RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 CCL26Q9Y258 94 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 A0A1W2PQ27 194 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 A0A1W2PQ64 194 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 A0A1W2PQD8 194 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 FAM170BA6NMN3 283 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 SLC38A8A6NNN8 435 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 RHOBTB3O94955 611 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 C4BPAP04003 597 aaKnown RBP11.64□□□□□ -0.55
SF3A1-203ENST00000444440 RAP1GAPP47736 663 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 CDH8P55286 799 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 CLDN10P78369 228 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 FCHO2Q0JRZ9 810 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 SMARCB1Q12824 385 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 MYO1EQ12965 1108 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 VEPH1Q14D04 833 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 NFE2Q16621 373 aaPredicted RBP11.64□□□□□ -0.55
SF3A1-203ENST00000444440 CFAP221Q4G0U5 840 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 DPH6Q7L8W6 267 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 SLC9A9Q8IVB4 645 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 MAB21L3Q8N8X9 362 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 TTC8Q8TAM2 541 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 SPATA18Q8TC71 538 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 DEPDC1BQ8WUY9 529 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 SHDQ96IW2 340 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 SLC22A12Q96S37 553 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 MMS19Q96T76 1030 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 GPR88Q9GZN0 384 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 TASP1Q9H6P5 420 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 SMYD3Q9H7B4 428 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 CGNQ9P2M7 1197 aaKnown RBP11.64□□□□□ -0.55
SF3A1-203ENST00000444440 USP25Q9UHP3 1055 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 NDRG2Q9UN36 371 aaKnown RBP11.64□□□□□ -0.55
SF3A1-203ENST00000444440 FAM186AA6NE01 2351 aa11.64□□□□□ -0.55
SF3A1-203ENST00000444440 PRR23AA6NEV1 266 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 ZNF263O14978 683 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 GFRA3O60609 400 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 NOL4O94818 638 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 ZNF202O95125 648 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 NR3C1P04150 777 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 SP9P0CG40 484 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 BDNFP23560 247 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 PCSK1P29120 753 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 CDC25CP30307 473 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 USP46P62068 366 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 TNK2Q07912 1038 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 PSMD2Q13200 908 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 WDR72Q3MJ13 1102 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 MDH1BQ5I0G3 518 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 TXNDC8Q6A555 127 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 TXNDC11Q6PKC3 985 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 SPATA2LQ8IUW3 424 aaPredicted RBP11.63□□□□□ -0.55
SF3A1-203ENST00000444440 C1orf210Q8IVY1 113 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 SMYD4Q8IYR2 804 aaPredicted RBP11.63□□□□□ -0.55
SF3A1-203ENST00000444440 TMEM174Q8WUU8 243 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 IRF7Q92985 503 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 CLDN23Q96B33 292 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 CHFRQ96EP1 664 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 PCED1BQ96HM7 432 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 ABCB6Q9NP58 842 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 TRPV5Q9NQA5 729 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 GTSE1Q9NYZ3 720 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 NXF1Q9UBU9 619 aaKnown RBP11.63□□□□□ -0.55
SF3A1-203ENST00000444440 CDH9Q9ULB4 789 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 PIAS3Q9Y6X2 628 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 R4GN57 208 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 SPAG17Q6Q759 2223 aa11.63□□□□□ -0.55
SF3A1-203ENST00000444440 OTOL1A6NHN0 477 aaPredicted RBP11.62□□□□□ -0.55
SF3A1-203ENST00000444440 CLDN5O00501 218 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 PDXKO00764 312 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 CHADO15335 359 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 TACC1O75410 805 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 STAU1O95793 577 aaKnown RBP11.62□□□□□ -0.55
SF3A1-203ENST00000444440 MYL1P05976 194 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 CSH1P0DML2 217 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 CSH2P0DML3 217 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 WEE1P30291 646 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 HOXC13P31276 330 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 MAGEA11P43364 429 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 CYP27A1Q02318 531 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 PNOCQ13519 176 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 ZCWPW2Q504Y3 356 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 ARHGAP15Q53QZ3 475 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 SPOPLQ6IQ16 392 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 TSSK4Q6SA08 328 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 SCARA5Q6ZMJ2 495 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 SCN4BQ8IWT1 228 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 CMTM8Q8IZV2 173 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 FMR1NBQ8N0W7 255 aaPredicted RBP11.62□□□□□ -0.55
SF3A1-203ENST00000444440 ENGASEQ8NFI3 743 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 MYCBPAPQ8TBZ2 947 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 ERCC4Q92889 916 aaPredicted RBP11.62□□□□□ -0.55
SF3A1-203ENST00000444440 USP13Q92995 863 aaPredicted RBP11.62□□□□□ -0.55
SF3A1-203ENST00000444440 TRMT2BQ96GJ1 504 aaKnown RBP11.62□□□□□ -0.55
SF3A1-203ENST00000444440 FUBP3Q96I24 572 aaKnown RBP eCLIP11.62□□□□□ -0.55
SF3A1-203ENST00000444440 MYRFLQ96LU7 910 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 B3GNT5Q9BYG0 378 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 OSBPL6Q9BZF3 934 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 IRF2BPLQ9H1B7 796 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.62□□□□□ -0.559e-7■■■■■ 64.9
SF3A1-203ENST00000444440 HMGXB4Q9UGU5 601 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms