RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 PECAM1P16284 738 aaPredicted RBP17.37■□□□□ 0.37
TCOF1-206ENST00000445265 VHLP40337 213 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 FMO1Q01740 532 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 NME3Q13232 169 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 SDCCAG3Q96C92 435 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 CLMNQ96JQ2 1002 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 THTPAQ9BU02 230 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 ACTL7BQ9Y614 415 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 TBCCQ15814 346 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 MPZL3Q6UWV2 235 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 CKAP2Q8WWK9 683 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 FAF1Q9UNN5 650 aaPredicted RBP17.37■□□□□ 0.37
TCOF1-206ENST00000445265 AP3B1O00203 1094 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 ADRB2P07550 413 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 VDRP11473 427 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 CUL3Q13618 768 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.37■□□□□ 0.37
TCOF1-206ENST00000445265 TWF2Q6IBS0 349 aaKnown RBP17.37■□□□□ 0.37
TCOF1-206ENST00000445265 ICA1LQ8NDH6 482 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 FSD1LQ9BXM9 530 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 UBXN6Q9BZV1 441 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 DRC3Q9H069 523 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 SLC25A27O95847 323 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 ITGB3P05106 788 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 MMP14P50281 582 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 PAPOLAP51003 745 aaKnown RBP17.37■□□□□ 0.37
TCOF1-206ENST00000445265 PDK2Q15119 407 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 CHI3L2Q15782 390 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 MFSD7Q6UXD7 560 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 ANKRD27Q96NW4 1050 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 DCLRE1BQ9H816 532 aa17.37■□□□□ 0.37
TCOF1-206ENST00000445265 FSCN2O14926 492 aa17.36■□□□□ 0.37
TCOF1-206ENST00000445265 CDC42EP1Q00587 391 aa17.36■□□□□ 0.37
TCOF1-206ENST00000445265 OCRLQ01968 901 aa17.36■□□□□ 0.37
TCOF1-206ENST00000445265 TRIM67Q6ZTA4 783 aa17.36■□□□□ 0.37
TCOF1-206ENST00000445265 GEMIN8Q9NWZ8 242 aaKnown RBP17.36■□□□□ 0.37
TCOF1-206ENST00000445265 ERAP1Q9NZ08 941 aa17.36■□□□□ 0.37
TCOF1-206ENST00000445265 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.36■□□□□ 0.37
TCOF1-206ENST00000445265 IGKV6D-41A0A0C4DH26 115 aa17.36■□□□□ 0.37
TCOF1-206ENST00000445265 ACADSBP45954 432 aa17.36■□□□□ 0.37
TCOF1-206ENST00000445265 MDH1BQ5I0G3 518 aa17.36■□□□□ 0.37
TCOF1-206ENST00000445265 ANGEL2Q5VTE6 544 aaKnown RBP17.36■□□□□ 0.37
TCOF1-206ENST00000445265 CNPY3Q9BT09 278 aa17.36■□□□□ 0.37
TCOF1-206ENST00000445265 MMP13P45452 471 aa17.36■□□□□ 0.37
TCOF1-206ENST00000445265 SLC26A11Q86WA9 606 aa17.36■□□□□ 0.37
TCOF1-206ENST00000445265 ACP6Q9NPH0 428 aa17.36■□□□□ 0.37
TCOF1-206ENST00000445265 GTSE1Q9NYZ3 720 aa17.36■□□□□ 0.37
TCOF1-206ENST00000445265 UBIAD1Q9Y5Z9 338 aa17.36■□□□□ 0.37
TCOF1-206ENST00000445265 DDX3YO15523 660 aaKnown RBP17.36■□□□□ 0.37
TCOF1-206ENST00000445265 PTPN4P29074 926 aa17.36■□□□□ 0.37
TCOF1-206ENST00000445265 JAM2P57087 298 aa17.36■□□□□ 0.37
TCOF1-206ENST00000445265 FASTKD5Q7L8L6 764 aaKnown RBP17.36■□□□□ 0.37
TCOF1-206ENST00000445265 TMEM161BQ8NDZ6 487 aa17.36■□□□□ 0.37
TCOF1-206ENST00000445265 CMTM5Q96DZ9 223 aa17.36■□□□□ 0.37
TCOF1-206ENST00000445265 SPRP35270 261 aaPredicted RBP17.35■□□□□ 0.37
TCOF1-206ENST00000445265 GMPSP49915 693 aaPredicted RBP17.35■□□□□ 0.37
TCOF1-206ENST00000445265 DAB2IPQ5VWQ8 1189 aa17.35■□□□□ 0.37
TCOF1-206ENST00000445265 KCNK16Q96T55 309 aa17.35■□□□□ 0.37
TCOF1-206ENST00000445265 VPS33BQ9H267 617 aa17.35■□□□□ 0.37
TCOF1-206ENST00000445265 FAM49BQ9NUQ9 324 aa17.35■□□□□ 0.37
TCOF1-206ENST00000445265 DNPEPQ9ULA0 475 aa17.35■□□□□ 0.37
TCOF1-206ENST00000445265 FANCGO15287 622 aa17.35■□□□□ 0.37
TCOF1-206ENST00000445265 SLURP2P0DP57 97 aa17.35■□□□□ 0.37
TCOF1-206ENST00000445265 FLT3P36888 993 aa17.35■□□□□ 0.37
TCOF1-206ENST00000445265 SULT1E1P49888 294 aa17.35■□□□□ 0.37
TCOF1-206ENST00000445265 ELF3P78545 371 aaPredicted RBP17.35■□□□□ 0.37
TCOF1-206ENST00000445265 PDK1Q15118 436 aa17.35■□□□□ 0.37
TCOF1-206ENST00000445265 MROH9Q5TGP6 573 aa17.35■□□□□ 0.37
TCOF1-206ENST00000445265 CYP2C8P10632 490 aa17.35■□□□□ 0.37
TCOF1-206ENST00000445265 GNAT1P11488 350 aa17.35■□□□□ 0.37
TCOF1-206ENST00000445265 NLRP11P59045 1033 aaKnown RBP17.35■□□□□ 0.37
TCOF1-206ENST00000445265 GOLGA7BQ2TAP0 167 aa17.35■□□□□ 0.37
TCOF1-206ENST00000445265 ZPBP2Q6X784 338 aa17.35■□□□□ 0.37
TCOF1-206ENST00000445265 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.35■□□□□ 0.37
TCOF1-206ENST00000445265 SUDS3Q9H7L9 328 aaPredicted RBP17.35■□□□□ 0.37
TCOF1-206ENST00000445265 HACL1Q9UJ83 578 aa17.35■□□□□ 0.37
TCOF1-206ENST00000445265 USP18Q9UMW8 372 aa17.35■□□□□ 0.37
TCOF1-206ENST00000445265 POLBP06746 335 aa17.35■□□□□ 0.37
TCOF1-206ENST00000445265 RARS2Q5T160 578 aaKnown RBP17.35■□□□□ 0.37
TCOF1-206ENST00000445265 PRPF39Q86UA1 669 aaKnown RBP17.35■□□□□ 0.37
TCOF1-206ENST00000445265 TRIML2Q8N7C3 387 aa17.35■□□□□ 0.37
TCOF1-206ENST00000445265 TTC8Q8TAM2 541 aa17.35■□□□□ 0.37
TCOF1-206ENST00000445265 FGD4Q96M96 766 aa17.35■□□□□ 0.37
TCOF1-206ENST00000445265 EPAS1Q99814 870 aa17.35■□□□□ 0.37
TCOF1-206ENST00000445265 CPSF3Q9UKF6 684 aaKnown RBP17.35■□□□□ 0.37
TCOF1-206ENST00000445265 ATP9BO43861 1147 aa17.34■□□□□ 0.37
TCOF1-206ENST00000445265 ITGB5P18084 799 aa17.34■□□□□ 0.37
TCOF1-206ENST00000445265 TPI1P60174 286 aa17.34■□□□□ 0.37
TCOF1-206ENST00000445265 MTDHQ86UE4 582 aaKnown RBP17.34■□□□□ 0.37
TCOF1-206ENST00000445265 APBB2Q92870 758 aa17.34■□□□□ 0.37
TCOF1-206ENST00000445265 ABCF3Q9NUQ8 709 aa17.34■□□□□ 0.37
TCOF1-206ENST00000445265 VWA5AO00534 786 aa17.34■□□□□ 0.37
TCOF1-206ENST00000445265 ACADSP16219 412 aa17.34■□□□□ 0.37
TCOF1-206ENST00000445265 CALB2P22676 271 aa17.34■□□□□ 0.37
TCOF1-206ENST00000445265 DYNC1I2Q13409 638 aaKnown RBP17.34■□□□□ 0.37
TCOF1-206ENST00000445265 MTFR1Q15390 333 aa17.34■□□□□ 0.37
TCOF1-206ENST00000445265 TEDDM1Q5T9Z0 273 aa17.34■□□□□ 0.37
TCOF1-206ENST00000445265 PTF1AQ7RTS3 328 aa17.34■□□□□ 0.37
TCOF1-206ENST00000445265 CDR2LQ86X02 465 aaPredicted RBP17.34■□□□□ 0.37
TCOF1-206ENST00000445265 CYP3A43Q9HB55 503 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms