RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 TSPY1Q01534 308 aa16.04■□□□□ 0.16
CCNE1-203ENST00000444983 GPM6BQ13491 265 aa16.04■□□□□ 0.16
CCNE1-203ENST00000444983 MAPRE1Q15691 268 aaKnown RBP16.04■□□□□ 0.16
CCNE1-203ENST00000444983 TDRD12Q587J7 1177 aaKnown RBP16.04■□□□□ 0.16
CCNE1-203ENST00000444983 RAD9BQ6WBX8 426 aa16.04■□□□□ 0.16
CCNE1-203ENST00000444983 GLYCTKQ8IVS8 523 aa16.04■□□□□ 0.16
CCNE1-203ENST00000444983 WDTC1Q8N5D0 677 aa16.04■□□□□ 0.16
CCNE1-203ENST00000444983 MRPL43Q8N983 215 aaKnown RBP16.04■□□□□ 0.16
CCNE1-203ENST00000444983 SLC2A14Q8TDB8 520 aa16.04■□□□□ 0.16
CCNE1-203ENST00000444983 AUTS2Q8WXX7 1259 aa16.04■□□□□ 0.16
CCNE1-203ENST00000444983 TCF25Q9BQ70 676 aa16.04■□□□□ 0.16
CCNE1-203ENST00000444983 LHX5Q9H2C1 402 aa16.04■□□□□ 0.16
CCNE1-203ENST00000444983 TLR9Q9NR96 1032 aa16.04■□□□□ 0.16
CCNE1-203ENST00000444983 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCNE1-203ENST00000444983 ADAMTS1Q9UHI8 967 aa16.04■□□□□ 0.16
CCNE1-203ENST00000444983 WDR27A2RRH5 827 aa16.03■□□□□ 0.16
CCNE1-203ENST00000444983 EPOPA6NHQ4 379 aa16.03■□□□□ 0.16
CCNE1-203ENST00000444983 SOWAHDA6NJG2 315 aa16.03■□□□□ 0.16
CCNE1-203ENST00000444983 LPXNO60711 386 aa16.03■□□□□ 0.16
CCNE1-203ENST00000444983 PTMAP06454 111 aaKnown RBP16.03■□□□□ 0.16
CCNE1-203ENST00000444983 UNGP13051 313 aaPredicted RBP16.03■□□□□ 0.16
CCNE1-203ENST00000444983 OR1D2P34982 312 aa16.03■□□□□ 0.16
CCNE1-203ENST00000444983 GPD2P43304 727 aa16.03■□□□□ 0.16
CCNE1-203ENST00000444983 ROR1Q01973 937 aa16.03■□□□□ 0.16
CCNE1-203ENST00000444983 SMARCB1Q12824 385 aa16.03■□□□□ 0.16
CCNE1-203ENST00000444983 RAB33AQ14088 237 aa16.03■□□□□ 0.16
CCNE1-203ENST00000444983 CFAP221Q4G0U5 840 aa16.03■□□□□ 0.16
CCNE1-203ENST00000444983 TAF3Q5VWG9 929 aa16.03■□□□□ 0.16
CCNE1-203ENST00000444983 TMC7Q7Z402 723 aa16.03■□□□□ 0.16
CCNE1-203ENST00000444983 TTC30AQ86WT1 665 aa16.03■□□□□ 0.16
CCNE1-203ENST00000444983 CCDC170Q8IYT3 715 aa16.03■□□□□ 0.16
CCNE1-203ENST00000444983 DCP1BQ8IZD4 617 aaKnown RBP16.03■□□□□ 0.16
CCNE1-203ENST00000444983 ANKRD52Q8NB46 1076 aa16.03■□□□□ 0.16
CCNE1-203ENST00000444983 CERS4Q9HA82 394 aa16.03■□□□□ 0.16
CCNE1-203ENST00000444983 NGRNQ9NPE2 291 aaKnown RBP16.03■□□□□ 0.16
CCNE1-203ENST00000444983 C2orf71A6NGG8 1288 aa16.02■□□□□ 0.16
CCNE1-203ENST00000444983 ZNF263O14978 683 aa16.02■□□□□ 0.16
CCNE1-203ENST00000444983 TEX28O15482 410 aa16.02■□□□□ 0.16
CCNE1-203ENST00000444983 MICAL2O94851 1124 aa16.02■□□□□ 0.16
CCNE1-203ENST00000444983 CXCL14O95715 111 aa16.02■□□□□ 0.16
CCNE1-203ENST00000444983 CNPP09543 421 aaKnown RBP16.02■□□□□ 0.16
CCNE1-203ENST00000444983 GZMAP12544 262 aa16.02■□□□□ 0.16
CCNE1-203ENST00000444983 CREMQ03060 361 aa16.02■□□□□ 0.16
CCNE1-203ENST00000444983 MTF1Q14872 753 aa16.02■□□□□ 0.16
CCNE1-203ENST00000444983 SLC18A3Q16572 532 aa16.02■□□□□ 0.16
CCNE1-203ENST00000444983 NFE2Q16621 373 aaPredicted RBP16.02■□□□□ 0.16
CCNE1-203ENST00000444983 SLC39A12Q504Y0 691 aa16.02■□□□□ 0.16
CCNE1-203ENST00000444983 PRPF38BQ5VTL8 546 aaKnown RBP16.02■□□□□ 0.16
CCNE1-203ENST00000444983 ZNF461Q8TAF7 563 aa16.02■□□□□ 0.16
CCNE1-203ENST00000444983 MYLPFQ96A32 169 aa16.02■□□□□ 0.16
CCNE1-203ENST00000444983 FUBP3Q96I24 572 aaKnown RBP eCLIP16.02■□□□□ 0.16
CCNE1-203ENST00000444983 CCDC42Q96M95 316 aa16.02■□□□□ 0.16
CCNE1-203ENST00000444983 ZNF830Q96NB3 372 aaPredicted RBP16.02■□□□□ 0.16
CCNE1-203ENST00000444983 CSNK1G1Q9HCP0 422 aa16.02■□□□□ 0.16
CCNE1-203ENST00000444983 TMEM30AQ9NV96 361 aa16.02■□□□□ 0.16
CCNE1-203ENST00000444983 HIDE1A8MVS5 230 aa16.02■□□□□ 0.15
CCNE1-203ENST00000444983 CLDN5O00501 218 aa16.02■□□□□ 0.15
CCNE1-203ENST00000444983 ARHGAP6O43182 974 aa16.02■□□□□ 0.15
CCNE1-203ENST00000444983 TNFAIP3P21580 790 aa16.02■□□□□ 0.15
CCNE1-203ENST00000444983 IRS1P35568 1242 aa16.02■□□□□ 0.15
CCNE1-203ENST00000444983 KIF11P52732 1056 aa16.02■□□□□ 0.15
CCNE1-203ENST00000444983 SMC1AQ14683 1233 aaKnown RBP16.02■□□□□ 0.15
CCNE1-203ENST00000444983 PDE12Q6L8Q7 609 aaKnown RBP16.02■□□□□ 0.15
CCNE1-203ENST00000444983 TRIM72Q6ZMU5 477 aa16.02■□□□□ 0.15
CCNE1-203ENST00000444983 C2orf15Q8WU43 125 aaKnown RBP16.02■□□□□ 0.15
CCNE1-203ENST00000444983 SLC35F5Q8WV83 523 aa16.02■□□□□ 0.15
CCNE1-203ENST00000444983 ARNTL2Q8WYA1 636 aa16.02■□□□□ 0.15
CCNE1-203ENST00000444983 DUSP16Q9BY84 665 aa16.02■□□□□ 0.15
CCNE1-203ENST00000444983 ZNF518BQ9C0D4 1074 aa16.02■□□□□ 0.15
CCNE1-203ENST00000444983 LMAN2LQ9H0V9 348 aa16.02■□□□□ 0.15
CCNE1-203ENST00000444983 ABCB6Q9NP58 842 aa16.02■□□□□ 0.15
CCNE1-203ENST00000444983 CYTH4Q9UIA0 394 aa16.02■□□□□ 0.15
CCNE1-203ENST00000444983 NAGPAQ9UK23 515 aa16.02■□□□□ 0.15
CCNE1-203ENST00000444983 EPN1Q9Y6I3 576 aaPredicted RBP16.02■□□□□ 0.15
CCNE1-203ENST00000444983 MYO7AQ13402 2215 aa16.01■□□□□ 0.15
CCNE1-203ENST00000444983 COL4A4P53420 1690 aaPredicted RBP16.01■□□□□ 0.15
CCNE1-203ENST00000444983 MTMR11A4FU01 709 aa16.01■□□□□ 0.15
CCNE1-203ENST00000444983 BEST1O76090 585 aa16.01■□□□□ 0.15
CCNE1-203ENST00000444983 NDUFA10O95299 355 aa16.01■□□□□ 0.15
CCNE1-203ENST00000444983 LSM8O95777 96 aaKnown RBP16.01■□□□□ 0.15
CCNE1-203ENST00000444983 SSTR3P32745 418 aaPredicted RBP16.01■□□□□ 0.15
CCNE1-203ENST00000444983 RPL34P49207 117 aaKnown RBP16.01■□□□□ 0.15
CCNE1-203ENST00000444983 NDUFV1P49821 464 aa16.01■□□□□ 0.15
CCNE1-203ENST00000444983 CACNA2D1P54289 1103 aa16.01■□□□□ 0.15
CCNE1-203ENST00000444983 NOMO3P69849 1222 aa16.01■□□□□ 0.15
CCNE1-203ENST00000444983 GFPT1Q06210 699 aaPredicted RBP16.01■□□□□ 0.15
CCNE1-203ENST00000444983 CLEC16AQ2KHT3 1053 aa16.01■□□□□ 0.15
CCNE1-203ENST00000444983 GOLGA7BQ2TAP0 167 aa16.01■□□□□ 0.15
CCNE1-203ENST00000444983 TPGS2Q68CL5 300 aa16.01■□□□□ 0.15
CCNE1-203ENST00000444983 DENND1BQ6P3S1 775 aa16.01■□□□□ 0.15
CCNE1-203ENST00000444983 LILRA6Q6PI73 481 aa16.01■□□□□ 0.15
CCNE1-203ENST00000444983 RNF19BQ6ZMZ0 732 aa16.01■□□□□ 0.15
CCNE1-203ENST00000444983 C4orf50Q6ZRC1 276 aa16.01■□□□□ 0.15
CCNE1-203ENST00000444983 CLEC20AQ6ZU45 233 aa16.01■□□□□ 0.15
CCNE1-203ENST00000444983 FAM35AQ86V20 835 aa16.01■□□□□ 0.15
CCNE1-203ENST00000444983 VPS36Q86VN1 386 aa16.01■□□□□ 0.15
CCNE1-203ENST00000444983 ZMIZ2Q8NF64 920 aa16.01■□□□□ 0.15
CCNE1-203ENST00000444983 KLHL5Q96PQ7 755 aa16.01■□□□□ 0.15
CCNE1-203ENST00000444983 CRISPLD1Q9H336 500 aa16.01■□□□□ 0.15
CCNE1-203ENST00000444983 ENTPD7Q9NQZ7 604 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms