RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 HDAC9Q9UKV0 1011 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 SHOC2Q9UQ13 582 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 NUDCQ9Y266 331 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 MTO1Q9Y2Z2 717 aaKnown RBP5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 LRRC9Q6ZRR7 1453 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 THOC2Q8NI27 1593 aaKnown RBP5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 SPATA31A3Q5VYP0 1347 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 FYCO1Q9BQS8 1478 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 PRXQ9BXM0 1461 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 PRAMEF33A0A0G2JMD5 474 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 LOC102723971A0A1B0GUV8 181 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 A0A1W2PS29 197 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 TOR1BO14657 336 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 HNRNPDLO14979 420 aaKnown RBP5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 ADAMTS3O15072 1205 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 CCP110O43303 1012 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 PRAMEF10O60809 474 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 SUN1O94901 812 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 CFIP05156 583 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 HLA-DOAP06340 250 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 ELANEP08246 267 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 MYL4P12829 197 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 CHRM3P20309 590 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 ACVR2AP27037 513 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 IL1R2P27930 398 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 LRPAP1P30533 357 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 TRAPPC10P48553 1259 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 CXADRP78310 365 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 SLC29A2Q14542 456 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 DHX8Q14562 1220 aaKnown RBP5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 R3HDM1Q15032 1099 aaKnown RBP5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 INSCQ1MX18 579 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 MPEG1Q2M385 716 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 MGAT5BQ3V5L5 792 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 PLA1AQ53H76 456 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 LCE3BQ5TA77 95 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 SLC30A10Q6XR72 485 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 TMPRSS9Q7Z410 1059 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 CERS3Q8IU89 383 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 SYTL1Q8IYJ3 562 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 TMEM132CQ8N3T6 1108 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 ZNF566Q969W8 418 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 CDK5RAP1Q96SZ6 601 aaKnown RBP5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 TTLL2Q9BWV7 592 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 SMOC2Q9H3U7 446 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 GJB4Q9NTQ9 266 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 SMPD4Q9NXE4 827 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 MID2Q9UJV3 735 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 ISY1Q9ULR0 285 aaKnown RBP5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 TESMINQ9Y4I5 508 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 SUPT6HQ7KZ85 1726 aaKnown RBP5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 UNC13AQ9UPW8 1703 aa5.22□□□□□ -1.57
HMGB1P16-201ENST00000447155 A0A087WV62 115 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 MARCH11A6NNE9 402 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 PLA2G6O60733 806 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 FOSP01100 380 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 BTF3P20290 206 aaKnown RBP5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 ITGALP20701 1170 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 PXNP49023 591 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 ZNF134P52741 427 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 RPS7P62081 194 aaKnown RBP5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 DYRK1AQ13627 763 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 ARHGEF7Q14155 803 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 STARD3Q14849 445 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 SPDYE7PQ495Y7 208 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 B3GNTL1Q67FW5 361 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 ARMC6Q6NXE6 501 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 PGBD2Q6P3X8 592 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 ZDHHC24Q6UX98 284 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 KRT28Q7Z3Y7 464 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 VGLL2Q8N8G2 317 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 FRAT1Q92837 279 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 BOD1Q96IK1 185 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 C8orf49Q96NF6 230 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 STK33Q9BYT3 514 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 ZNF703Q9H7S9 590 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 AKIP1Q9NQ31 210 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 TBC1D23Q9NUY8 699 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 PARPBPQ9NWS1 579 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 CAPN11Q9UMQ6 739 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 MAN2B2Q9Y2E5 1009 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 NOX1Q9Y5S8 564 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 NCOA1Q15788 1441 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 AKNAQ7Z591 1439 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 E9PCH4 1651 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 RNF123Q5XPI4 1314 aa5.21□□□□□ -1.58
HMGB1P16-201ENST00000447155 ROCK2O75116 1388 aaKnown RBP5.2□□□□□ -1.58
HMGB1P16-201ENST00000447155 KTN1Q86UP2 1357 aaKnown RBP5.2□□□□□ -1.58
HMGB1P16-201ENST00000447155 MYADML2A6NDP7 307 aa5.2□□□□□ -1.58
HMGB1P16-201ENST00000447155 RAB27BO00194 218 aa5.2□□□□□ -1.58
HMGB1P16-201ENST00000447155 NCR1O76036 304 aa5.2□□□□□ -1.58
HMGB1P16-201ENST00000447155 A1BGP04217 495 aa5.2□□□□□ -1.58
HMGB1P16-201ENST00000447155 TNNT2P45379 298 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P16-201ENST00000447155 CPT1AP50416 773 aa5.2□□□□□ -1.58
HMGB1P16-201ENST00000447155 CTSWP56202 376 aa5.2□□□□□ -1.58
HMGB1P16-201ENST00000447155 LILRA4P59901 499 aa5.2□□□□□ -1.58
HMGB1P16-201ENST00000447155 FAM189BP81408 668 aa5.2□□□□□ -1.58
HMGB1P16-201ENST00000447155 MC2RQ01718 297 aa5.2□□□□□ -1.58
HMGB1P16-201ENST00000447155 KRT17Q04695 432 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms