RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 RFKQ969G6 155 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 INPP4AQ96PE3 977 aaPredicted RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 ARMC7Q9H6L4 198 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 KBTBD4Q9NVX7 518 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 GDAP2Q9NXN4 497 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 PCDH10Q9P2E7 1040 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 CLEC4AQ9UMR7 237 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 ISPDA4D126 451 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 CAPN14A8MX76 684 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 PLD2O14939 933 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 INPPL1O15357 1258 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 CFLARO15519 480 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 RCAN1P53805 252 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 RNF4P78317 190 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 OCRLQ01968 901 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 PRKCQQ04759 706 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 EHHADHQ08426 723 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 PUM3Q15397 648 aaKnown RBP5.81□□□□□ -1.48
PTPRC-209ENST00000442510 DGUOKQ16854 277 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 ANO4Q32M45 955 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 ZNF829Q3KNS6 432 aaPredicted RBP5.81□□□□□ -1.48
PTPRC-209ENST00000442510 BRDTQ58F21 947 aaPredicted RBP5.81□□□□□ -1.48
PTPRC-209ENST00000442510 TNFAIP8L3Q5GJ75 292 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 MPP7Q5T2T1 576 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 GPATCH4Q5T3I0 446 aaKnown RBP5.81□□□□□ -1.48
PTPRC-209ENST00000442510 KRT79Q5XKE5 535 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 SNRNP48Q6IEG0 339 aaKnown RBP5.81□□□□□ -1.48
PTPRC-209ENST00000442510 SLC30A10Q6XR72 485 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 SLC51BQ86UW2 128 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 NELFCDQ8IXH7 590 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 GALNT12Q8IXK2 581 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 LNX2Q8N448 690 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 GANCQ8TET4 914 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 JADE3Q92613 823 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 SRPK1Q96SB4 655 aaKnown RBP5.81□□□□□ -1.48
PTPRC-209ENST00000442510 KCNK16Q96T55 309 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 PRMT8Q9NR22 394 aaPredicted RBP5.81□□□□□ -1.48
PTPRC-209ENST00000442510 ABCB10Q9NRK6 738 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 MAP3K13O43283 966 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 BUB1O43683 1085 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 SPOPO43791 374 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 FOXD2O60548 495 aaPredicted RBP5.81□□□□□ -1.48
PTPRC-209ENST00000442510 PRDM1O75626 825 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 CLTBP09497 229 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 ATP1A3P13637 1013 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 MUTP22033 750 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 NR4A1P22736 598 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 RPA1P27694 616 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 ACADSBP45954 432 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 HNRNPFP52597 415 aaKnown RBP5.81□□□□□ -1.48
PTPRC-209ENST00000442510 AP3B2Q13367 1082 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 TBRG1Q3YBR2 411 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 ZNF600Q6ZNG1 722 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 GALNT13Q8IUC8 556 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 MARCH10Q8NA82 808 aaPredicted RBP5.81□□□□□ -1.48
PTPRC-209ENST00000442510 TRPV3Q8NET8 790 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 CLHC1Q8NHS4 586 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 HTRA1Q92743 480 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 DNAJC7Q99615 494 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 PHF20Q9BVI0 1012 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 SENP6Q9GZR1 1112 aaPredicted RBP5.81□□□□□ -1.48
PTPRC-209ENST00000442510 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.81□□□□□ -1.48
PTPRC-209ENST00000442510 TOR3AQ9H497 397 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 FAM207AQ9NSI2 230 aaPredicted RBP5.81□□□□□ -1.48
PTPRC-209ENST00000442510 BMP2KQ9NSY1 1161 aaPredicted RBP5.81□□□□□ -1.48
PTPRC-209ENST00000442510 COQ3Q9NZJ6 369 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 ADAM30Q9UKF2 790 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 VAV3Q9UKW4 847 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.81□□□□□ -1.48
PTPRC-209ENST00000442510 YEATS2Q9ULM3 1422 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 PNMA8CA0A1B0GUJ8 204 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 ARHGEF33A8MVX0 844 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 YES1P07947 543 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 IL10P22301 178 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 RBL1P28749 1068 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 RRM2P31350 389 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 PSMC6P62333 389 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 ERVK-8P63133 956 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 ASIC1P78348 528 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 NR1H3Q13133 447 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 SLC39A6Q13433 755 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 OCLNQ16625 522 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 NEPROQ6NW34 567 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 NET1Q7Z628 596 aaPredicted RBP5.81□□□□□ -1.48
PTPRC-209ENST00000442510 PLEKHM2Q8IWE5 1019 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 METTL4Q8N3J2 472 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 TSPYL6Q8N831 410 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 LINS1Q8NG48 757 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 GDPD5Q8WTR4 605 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 CPT1BQ92523 772 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 FIG4Q92562 907 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 METTL2AQ96IZ6 378 aaKnown RBP5.81□□□□□ -1.48
PTPRC-209ENST00000442510 BBS2Q9BXC9 721 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 UBXN6Q9BZV1 441 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 PIGUQ9H490 435 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 NOX1Q9Y5S8 564 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 NCOA3Q9Y6Q9 1424 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 UMODL1Q5DID0 1318 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 GPR75-ASB3A0A0A6YYF3 556 aa5.81□□□□□ -1.48
PTPRC-209ENST00000442510 TRAV20A0A0B4J274 112 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms