RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 COTL1Q14019 142 aa9.05□□□□□ -0.96
MCF2L2-203ENST00000447025 ZACNQ401N2 412 aa9.05□□□□□ -0.96
MCF2L2-203ENST00000447025 DALRD3Q5D0E6 543 aaKnown RBP9.05□□□□□ -0.96
MCF2L2-203ENST00000447025 CCNI2Q6ZMN8 369 aaPredicted RBP9.05□□□□□ -0.96
MCF2L2-203ENST00000447025 DCP2Q8IU60 420 aaKnown RBP9.05□□□□□ -0.96
MCF2L2-203ENST00000447025 RFWD2Q8NHY2 731 aa9.05□□□□□ -0.96
MCF2L2-203ENST00000447025 RIN3Q8TB24 985 aa9.05□□□□□ -0.96
MCF2L2-203ENST00000447025 LPGAT1Q92604 370 aa9.05□□□□□ -0.96
MCF2L2-203ENST00000447025 MAP6Q96JE9 813 aa9.05□□□□□ -0.96
MCF2L2-203ENST00000447025 ZNF594Q96JF6 807 aaPredicted RBP9.05□□□□□ -0.96
MCF2L2-203ENST00000447025 TAF1DQ9H5J8 278 aaPredicted RBP9.05□□□□□ -0.96
MCF2L2-203ENST00000447025 GLRX2Q9NS18 164 aa9.05□□□□□ -0.96
MCF2L2-203ENST00000447025 VPS4AQ9UN37 437 aa9.05□□□□□ -0.96
MCF2L2-203ENST00000447025 COG5Q9UP83 839 aa9.05□□□□□ -0.96
MCF2L2-203ENST00000447025 PCDH11XQ9BZA7 1347 aa9.05□□□□□ -0.96
MCF2L2-203ENST00000447025 PCDH11YQ9BZA8 1340 aa9.05□□□□□ -0.96
MCF2L2-203ENST00000447025 DEPDC5O75140 1603 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 IQGAP3Q86VI3 1631 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 E9PCH4 1651 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 BRINP1O60477 761 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 PEX11AO75192 247 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 FUCA1P04066 466 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 POLR2MP0CAP2 368 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 GFAPP14136 432 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 HCAR3P49019 387 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 ASPHQ12797 758 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 PLS1Q14651 629 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 PPP1R26Q5T8A7 1209 aaPredicted RBP9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 MZT2AQ6P582 158 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 OTOP3Q7RTS5 596 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 MIER3Q7Z3K6 550 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 FBXO33Q7Z6M2 555 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 ZDHHC17Q8IUH5 632 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 WDR49Q8IV35 697 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 PCYOX1LQ8NBM8 494 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 OR52K1Q8NGK4 314 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 SYTL5Q8TDW5 730 aaPredicted RBP9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 VPS33AQ96AX1 596 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 SGF29Q96ES7 293 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 NTMT1Q9BV86 223 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 RAB17Q9H0T7 212 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 OR51B5Q9H339 312 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 ELAC1Q9H777 363 aaKnown RBP9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 C10orf88Q9H8K7 445 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 NMRK1Q9NWW6 199 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 TINAGQ9UJW2 476 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 PNMA3Q9UL41 463 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 RPRD2Q5VT52 1461 aaKnown RBP9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 OR6C74A6NCV1 312 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 DBX1A6NMT0 343 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 A8MUI8 341 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 RNMTO43148 476 aaKnown RBP9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 GABBR2O75899 941 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 ASS1P00966 412 aaKnown RBP9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 PIM1P11309 404 aaPredicted RBP9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 CSF2RAP15509 400 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 EEF1GP26641 437 aaKnown RBP9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 HLA-FP30511 346 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 STX2P32856 288 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 GARSP41250 739 aaKnown RBP9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 CRKP46108 304 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 MTIF2P46199 727 aaKnown RBP9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 HARS2P49590 506 aaKnown RBP9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 ARHGDIAP52565 204 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 CYP4F8P98187 520 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 CCINQ13939 588 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 UGP2Q16851 508 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 SPATS1Q496A3 300 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 PXDC1Q5TGL8 231 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 PDPK2PQ6A1A2 396 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 CNSTQ6PJW8 725 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 VSTM4Q8IW00 320 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 ADGRG5Q8IZF4 528 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 FBXL6Q8N531 539 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 SCFD2Q8WU76 684 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 RAB3IPQ96QF0 476 aaPredicted RBP9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 ASCC2Q9H1I8 757 aaPredicted RBP9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 PPANQ9NQ55 473 aaKnown RBP9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 MCM9Q9NXL9 1143 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 STOML1Q9UBI4 398 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 CPNE7Q9UBL6 633 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 PARP2Q9UGN5 583 aa9.04□□□□□ -0.96
MCF2L2-203ENST00000447025 NPHP4O75161 1426 aaPredicted RBP9.03□□□□□ -0.96
MCF2L2-203ENST00000447025 JCADQ9P266 1359 aa9.03□□□□□ -0.96
MCF2L2-203ENST00000447025 TRPC5OSA6NMA1 111 aa9.03□□□□□ -0.96
MCF2L2-203ENST00000447025 RIPK2O43353 540 aa9.03□□□□□ -0.96
MCF2L2-203ENST00000447025 CCNDBP1O95273 360 aa9.03□□□□□ -0.96
MCF2L2-203ENST00000447025 RARAP10276 462 aa9.03□□□□□ -0.96
MCF2L2-203ENST00000447025 CLDN10P78369 228 aa9.03□□□□□ -0.96
MCF2L2-203ENST00000447025 GFPT1Q06210 699 aaPredicted RBP9.03□□□□□ -0.96
MCF2L2-203ENST00000447025 RBL2Q08999 1139 aa9.03□□□□□ -0.96
MCF2L2-203ENST00000447025 VAC14Q08AM6 782 aa9.03□□□□□ -0.96
MCF2L2-203ENST00000447025 MORC3Q14149 939 aa9.03□□□□□ -0.96
MCF2L2-203ENST00000447025 HERC3Q15034 1050 aa9.03□□□□□ -0.96
MCF2L2-203ENST00000447025 EFHC1Q5JVL4 640 aa9.03□□□□□ -0.96
MCF2L2-203ENST00000447025 IFFO2Q5TF58 517 aa9.03□□□□□ -0.96
MCF2L2-203ENST00000447025 USPL1Q5W0Q7 1092 aa9.03□□□□□ -0.96
MCF2L2-203ENST00000447025 AAGABQ6PD74 315 aa9.03□□□□□ -0.96
MCF2L2-203ENST00000447025 CLEC2AQ6UVW9 174 aa9.03□□□□□ -0.96
MCF2L2-203ENST00000447025 ZC3H18Q86VM9 953 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms