RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 SLC44A4Q53GD3 710 aa23.64■■□□□ 1.37
HDLBP-220ENST00000442730 ZNF658Q5TYW1 1059 aaPredicted RBP23.64■■□□□ 1.37
HDLBP-220ENST00000442730 INTS8Q75QN2 995 aaKnown RBP23.64■■□□□ 1.37
HDLBP-220ENST00000442730 SV2AQ7L0J3 742 aa23.64■■□□□ 1.37
HDLBP-220ENST00000442730 FAM186BQ8IYM0 893 aa23.64■■□□□ 1.37
HDLBP-220ENST00000442730 OR6B3Q8NGW1 331 aa23.64■■□□□ 1.37
HDLBP-220ENST00000442730 MYCBPAPQ8TBZ2 947 aa23.64■■□□□ 1.37
HDLBP-220ENST00000442730 DEPDC1BQ8WUY9 529 aa23.64■■□□□ 1.37
HDLBP-220ENST00000442730 DNASE1L2Q92874 299 aa23.64■■□□□ 1.37
HDLBP-220ENST00000442730 ELMO3Q96BJ8 720 aa23.64■■□□□ 1.37
HDLBP-220ENST00000442730 SHDQ96IW2 340 aa23.64■■□□□ 1.37
HDLBP-220ENST00000442730 TRMT61BQ9BVS5 477 aaKnown RBP23.64■■□□□ 1.37
HDLBP-220ENST00000442730 PCDHA5Q9Y5H7 936 aa23.64■■□□□ 1.37
HDLBP-220ENST00000442730 HEPACAM2A8MVW5 462 aa23.63■■□□□ 1.37
HDLBP-220ENST00000442730 STK25O00506 426 aa23.63■■□□□ 1.37
HDLBP-220ENST00000442730 PRAMEF12O95522 483 aa23.63■■□□□ 1.37
HDLBP-220ENST00000442730 TRIM49P0CI25 452 aa23.63■■□□□ 1.37
HDLBP-220ENST00000442730 TRIM49CP0CI26 452 aa23.63■■□□□ 1.37
HDLBP-220ENST00000442730 CSH1P0DML2 217 aa23.63■■□□□ 1.37
HDLBP-220ENST00000442730 CSH2P0DML3 217 aa23.63■■□□□ 1.37
HDLBP-220ENST00000442730 PSMC2P35998 433 aaKnown RBP23.63■■□□□ 1.37
HDLBP-220ENST00000442730 PRCPP42785 496 aa23.63■■□□□ 1.37
HDLBP-220ENST00000442730 PRKCQQ04759 706 aa23.63■■□□□ 1.37
HDLBP-220ENST00000442730 ENPEPQ07075 957 aa23.63■■□□□ 1.37
HDLBP-220ENST00000442730 ADAM9Q13443 819 aa23.63■■□□□ 1.37
HDLBP-220ENST00000442730 COBLL1Q53SF7 1204 aa23.63■■□□□ 1.37
HDLBP-220ENST00000442730 ZNF667Q5HYK9 610 aa23.63■■□□□ 1.37
HDLBP-220ENST00000442730 MDH1BQ5I0G3 518 aa23.63■■□□□ 1.37
HDLBP-220ENST00000442730 ARID3BQ8IVW6 561 aaPredicted RBP23.63■■□□□ 1.37
HDLBP-220ENST00000442730 CCDC105Q8IYK2 499 aa23.63■■□□□ 1.37
HDLBP-220ENST00000442730 NUP210Q8TEM1 1887 aaPredicted RBP23.63■■□□□ 1.37
HDLBP-220ENST00000442730 SMARCE1Q969G3 411 aa23.63■■□□□ 1.37
HDLBP-220ENST00000442730 E2F7Q96AV8 911 aa23.63■■□□□ 1.37
HDLBP-220ENST00000442730 TRMT2BQ96GJ1 504 aaKnown RBP23.63■■□□□ 1.37
HDLBP-220ENST00000442730 PCED1BQ96HM7 432 aa23.63■■□□□ 1.37
HDLBP-220ENST00000442730 FOXQ1Q9C009 403 aa23.63■■□□□ 1.37
HDLBP-220ENST00000442730 DPEP3Q9H4B8 488 aa23.63■■□□□ 1.37
HDLBP-220ENST00000442730 TASP1Q9H6P5 420 aa23.63■■□□□ 1.37
HDLBP-220ENST00000442730 MAGEC2Q9UBF1 373 aaPredicted RBP23.63■■□□□ 1.37
HDLBP-220ENST00000442730 HOOK1Q9UJC3 728 aaKnown RBP23.63■■□□□ 1.37
HDLBP-220ENST00000442730 SLC38A8A6NNN8 435 aa23.62■■□□□ 1.37
HDLBP-220ENST00000442730 GADD45BO75293 160 aaPredicted RBP23.62■■□□□ 1.37
HDLBP-220ENST00000442730 CLSTN1O94985 981 aa23.62■■□□□ 1.37
HDLBP-220ENST00000442730 F11P03951 625 aa23.62■■□□□ 1.37
HDLBP-220ENST00000442730 WEE1P30291 646 aa23.62■■□□□ 1.37
HDLBP-220ENST00000442730 RAP1GAPP47736 663 aa23.62■■□□□ 1.37
HDLBP-220ENST00000442730 CYP27A1Q02318 531 aa23.62■■□□□ 1.37
HDLBP-220ENST00000442730 VSTM1Q6UX27 236 aa23.62■■□□□ 1.37
HDLBP-220ENST00000442730 SCARA5Q6ZMJ2 495 aa23.62■■□□□ 1.37
HDLBP-220ENST00000442730 MFSD6LQ8IWD5 586 aa23.62■■□□□ 1.37
HDLBP-220ENST00000442730 SCN4BQ8IWT1 228 aa23.62■■□□□ 1.37
HDLBP-220ENST00000442730 ELOA2Q8IYF1 753 aaPredicted RBP23.62■■□□□ 1.37
HDLBP-220ENST00000442730 PJA1Q8NG27 643 aa23.62■■□□□ 1.37
HDLBP-220ENST00000442730 MYRFLQ96LU7 910 aa23.62■■□□□ 1.37
HDLBP-220ENST00000442730 BRD9Q9H8M2 597 aa23.62■■□□□ 1.37
HDLBP-220ENST00000442730 HEBP1Q9NRV9 189 aa23.62■■□□□ 1.37
HDLBP-220ENST00000442730 MAGED2Q9UNF1 606 aaPredicted RBP23.62■■□□□ 1.37
HDLBP-220ENST00000442730 A8MXQ7 604 aa23.61■■□□□ 1.37
HDLBP-220ENST00000442730 KINO60870 393 aaKnown RBP23.61■■□□□ 1.37
HDLBP-220ENST00000442730 TADA3O75528 432 aa23.61■■□□□ 1.37
HDLBP-220ENST00000442730 ASS1P00966 412 aaKnown RBP23.61■■□□□ 1.37
HDLBP-220ENST00000442730 KRT13P13646 458 aa23.61■■□□□ 1.37
HDLBP-220ENST00000442730 PTPN1P18031 435 aaKnown RBP23.61■■□□□ 1.37
HDLBP-220ENST00000442730 BDNFP23560 247 aa23.61■■□□□ 1.37
HDLBP-220ENST00000442730 GDI1P31150 447 aa23.61■■□□□ 1.37
HDLBP-220ENST00000442730 PIK3CAP42336 1068 aa23.61■■□□□ 1.37
HDLBP-220ENST00000442730 GCLMP48507 274 aa23.61■■□□□ 1.37
HDLBP-220ENST00000442730 CDH8P55286 799 aa23.61■■□□□ 1.37
HDLBP-220ENST00000442730 PPP3CAQ08209 521 aa23.61■■□□□ 1.37
HDLBP-220ENST00000442730 FCHO2Q0JRZ9 810 aa23.61■■□□□ 1.37
HDLBP-220ENST00000442730 GPIHBP1Q8IV16 184 aa23.61■■□□□ 1.37
HDLBP-220ENST00000442730 B3GALNT2Q8NCR0 500 aa23.61■■□□□ 1.37
HDLBP-220ENST00000442730 TAF4BQ92750 862 aa23.61■■□□□ 1.37
HDLBP-220ENST00000442730 SLC46A2Q9BY10 475 aa23.61■■□□□ 1.37
HDLBP-220ENST00000442730 SDCBP2Q9H190 292 aa23.61■■□□□ 1.37
HDLBP-220ENST00000442730 PTPRDP23468 1912 aa23.61■■□□□ 1.37
HDLBP-220ENST00000442730 KANSL1LA0AUZ9 987 aa23.6■■□□□ 1.37
HDLBP-220ENST00000442730 ARNTLO00327 626 aa23.6■■□□□ 1.37
HDLBP-220ENST00000442730 HLA-DRAP01903 254 aa23.6■■□□□ 1.37
HDLBP-220ENST00000442730 MCCD1P59942 119 aaPredicted RBP23.6■■□□□ 1.37
HDLBP-220ENST00000442730 SGSM1Q2NKQ1 1148 aa23.6■■□□□ 1.37
HDLBP-220ENST00000442730 TPRG1Q6ZUI0 275 aa23.6■■□□□ 1.37
HDLBP-220ENST00000442730 DTWD2Q8NBA8 298 aa23.6■■□□□ 1.37
HDLBP-220ENST00000442730 IRF7Q92985 503 aa23.6■■□□□ 1.37
HDLBP-220ENST00000442730 EEF2KMTQ96G04 330 aa23.6■■□□□ 1.37
HDLBP-220ENST00000442730 SPATA17Q96L03 361 aa23.6■■□□□ 1.37
HDLBP-220ENST00000442730 LRRC3BQ96PB8 259 aa23.6■■□□□ 1.37
HDLBP-220ENST00000442730 TRPV5Q9NQA5 729 aa23.6■■□□□ 1.37
HDLBP-220ENST00000442730 DLGAP2Q9P1A6 1054 aa23.6■■□□□ 1.37
HDLBP-220ENST00000442730 UXTQ9UBK9 157 aaPredicted RBP23.6■■□□□ 1.37
HDLBP-220ENST00000442730 ZMYM5Q9UJ78 669 aa23.6■■□□□ 1.37
HDLBP-220ENST00000442730 SIT1Q9Y3P8 196 aa23.6■■□□□ 1.37
HDLBP-220ENST00000442730 OBSL1O75147 1896 aa23.6■■□□□ 1.37
HDLBP-220ENST00000442730 SHISA7A6NL88 538 aa23.59■■□□□ 1.37
HDLBP-220ENST00000442730 P4HA1P13674 534 aa23.59■■□□□ 1.37
HDLBP-220ENST00000442730 DDX6P26196 483 aaKnown RBP eCLIP23.59■■□□□ 1.37
HDLBP-220ENST00000442730 ASPAP45381 313 aa23.59■■□□□ 1.37
HDLBP-220ENST00000442730 SPOPLQ6IQ16 392 aa23.59■■□□□ 1.37
HDLBP-220ENST00000442730 ZC3H3Q8IXZ2 948 aaKnown RBP23.59■■□□□ 1.37
HDLBP-220ENST00000442730 ADSSL1Q8N142 457 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms