000449131 GNL1P36915 607 aaPredicted RBP7.46□□□□□ -1.22
BEST1-202ENST00000449131 ESRRGP62508 458 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 GCNT1Q02742 428 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 HIC1Q14526 733 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms