RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 MYLPFQ96A32 169 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 EIF3CQ99613 913 aaKnown RBP14.9□□□□□ -0.02
SHMT2-203ENST00000449049 SPTLC3Q9NUV7 552 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 TMLHEQ9NVH6 421 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 MTUS1Q9ULD2 1270 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 SSX2IPQ9Y2D8 614 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 A0A1W2PPC1 479 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 ZNF263O14978 683 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 UNGP13051 313 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-203ENST00000449049 SSTR3P32745 418 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-203ENST00000449049 CREMQ03060 361 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 PTPN14Q15678 1187 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 CLEC16AQ2KHT3 1053 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 PPP2R2DQ66LE6 453 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 DENND1BQ6P3S1 775 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 TTC30AQ86WT1 665 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 FBXO22Q8NEZ5 403 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 TRIM44Q96DX7 344 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-203ENST00000449049 CLSTN3Q9BQT9 956 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 PDCL3Q9H2J4 239 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 RXFP1Q9HBX9 757 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 ALG13Q9NP73 1137 aaKnown RBP14.9□□□□□ -0.02
SHMT2-203ENST00000449049 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.9□□□□□ -0.02
SHMT2-203ENST00000449049 MRPL17Q9NRX2 175 aaKnown RBP14.9□□□□□ -0.02
SHMT2-203ENST00000449049 SEPT11Q9NVA2 429 aaKnown RBP14.9□□□□□ -0.02
SHMT2-203ENST00000449049 NAGPAQ9UK23 515 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 CDY1Q9Y6F8 540 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 H3BNC9 293 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 M0QYV0 167 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 C2CD2LO14523 706 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 GZMAP12544 262 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 DNAJB1P25685 340 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 NOMO3P69849 1222 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 GPR17Q13304 367 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 NFE2Q16621 373 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-203ENST00000449049 SLC39A12Q504Y0 691 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 FAM35AQ86V20 835 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 PASD1Q8IV76 773 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 ANKRD52Q8NB46 1076 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 POF1BQ8WVV4 589 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 ZNF518BQ9C0D4 1074 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 FNIP2Q9P278 1114 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 HESX1Q9UBX0 185 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 IRAK3Q9Y616 596 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 PTPRDP23468 1912 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 ADAM12O43184 909 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 DNAJB2P25686 324 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 ADORA2BP29275 332 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 CYP27A1Q02318 531 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 CENPCQ03188 943 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 SMARCB1Q12824 385 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 ALKBH5Q6P6C2 394 aaKnown RBP14.89□□□□□ -0.03
SHMT2-203ENST00000449049 C4orf50Q6ZRC1 276 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 TOGARAM2Q6ZUX3 1019 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 WDTC1Q8N5D0 677 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 AUTS2Q8WXX7 1259 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 SLC28A3Q9HAS3 691 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 TLR9Q9NR96 1032 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 CEP83Q9Y592 693 aa14.89□□□□□ -0.03
SHMT2-203ENST00000449049 CLDN5O00501 218 aa14.88□□□□□ -0.03
SHMT2-203ENST00000449049 FSCN2O14926 492 aa14.88□□□□□ -0.03
SHMT2-203ENST00000449049 GRM6O15303 877 aa14.88□□□□□ -0.03
SHMT2-203ENST00000449049 CPB1P15086 417 aa14.88□□□□□ -0.03
SHMT2-203ENST00000449049 RPL17P18621 184 aaKnown RBP14.88□□□□□ -0.03
SHMT2-203ENST00000449049 GPD2P43304 727 aa14.88□□□□□ -0.03
SHMT2-203ENST00000449049 BCAT1P54687 386 aa14.88□□□□□ -0.03
SHMT2-203ENST00000449049 ERVFC1P60507 584 aa14.88□□□□□ -0.03
SHMT2-203ENST00000449049 ROR1Q01973 937 aa14.88□□□□□ -0.03
SHMT2-203ENST00000449049 CFAP221Q4G0U5 840 aa14.88□□□□□ -0.03
SHMT2-203ENST00000449049 TMEM35BQ8NCS4 154 aa14.88□□□□□ -0.03
SHMT2-203ENST00000449049 C2orf15Q8WU43 125 aaKnown RBP14.88□□□□□ -0.03
SHMT2-203ENST00000449049 FUBP3Q96I24 572 aaKnown RBP eCLIP14.88□□□□□ -0.03
SHMT2-203ENST00000449049 TCF25Q9BQ70 676 aa14.88□□□□□ -0.03
SHMT2-203ENST00000449049 MED10Q9BTT4 135 aa14.88□□□□□ -0.03
SHMT2-203ENST00000449049 TAS2R14Q9NYV8 317 aa14.88□□□□□ -0.03
SHMT2-203ENST00000449049 PYCARDQ9ULZ3 195 aa14.88□□□□□ -0.03
SHMT2-203ENST00000449049 REXO2Q9Y3B8 237 aaKnown RBP14.88□□□□□ -0.03
SHMT2-203ENST00000449049 ATP8B3O60423 1300 aa14.88□□□□□ -0.03
SHMT2-203ENST00000449049 FAM200BP0CF97 657 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 SETSIPP0DME0 302 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 OR1D2P34982 312 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 BST2Q10589 180 aaKnown RBP14.87□□□□□ -0.03
SHMT2-203ENST00000449049 GPM6BQ13491 265 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 CAMK1Q14012 370 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 SMC1AQ14683 1233 aaKnown RBP14.87□□□□□ -0.03
SHMT2-203ENST00000449049 SPA17Q15506 151 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 CCDC122Q5T0U0 273 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 C10orf76Q5T2E6 689 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 NAA35Q5VZE5 725 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 ACAD10Q6JQN1 1059 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 PPP1R2P3Q6NXS1 205 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 TMC7Q7Z402 723 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 SPATA2LQ8IUW3 424 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-203ENST00000449049 C1orf131Q8NDD1 294 aaKnown RBP14.87□□□□□ -0.03
SHMT2-203ENST00000449049 ACRBPQ8NEB7 543 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 UBA3Q8TBC4 463 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 SECISBP2LQ93073 1101 aaKnown RBP14.87□□□□□ -0.03
SHMT2-203ENST00000449049 TIFAQ96CG3 184 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 SMARCD1Q96GM5 515 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 DESI2Q9BSY9 194 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms