RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 CDKN2BP42772 138 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 RABGGTBP53611 331 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 EIF3BP55884 814 aaKnown RBP15.59■□□□□ 0.09
SF1-211ENST00000448404 PTPN11Q06124 597 aaPredicted RBP15.59■□□□□ 0.09
SF1-211ENST00000448404 HIC1Q14526 733 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 EFTUD2Q15029 972 aaKnown RBP eCLIP15.59■□□□□ 0.096e-8■■■■■ 29
SF1-211ENST00000448404 DPP9Q86TI2 863 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 SESTD1Q86VW0 696 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 PEBP4Q96S96 227 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 INTS9Q9NV88 658 aaKnown RBP15.59■□□□□ 0.09
SF1-211ENST00000448404 SNTG2Q9NY99 539 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 TUBGCP4Q9UGJ1 667 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 PARP2Q9UGN5 583 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 TNFSF13BQ9Y275 285 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 TRIP11Q15643 1979 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 TMEM120BA0PK00 339 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 F5H423 210 aaPredicted RBP15.59■□□□□ 0.09
SF1-211ENST00000448404 VIMP08670 466 aaKnown RBP15.59■□□□□ 0.09
SF1-211ENST00000448404 ITIH2P19823 946 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 MMP13P45452 471 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 ATXN1P54253 815 aaKnown RBP15.59■□□□□ 0.09
SF1-211ENST00000448404 OTUD4Q01804 1114 aaKnown RBP15.59■□□□□ 0.09
SF1-211ENST00000448404 SNAPC2Q13487 334 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 SLMAPQ14BN4 828 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 FAM102AQ5T9C2 384 aaPredicted RBP15.59■□□□□ 0.09
SF1-211ENST00000448404 ZC3H18Q86VM9 953 aaKnown RBP15.59■□□□□ 0.09
SF1-211ENST00000448404 XYLT1Q86Y38 959 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 SEC16BQ96JE7 1060 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 OSMRQ99650 979 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 C2orf40Q9H1Z8 148 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 C12orf65Q9H3J6 166 aaKnown RBP15.59■□□□□ 0.09
SF1-211ENST00000448404 GOLGA2P5Q9HBQ8 144 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 CAPN7Q9Y6W3 813 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 A0A0G2JMZ2 1700 aa15.59■□□□□ 0.09
SF1-211ENST00000448404 E5RJQ4 531 aa15.58■□□□□ 0.09
SF1-211ENST00000448404 CALB1P05937 261 aa15.58■□□□□ 0.09
SF1-211ENST00000448404 DRD4P21917 467 aa15.58■□□□□ 0.09
SF1-211ENST00000448404 CLUL1Q15846 466 aa15.58■□□□□ 0.09
SF1-211ENST00000448404 ERMARDQ5T6L9 678 aa15.58■□□□□ 0.09
SF1-211ENST00000448404 DPY19L2Q6NUT2 758 aa15.58■□□□□ 0.09
SF1-211ENST00000448404 FASTKD5Q7L8L6 764 aaKnown RBP15.58■□□□□ 0.09
SF1-211ENST00000448404 ACOT1Q86TX2 421 aa15.58■□□□□ 0.09
SF1-211ENST00000448404 CCDC125Q86Z20 511 aa15.58■□□□□ 0.09
SF1-211ENST00000448404 OTUD6BQ8N6M0 293 aa15.58■□□□□ 0.09
SF1-211ENST00000448404 C3orf20Q8ND61 904 aa15.58■□□□□ 0.09
SF1-211ENST00000448404 KIF12Q96FN5 646 aa15.58■□□□□ 0.09
SF1-211ENST00000448404 ELAC2Q9BQ52 826 aaKnown RBP15.58■□□□□ 0.09
SF1-211ENST00000448404 MRPL45Q9BRJ2 306 aaKnown RBP15.58■□□□□ 0.09
SF1-211ENST00000448404 TRAIPQ9BWF2 469 aa15.58■□□□□ 0.09
SF1-211ENST00000448404 CXorf56Q9H5V9 222 aa15.58■□□□□ 0.09
SF1-211ENST00000448404 LRRC37A2A6NM11 1700 aa15.58■□□□□ 0.09
SF1-211ENST00000448404 SCN1AP35498 2009 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 SIP14410 1827 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 LOC285556D6RIA3 1793 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 TSPAN1O60635 241 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 NPTXRO95502 500 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 PHKA2P46019 1235 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 SLC25A11Q02978 314 aaKnown RBP15.58■□□□□ 0.08
SF1-211ENST00000448404 TMED2Q15363 201 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 ZNF792Q3KQV3 632 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 MSS51Q4VC12 460 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 ZNF618Q5T7W0 954 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 MTHFD1LQ6UB35 978 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 PGM2Q96G03 612 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 VCPIP1Q96JH7 1222 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 CFAP57Q96MR6 1250 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 OSBPL7Q9BZF2 842 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 MIS12Q9H081 205 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 MROH8Q9H579 483 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 C3orf70A6NLC5 250 aaPredicted RBP15.58■□□□□ 0.08
SF1-211ENST00000448404 CPP00450 1065 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 MYCNP04198 464 aaPredicted RBP15.58■□□□□ 0.08
SF1-211ENST00000448404 MIPP30301 263 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 SCYL2Q6P3W7 929 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 VSTM1Q6UX27 236 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 ARMC9Q7Z3E5 817 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 NPLOC4Q8TAT6 608 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 CLEC4CQ8WTT0 213 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 NDRG1Q92597 394 aaKnown RBP15.58■□□□□ 0.08
SF1-211ENST00000448404 PTPN18Q99952 460 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 PAIP2Q9BPZ3 127 aaKnown RBP15.58■□□□□ 0.08
SF1-211ENST00000448404 DPEP3Q9H4B8 488 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 NAALADL1Q9UQQ1 740 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 CEP83Q9Y592 693 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 SNX9Q9Y5X1 595 aa15.58■□□□□ 0.08
SF1-211ENST00000448404 ASAP2O43150 1006 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 DYNC1LI2O43237 492 aaPredicted RBP15.57■□□□□ 0.08
SF1-211ENST00000448404 CILPO75339 1184 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 PDGFRBP09619 1106 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 ABCD1P33897 745 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 MAGEA4P43358 317 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 TMEM132DQ14C87 1099 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 GRIK4Q16099 956 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 C6orf118Q5T5N4 469 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 FAXCQ5TGI0 409 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 UNC45BQ8IWX7 931 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 SCUBE3Q8IX30 993 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 ZBED8Q8IZ13 594 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 C7orf31Q8N865 590 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 FAM71DQ8N9W8 422 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms