RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 NT5C1AQ9BXI3 368 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 EDEM3Q9BZQ6 932 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 GPR88Q9GZN0 384 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 ELOVL4Q9GZR5 314 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 DPEP3Q9H4B8 488 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 HMGXB4Q9UGU5 601 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 GTF3C4Q9UKN8 822 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 KIAA1257Q9ULG3 409 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 PCDHB4Q9Y5E5 795 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 MTCH2Q9Y6C9 303 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 CDY1Q9Y6F8 540 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 TRANK1O15050 2925 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 SZT2Q5T011 3432 aa8.04□□□□□ -1.12
AC004540.1-206ENST00000448056 ITIH6Q6UXX5 1313 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 KIAA1671Q9BY89 1806 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 A0A1W2PQJ5 194 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 MYBPHLA2RUH7 354 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 PER2O15055 1255 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 CLASP2O75122 1294 aaKnown RBP8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 ABLIM3O94929 683 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 ADCY5O95622 1261 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 C1RP00736 705 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 ADH1AP07327 375 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 PAEPP09466 180 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 OR4Q2P0C623 313 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 KRT5P13647 590 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 IGFBP4P22692 258 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 USP8P40818 1118 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 ZNF132P52740 706 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 JAM2P57087 298 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 PSMC1P62191 440 aaKnown RBP8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 TSPY1Q01534 308 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 SMARCB1Q12824 385 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 GPR17Q13304 367 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 ORC1Q13415 861 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 SLC39A12Q504Y0 691 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 ZNF394Q53GI3 561 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 INTS6LQ5JSJ4 861 aaKnown RBP8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 TPGS2Q68CL5 300 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 LILRA6Q6PI73 481 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 RNF19BQ6ZMZ0 732 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 CACNA2D4Q7Z3S7 1137 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 ADGRD2Q7Z7M1 963 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 RBM23Q86U06 439 aaKnown RBP8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 PALB2Q86YC2 1186 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 GLYCTKQ8IVS8 523 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 FAM71AQ8IYT1 594 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 DCP1BQ8IZD4 617 aaKnown RBP8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 C12orf29Q8N999 325 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 B3GALNT2Q8NCR0 500 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 ZNF461Q8TAF7 563 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 MYCBPAPQ8TBZ2 947 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 CPLX3Q8WVH0 158 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 BAP1Q92560 729 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 CDX2Q99626 313 aaPredicted RBP8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 SYT15Q9BQS2 421 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 TTYH3Q9C0H2 523 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 DNAI2Q9GZS0 605 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 NSUN3Q9H649 340 aaKnown RBP8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 TLE6Q9H808 572 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 GRPEL1Q9HAV7 217 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 NLRC4Q9NPP4 1024 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 CRTAC1Q9NQ79 661 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 TMLHEQ9NVH6 421 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 CEP72Q9P209 647 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 MAFFQ9ULX9 164 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 CAPN11Q9UMQ6 739 aa8.03□□□□□ -1.12
AC004540.1-206ENST00000448056 WDR27A2RRH5 827 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 F8VZ95 297 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 CYP26A1O43174 497 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 TGM5O43548 720 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 VNN2O95498 520 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 SPATA31D3P0C874 917 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 PNMA6AP0CW24 399 aaPredicted RBP8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 CPB1P15086 417 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 ATF2P15336 505 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 SOX5P35711 763 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 STAT1P42224 750 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 NRIP1P48552 1158 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 MRE11P49959 708 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 CLCN4P51793 760 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 CDR1P51861 262 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 BPIFB4P59827 614 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 ROR1Q01973 937 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 TBX2Q13207 712 aaPredicted RBP8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 MAPRE1Q15691 268 aaKnown RBP8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 NFE2Q16621 373 aaPredicted RBP8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 DUSP6Q16828 381 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 TCEAL5Q5H9L2 206 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 MDH1BQ5I0G3 518 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 SPATA31D4Q6ZUB0 917 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 PAQR9Q6ZVX9 377 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 PPFIBP1Q86W92 1011 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 ATAD1Q8NBU5 361 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 RBBP8NLQ8NC74 664 aaPredicted RBP8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 ZNF397Q8NF99 534 aaPredicted RBP8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 C2orf15Q8WU43 125 aaKnown RBP8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 SLC22A17Q8WUG5 538 aa8.02□□□□□ -1.13
AC004540.1-206ENST00000448056 TFAP2BQ92481 460 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms