RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 MYL6P60660 151 aa20.25■□□□□ 0.83
HMGB3P22-201ENST00000442010 FZD5Q13467 585 aa20.25■□□□□ 0.83
HMGB3P22-201ENST00000442010 DDR2Q16832 855 aa20.25■□□□□ 0.83
HMGB3P22-201ENST00000442010 ARHGAP15Q53QZ3 475 aa20.25■□□□□ 0.83
HMGB3P22-201ENST00000442010 TDRD10Q5VZ19 366 aaKnown RBP20.25■□□□□ 0.83
HMGB3P22-201ENST00000442010 GPIHBP1Q8IV16 184 aa20.25■□□□□ 0.83
HMGB3P22-201ENST00000442010 MYRFLQ96LU7 910 aa20.25■□□□□ 0.83
HMGB3P22-201ENST00000442010 SLC46A2Q9BY10 475 aa20.25■□□□□ 0.83
HMGB3P22-201ENST00000442010 VRTNQ9H8Y1 702 aa20.25■□□□□ 0.83
HMGB3P22-201ENST00000442010 OBP2AQ9NY56 170 aa20.25■□□□□ 0.83
HMGB3P22-201ENST00000442010 ZFHX2Q9C0A1 2572 aaPredicted RBP20.24■□□□□ 0.83
HMGB3P22-201ENST00000442010 HELZP42694 1942 aaKnown RBP20.24■□□□□ 0.83
HMGB3P22-201ENST00000442010 FAM170BA6NMN3 283 aa20.24■□□□□ 0.83
HMGB3P22-201ENST00000442010 CHADO15335 359 aa20.24■□□□□ 0.83
HMGB3P22-201ENST00000442010 PRAMEF12O95522 483 aa20.24■□□□□ 0.83
HMGB3P22-201ENST00000442010 CSH1P0DML2 217 aa20.24■□□□□ 0.83
HMGB3P22-201ENST00000442010 CSH2P0DML3 217 aa20.24■□□□□ 0.83
HMGB3P22-201ENST00000442010 TARSP26639 723 aaKnown RBP20.24■□□□□ 0.83
HMGB3P22-201ENST00000442010 ATICP31939 592 aa20.24■□□□□ 0.83
HMGB3P22-201ENST00000442010 MAGEA11P43364 429 aa20.24■□□□□ 0.83
HMGB3P22-201ENST00000442010 PSMC1P62191 440 aaKnown RBP20.24■□□□□ 0.83
HMGB3P22-201ENST00000442010 KCNB1Q14721 858 aa20.24■□□□□ 0.83
HMGB3P22-201ENST00000442010 TAF12Q16514 161 aa20.24■□□□□ 0.83
HMGB3P22-201ENST00000442010 NFIL3Q16649 462 aa20.24■□□□□ 0.83
HMGB3P22-201ENST00000442010 WDR72Q3MJ13 1102 aa20.24■□□□□ 0.83
HMGB3P22-201ENST00000442010 CLDN23Q96B33 292 aa20.24■□□□□ 0.83
HMGB3P22-201ENST00000442010 TRMT2BQ96GJ1 504 aaKnown RBP20.24■□□□□ 0.83
HMGB3P22-201ENST00000442010 MMS19Q96T76 1030 aa20.24■□□□□ 0.83
HMGB3P22-201ENST00000442010 FAM186AA6NE01 2351 aa20.24■□□□□ 0.83
HMGB3P22-201ENST00000442010 MYH10P35580 1976 aa20.23■□□□□ 0.83
HMGB3P22-201ENST00000442010 ZNF263O14978 683 aa20.23■□□□□ 0.83
HMGB3P22-201ENST00000442010 TADA3O75528 432 aa20.23■□□□□ 0.83
HMGB3P22-201ENST00000442010 VNN1O95497 513 aa20.23■□□□□ 0.83
HMGB3P22-201ENST00000442010 PDGFRBP09619 1106 aa20.23■□□□□ 0.83
HMGB3P22-201ENST00000442010 AP3M2P53677 418 aa20.23■□□□□ 0.83
HMGB3P22-201ENST00000442010 RPL10AP62906 217 aaKnown RBP20.23■□□□□ 0.83
HMGB3P22-201ENST00000442010 DLG4P78352 724 aa20.23■□□□□ 0.83
HMGB3P22-201ENST00000442010 NUCB2P80303 420 aa20.23■□□□□ 0.83
HMGB3P22-201ENST00000442010 UBXN2BQ14CS0 331 aa20.23■□□□□ 0.83
HMGB3P22-201ENST00000442010 ZNF852Q6ZMS4 543 aa20.23■□□□□ 0.83
HMGB3P22-201ENST00000442010 SPATA2LQ8IUW3 424 aaPredicted RBP20.23■□□□□ 0.83
HMGB3P22-201ENST00000442010 C1orf210Q8IVY1 113 aa20.23■□□□□ 0.83
HMGB3P22-201ENST00000442010 FMR1NBQ8N0W7 255 aaPredicted RBP20.23■□□□□ 0.83
HMGB3P22-201ENST00000442010 MYLPFQ96A32 169 aa20.23■□□□□ 0.83
HMGB3P22-201ENST00000442010 NELL2Q99435 816 aa20.23■□□□□ 0.83
HMGB3P22-201ENST00000442010 ZMYM5Q9UJ78 669 aa20.23■□□□□ 0.83
HMGB3P22-201ENST00000442010 SLC38A8A6NNN8 435 aa20.22■□□□□ 0.83
HMGB3P22-201ENST00000442010 SOBPA7XYQ1 873 aa20.22■□□□□ 0.83
HMGB3P22-201ENST00000442010 GNL1P36915 607 aaPredicted RBP20.22■□□□□ 0.83
HMGB3P22-201ENST00000442010 MLLT6P55198 1093 aaPredicted RBP20.22■□□□□ 0.83
HMGB3P22-201ENST00000442010 TRPC3Q13507 836 aa20.22■□□□□ 0.83
HMGB3P22-201ENST00000442010 MAPRE1Q15691 268 aaKnown RBP20.22■□□□□ 0.83
HMGB3P22-201ENST00000442010 C1orf220Q5T0J3 134 aa20.22■□□□□ 0.83
HMGB3P22-201ENST00000442010 C4orf50Q6ZRC1 276 aa20.22■□□□□ 0.83
HMGB3P22-201ENST00000442010 MAML2Q8IZL2 1156 aaPredicted RBP20.22■□□□□ 0.83
HMGB3P22-201ENST00000442010 CMTM8Q8IZV2 173 aa20.22■□□□□ 0.83
HMGB3P22-201ENST00000442010 GUF1Q8N442 669 aaKnown RBP20.22■□□□□ 0.83
HMGB3P22-201ENST00000442010 MYCBPAPQ8TBZ2 947 aa20.22■□□□□ 0.83
HMGB3P22-201ENST00000442010 TMC2Q8TDI7 906 aa20.22■□□□□ 0.83
HMGB3P22-201ENST00000442010 SYAP1Q96A49 352 aaPredicted RBP20.22■□□□□ 0.83
HMGB3P22-201ENST00000442010 PCED1BQ96HM7 432 aa20.22■□□□□ 0.83
HMGB3P22-201ENST00000442010 GCNAQ96QF7 691 aa20.22■□□□□ 0.83
HMGB3P22-201ENST00000442010 MAGEC2Q9UBF1 373 aaPredicted RBP20.22■□□□□ 0.83
HMGB3P22-201ENST00000442010 PTPRZ1P23471 2315 aaPredicted RBP20.21■□□□□ 0.83
HMGB3P22-201ENST00000442010 MAN2B1O00754 1011 aa20.21■□□□□ 0.83
HMGB3P22-201ENST00000442010 MAPK13O15264 365 aa20.21■□□□□ 0.83
HMGB3P22-201ENST00000442010 CALUO43852 315 aaPredicted RBP20.21■□□□□ 0.83
HMGB3P22-201ENST00000442010 DDX6P26196 483 aaKnown RBP eCLIP20.21■□□□□ 0.83
HMGB3P22-201ENST00000442010 TNNC1P63316 161 aa20.21■□□□□ 0.83
HMGB3P22-201ENST00000442010 ZACNQ401N2 412 aa20.21■□□□□ 0.83
HMGB3P22-201ENST00000442010 VSTM1Q6UX27 236 aa20.21■□□□□ 0.83
HMGB3P22-201ENST00000442010 ENGASEQ8NFI3 743 aa20.21■□□□□ 0.83
HMGB3P22-201ENST00000442010 CCDC47Q96A33 483 aaKnown RBP20.21■□□□□ 0.83
HMGB3P22-201ENST00000442010 BCO2Q9BYV7 579 aa20.21■□□□□ 0.83
HMGB3P22-201ENST00000442010 SMG9Q9H0W8 520 aaKnown RBP20.21■□□□□ 0.83
HMGB3P22-201ENST00000442010 UXTQ9UBK9 157 aaPredicted RBP20.21■□□□□ 0.83
HMGB3P22-201ENST00000442010 MAGED2Q9UNF1 606 aaPredicted RBP20.21■□□□□ 0.83
HMGB3P22-201ENST00000442010 MAPK8IP1Q9UQF2 711 aa20.21■□□□□ 0.83
HMGB3P22-201ENST00000442010 PHACTR2O75167 634 aa20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 KIF20AO95235 890 aa20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 BDNFP23560 247 aa20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 MAGEA9P43362 315 aa20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 RPS9P46781 194 aaKnown RBP20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 MCCD1P59942 119 aaPredicted RBP20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 BIRC3Q13489 604 aa20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 NCOA4Q13772 614 aa20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 ZCWPW2Q504Y3 356 aa20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 ARHGAP29Q52LW3 1261 aa20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 TXNDC8Q6A555 127 aa20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 FRMD5Q7Z6J6 570 aa20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 MON1AQ86VX9 555 aa20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 YAF2Q8IY57 180 aa20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 MAB21L3Q8N8X9 362 aa20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 OR6B3Q8NGW1 331 aa20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 BPIFB1Q8TDL5 484 aa20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 SPATA17Q96L03 361 aa20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 CEP295NLQ96MC4 621 aa20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 SNX25Q9H3E2 840 aa20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 DPEP3Q9H4B8 488 aa20.2■□□□□ 0.82
HMGB3P22-201ENST00000442010 NXF1Q9UBU9 619 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms