RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 RUNDC3BQ96NL0 473 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 ALPK1Q96QP1 1244 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 TAAR1Q96RJ0 339 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 PSMB7Q99436 277 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 KRT12Q99456 494 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 AGPAT1Q99943 283 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 MOV10L1Q9BXT6 1211 aaKnown RBP4.35□□□□□ -1.71
PTPN12-208ENST00000447995 PACSIN1Q9BY11 444 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 GLIS2Q9BZE0 524 aaPredicted RBP4.35□□□□□ -1.71
PTPN12-208ENST00000447995 CEP44Q9C0F1 390 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 RAB17Q9H0T7 212 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 ISCUQ9H1K1 167 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 FAM204AQ9H8W3 233 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 KIAA1586Q9HCI6 787 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 RAVER2Q9HCJ3 691 aaKnown RBP4.35□□□□□ -1.71
PTPN12-208ENST00000447995 ZCCHC17Q9NP64 241 aaKnown RBP4.35□□□□□ -1.71
PTPN12-208ENST00000447995 UBE2TQ9NPD8 197 aaPredicted RBP4.35□□□□□ -1.71
PTPN12-208ENST00000447995 KMT5AQ9NQR1 393 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 GDF3Q9NR23 364 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 FAM114A2Q9NRY5 505 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 HOMER2Q9NSB8 354 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 RNF146Q9NTX7 359 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 SEPT11Q9NVA2 429 aaKnown RBP4.35□□□□□ -1.71
PTPN12-208ENST00000447995 GOLGA6AQ9NYA3 693 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 HSPBP1Q9NZL4 362 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 TMOD4Q9NZQ9 345 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 ZNF112Q9UJU3 913 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 TMEM59LQ9UK28 342 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 ZHX1Q9UKY1 873 aaPredicted RBP4.35□□□□□ -1.71
PTPN12-208ENST00000447995 PCDHA10Q9Y5I2 948 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 PPP2R3BQ9Y5P8 575 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 NFASCO94856 1347 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 EMSYQ7Z589 1322 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 COL4A5P29400 1685 aa4.35□□□□□ -1.71
PTPN12-208ENST00000447995 ANKRD33BA6NCL7 494 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 CCDC169A6NNP5 214 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 NPIPB6E9PJ23 425 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 KRIT1O00522 736 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 PRRG2O14669 202 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 ATP2A1O14983 1001 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 SLC16A4O15374 487 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 BUB1BO60566 1050 aaPredicted RBP4.34□□□□□ -1.71
PTPN12-208ENST00000447995 RTN2O75298 545 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 MTA2O94776 668 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 GARTP22102 1010 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 HSPA9P38646 679 aaKnown RBP4.34□□□□□ -1.71
PTPN12-208ENST00000447995 MAPK8P45983 427 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 GMPSP49915 693 aaPredicted RBP4.34□□□□□ -1.71
PTPN12-208ENST00000447995 DNA2P51530 1060 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 CDR1P51861 262 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 PEX3P56589 373 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 BACE1P56817 501 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 BPIFB4P59827 614 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 GPC5P78333 572 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 SLC7A5Q01650 507 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 PTPN11Q06124 597 aaPredicted RBP4.34□□□□□ -1.71
PTPN12-208ENST00000447995 STRN3Q13033 797 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 SPP2Q13103 211 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 BAATQ14032 418 aaPredicted RBP4.34□□□□□ -1.71
PTPN12-208ENST00000447995 DHX34Q14147 1143 aaKnown RBP4.34□□□□□ -1.71
PTPN12-208ENST00000447995 PLS1Q14651 629 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 COG2Q14746 738 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 LRRC14Q15048 493 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 ZSCAN26Q16670 478 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 ARHGAP44Q17R89 818 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 SUPT20HL1Q3ZLR7 823 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 CBWD6Q4V339 395 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 BRDTQ58F21 947 aaPredicted RBP4.34□□□□□ -1.71
PTPN12-208ENST00000447995 CBWD3Q5JTY5 395 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 SPDYCQ5MJ68 293 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 CBWD5Q5RIA9 395 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 NOL9Q5SY16 702 aaKnown RBP4.34□□□□□ -1.71
PTPN12-208ENST00000447995 SEL1L2Q5TEA6 688 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 KRT39Q6A163 491 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 SNRNP48Q6IEG0 339 aaKnown RBP4.34□□□□□ -1.71
PTPN12-208ENST00000447995 MIS18BP1Q6P0N0 1132 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 LRIG3Q6UXM1 1119 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 SLC30A10Q6XR72 485 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 NT5DC3Q86UY8 548 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 CD302Q8IX05 232 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 KLHL7Q8IXQ5 586 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 EFCAB13Q8IY85 973 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 ARFGAP2Q8N6H7 521 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 TMEM161BQ8NDZ6 487 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 CHST13Q8NET6 341 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 LNX1Q8TBB1 728 aaPredicted RBP4.34□□□□□ -1.71
PTPN12-208ENST00000447995 SLC35G2Q8TBE7 412 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 SCFD2Q8WU76 684 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 IFT81Q8WYA0 676 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 BICD1Q96G01 975 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 HES6Q96HZ4 224 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 MS4A14Q96JA4 679 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 CEP170P1Q96L14 293 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 NT5C1BQ96P26 610 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 RPS6KC1Q96S38 1066 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 WRNIP1Q96S55 665 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 MPHOSPH6Q99547 160 aaKnown RBP4.34□□□□□ -1.71
PTPN12-208ENST00000447995 SH3GL2Q99962 352 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 SYT11Q9BT88 431 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 TEX13BQ9BXU2 312 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms