RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 USP17L13C9JLJ4 530 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 USP17L11C9JVI0 530 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 USP17L18D6R9N7 530 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 USP17L22D6RA61 530 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 USP17L17D6RBQ6 530 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 USP17L19D6RCP7 530 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 USP17L20D6RJB6 530 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 ZBTB5O15062 677 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 USP17L24Q0WX57 530 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 USP17L6PQ6QN14 398 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 EXOC3L1Q86VI1 746 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 LRRC57Q8N9N7 239 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 SAC3D1A6NKF1 404 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 IREB2P48200 963 aaKnown RBP8.19□□□□□ -1.1
SMG1-202ENST00000446231 RFWD3Q6PCD5 774 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 OTOAQ7RTW8 1153 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 EIF2AK1Q9BQI3 630 aaKnown RBP8.19□□□□□ -1.1
SMG1-202ENST00000446231 AGPAT3Q9NRZ7 376 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 ATP7BP35670 1465 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 F5H423 210 aaPredicted RBP8.19□□□□□ -1.1
SMG1-202ENST00000446231 PAX3P23760 479 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 HPCAP84074 193 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 YWHAHQ04917 246 aaPredicted RBP8.19□□□□□ -1.1
SMG1-202ENST00000446231 TRPC7Q9HCX4 862 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 GRID1Q9ULK0 1009 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 SERPINE1P05121 402 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 RAB14P61106 215 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 SLC25A3Q00325 362 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 TTC7BQ86TV6 843 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 BEST2Q8NFU1 509 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 KRT35Q92764 455 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 TRIM63Q969Q1 353 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 CYP1A2P05177 515 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 DLG4P78352 724 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 SNX17Q15036 470 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 TMEM110Q86TL2 294 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 MAGED4Q96JG8 741 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 SERPINB13Q9UIV8 391 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 SORCS3Q9UPU3 1222 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 DMTF1Q9Y222 760 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 WDR64B1ANS9 1081 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 PROCP04070 461 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 DPYSQ14117 519 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 APOPT1Q96IL0 206 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 WNK4Q96J92 1243 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 WRNIP1Q96S55 665 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 PCDH18Q9HCL0 1135 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 RAB6BQ9NRW1 208 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 FAM237BA0A1B0GVD1 139 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 FECHP22830 423 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 UBAP2LQ14157 1087 aaKnown RBP8.19□□□□□ -1.1
SMG1-202ENST00000446231 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.19□□□□□ -1.1
SMG1-202ENST00000446231 EBF3Q9H4W6 596 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 TBCCD1Q9NVR7 557 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 STK39Q9UEW8 545 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 H0YGN5 161 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 RBAK-RBAKDNI3L0D1 243 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 ASLP04424 464 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 EIF2AK2P19525 551 aaKnown RBP8.19□□□□□ -1.1
SMG1-202ENST00000446231 PACS1Q6VY07 963 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 FAM20AQ96MK3 541 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 MRGBPQ9NV56 204 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 NFS1Q9Y697 457 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 PDK4Q16654 411 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 CDCA2Q69YH5 1023 aaPredicted RBP8.18□□□□□ -1.1
SMG1-202ENST00000446231 LGALS13Q9UHV8 139 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 CCDC33Q8N5R6 958 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 BARX2Q9UMQ3 279 aaPredicted RBP8.18□□□□□ -1.1
SMG1-202ENST00000446231 IRF6O14896 467 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 RFC4P35249 363 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 PERM1Q5SV97 790 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 IRF2BP1Q8IU81 584 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 SAMD9LQ8IVG5 1584 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 METP08581 1390 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 LINC00854A0A1B0GVQ3 168 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 NFIBO00712 420 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 XPOTO43592 962 aaKnown RBP8.18□□□□□ -1.1
SMG1-202ENST00000446231 ISLR2Q6UXK2 745 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 OSBPL11Q9BXB4 747 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 FRMD8P1Q9BZ68 369 aaPredicted RBP8.18□□□□□ -1.1
SMG1-202ENST00000446231 C6orf62Q9GZU0 229 aaPredicted RBP8.18□□□□□ -1.1
SMG1-202ENST00000446231 SLC16A4O15374 487 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 ADRA1DP25100 572 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 ITGA7Q13683 1181 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 N4BP2L1Q5TBK1 243 aaPredicted RBP8.18□□□□□ -1.1
SMG1-202ENST00000446231 GALNT18Q6P9A2 607 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 RNF135Q8IUD6 432 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 RFWD2Q8NHY2 731 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 FAM213AQ9BRX8 229 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 ZNF263O14978 683 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 RIMBP2O15034 1052 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 PKNOX1P55347 436 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 FEZF2Q8TBJ5 459 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 HES6Q96HZ4 224 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 FLT1P17948 1338 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 GTF2H1P32780 548 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 SPOCK2Q92563 424 aa8.18□□□□□ -1.1
SMG1-202ENST00000446231 CLK4Q9HAZ1 481 aaKnown RBP8.18□□□□□ -1.1
SMG1-202ENST00000446231 DIDO1Q9BTC0 2240 aaKnown RBP8.18□□□□□ -1.1
SMG1-202ENST00000446231 SNAP25P60880 206 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms