RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 SHKBP1Q8TBC3 707 aa21.28■■□□□ 1
SHOX2-203ENST00000441443 FAM81BQ96LP2 452 aa21.28■■□□□ 1
SHOX2-203ENST00000441443 CENPKQ9BS16 269 aa21.28■■□□□ 1
SHOX2-203ENST00000441443 SPDYE2BA6NHP3 402 aa21.27■■□□□ 1
SHOX2-203ENST00000441443 TM9SF1O15321 606 aa21.27■■□□□ 1
SHOX2-203ENST00000441443 OPHN1O60890 802 aa21.27■■□□□ 1
SHOX2-203ENST00000441443 SPDYE6P0CI01 402 aa21.27■■□□□ 1
SHOX2-203ENST00000441443 RAP1GDS1P52306 607 aa21.27■■□□□ 1
SHOX2-203ENST00000441443 PTP4A2Q12974 167 aa21.27■■□□□ 1
SHOX2-203ENST00000441443 FNBP1LQ5T0N5 605 aa21.27■■□□□ 1
SHOX2-203ENST00000441443 DTNBP1Q96EV8 351 aa21.27■■□□□ 1
SHOX2-203ENST00000441443 MRIQ9BWK5 157 aa21.27■■□□□ 1
SHOX2-203ENST00000441443 ZNF70Q9UC06 446 aaPredicted RBP21.27■■□□□ 1
SHOX2-203ENST00000441443 DSG3P32926 999 aa21.27■■□□□ 1
SHOX2-203ENST00000441443 PRKD1Q15139 912 aaPredicted RBP21.27■■□□□ 1
SHOX2-203ENST00000441443 ANKRD22Q5VYY1 191 aa21.27■■□□□ 1
SHOX2-203ENST00000441443 ADGRD1Q6QNK2 874 aa21.27■■□□□ 1
SHOX2-203ENST00000441443 RAPH1Q70E73 1250 aa21.27■■□□□ 1
SHOX2-203ENST00000441443 MZB1Q8WU39 189 aa21.27■■□□□ 1
SHOX2-203ENST00000441443 ZWILCHQ9H900 591 aa21.27■■□□□ 1
SHOX2-203ENST00000441443 SSU72Q9NP77 194 aaKnown RBP21.27■■□□□ 1
SHOX2-203ENST00000441443 GPC3P51654 580 aa21.26■□□□□ 0.99
SHOX2-203ENST00000441443 PEX3P56589 373 aa21.26■□□□□ 0.99
SHOX2-203ENST00000441443 DGKZQ13574 1117 aa21.26■□□□□ 0.99
SHOX2-203ENST00000441443 C1orf146Q5VVC0 180 aa21.26■□□□□ 0.99
SHOX2-203ENST00000441443 RHPN2Q8IUC4 686 aa21.26■□□□□ 0.99
SHOX2-203ENST00000441443 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.26■□□□□ 0.99
SHOX2-203ENST00000441443 PREBQ9HCU5 417 aa21.26■□□□□ 0.99
SHOX2-203ENST00000441443 TLR3O15455 904 aaKnown RBP21.26■□□□□ 0.99
SHOX2-203ENST00000441443 POLR2MP0CAP2 368 aa21.26■□□□□ 0.99
SHOX2-203ENST00000441443 PABPC1LQ4VXU2 614 aaKnown RBP21.26■□□□□ 0.99
SHOX2-203ENST00000441443 NCSTNQ92542 709 aa21.26■□□□□ 0.99
SHOX2-203ENST00000441443 KIFC3Q9BVG8 833 aa21.26■□□□□ 0.99
SHOX2-203ENST00000441443 ETNK2Q9NVF9 386 aa21.26■□□□□ 0.99
SHOX2-203ENST00000441443 SAE1Q9UBE0 346 aaPredicted RBP21.26■□□□□ 0.99
SHOX2-203ENST00000441443 PPARGC1AQ9UBK2 798 aaKnown RBP21.26■□□□□ 0.99
SHOX2-203ENST00000441443 SLC7A8Q9UHI5 535 aa21.26■□□□□ 0.99
SHOX2-203ENST00000441443 SH3BP1Q9Y3L3 701 aa21.26■□□□□ 0.99
SHOX2-203ENST00000441443 SCNN1BP51168 640 aa21.26■□□□□ 0.99
SHOX2-203ENST00000441443 MARK2Q7KZI7 788 aaKnown RBP21.26■□□□□ 0.99
SHOX2-203ENST00000441443 TMPRSS6Q8IU80 811 aa21.26■□□□□ 0.99
SHOX2-203ENST00000441443 ULK2Q8IYT8 1036 aa21.26■□□□□ 0.99
SHOX2-203ENST00000441443 TMEM8AQ9HCN3 771 aa21.26■□□□□ 0.99
SHOX2-203ENST00000441443 CIB2O75838 187 aa21.25■□□□□ 0.99
SHOX2-203ENST00000441443 MT-ND3P03897 115 aa21.25■□□□□ 0.99
SHOX2-203ENST00000441443 AP2B1P63010 937 aa21.25■□□□□ 0.99
SHOX2-203ENST00000441443 MAMLD1Q13495 774 aa21.25■□□□□ 0.99
SHOX2-203ENST00000441443 MTMR2Q13614 643 aa21.25■□□□□ 0.99
SHOX2-203ENST00000441443 SV2AQ7L0J3 742 aa21.25■□□□□ 0.99
SHOX2-203ENST00000441443 C12orf56Q8IXR9 622 aa21.25■□□□□ 0.99
SHOX2-203ENST00000441443 FBXO36Q8NEA4 188 aa21.25■□□□□ 0.99
SHOX2-203ENST00000441443 SERAC1Q96JX3 654 aa21.25■□□□□ 0.99
SHOX2-203ENST00000441443 WDR83Q9BRX9 315 aaKnown RBP21.25■□□□□ 0.99
SHOX2-203ENST00000441443 NRXN2Q9P2S2 1712 aa21.25■□□□□ 0.99
SHOX2-203ENST00000441443 MAGEC1O60732 1142 aa21.25■□□□□ 0.99
SHOX2-203ENST00000441443 KRT1P04264 644 aa21.25■□□□□ 0.99
SHOX2-203ENST00000441443 CRABP2P29373 138 aa21.25■□□□□ 0.99
SHOX2-203ENST00000441443 LSAMPQ13449 338 aa21.25■□□□□ 0.99
SHOX2-203ENST00000441443 MON1BQ7L1V2 547 aa21.25■□□□□ 0.99
SHOX2-203ENST00000441443 DCAKDQ8WVC6 231 aa21.25■□□□□ 0.99
SHOX2-203ENST00000441443 GINM1Q9NU53 330 aa21.25■□□□□ 0.99
SHOX2-203ENST00000441443 ATXN10Q9UBB4 475 aa21.25■□□□□ 0.99
SHOX2-203ENST00000441443 F8W8V4 182 aa21.24■□□□□ 0.99
SHOX2-203ENST00000441443 KITP10721 976 aa21.24■□□□□ 0.99
SHOX2-203ENST00000441443 CEP55Q53EZ4 464 aa21.24■□□□□ 0.99
SHOX2-203ENST00000441443 RSBN1LQ6PCB5 846 aaPredicted RBP21.24■□□□□ 0.99
SHOX2-203ENST00000441443 MYLK4Q86YV6 388 aaPredicted RBP21.24■□□□□ 0.99
SHOX2-203ENST00000441443 SLITRK1Q96PX8 696 aa21.24■□□□□ 0.99
SHOX2-203ENST00000441443 ZNF395Q9H8N7 513 aaPredicted RBP21.24■□□□□ 0.99
SHOX2-203ENST00000441443 STK32BQ9NY57 414 aa21.24■□□□□ 0.99
SHOX2-203ENST00000441443 DCAF8L1A6NGE4 600 aa21.24■□□□□ 0.99
SHOX2-203ENST00000441443 HARSP12081 509 aaKnown RBP21.24■□□□□ 0.99
SHOX2-203ENST00000441443 PHBP35232 272 aa21.24■□□□□ 0.99
SHOX2-203ENST00000441443 GRIA2P42262 883 aa21.24■□□□□ 0.99
SHOX2-203ENST00000441443 C6orf163Q5TEZ5 329 aa21.24■□□□□ 0.99
SHOX2-203ENST00000441443 LMBRD2Q68DH5 695 aaPredicted RBP21.24■□□□□ 0.99
SHOX2-203ENST00000441443 NET1Q7Z628 596 aaPredicted RBP21.24■□□□□ 0.99
SHOX2-203ENST00000441443 TRIM74Q86UV6 250 aa21.24■□□□□ 0.99
SHOX2-203ENST00000441443 TRIM73Q86UV7 250 aa21.24■□□□□ 0.99
SHOX2-203ENST00000441443 ST13P4Q8IZP2 240 aaPredicted RBP21.24■□□□□ 0.99
SHOX2-203ENST00000441443 ATP11CQ8NB49 1132 aa21.24■□□□□ 0.99
SHOX2-203ENST00000441443 AGBL1Q96MI9 1066 aa21.24■□□□□ 0.99
SHOX2-203ENST00000441443 HAPLN3Q96S86 360 aa21.24■□□□□ 0.99
SHOX2-203ENST00000441443 MARCOQ9UEW3 520 aaPredicted RBP21.24■□□□□ 0.99
SHOX2-203ENST00000441443 PHF24Q9UPV7 400 aa21.24■□□□□ 0.99
SHOX2-203ENST00000441443 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.23■□□□□ 0.99
SHOX2-203ENST00000441443 OR6B1O95007 311 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 ACTR3P61158 418 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 RPL7AP62424 266 aaKnown RBP21.23■□□□□ 0.99
SHOX2-203ENST00000441443 ALCAMQ13740 583 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 BBS9Q3SYG4 887 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 FAM182AQ5T1J6 154 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 TXNRD3NBQ6F5E7 133 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 PALM2Q8IXS6 379 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 PPP2R3CQ969Q6 453 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 NMD3Q96D46 503 aaKnown RBP21.23■□□□□ 0.99
SHOX2-203ENST00000441443 MECRQ9BV79 373 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 ACSS3Q9H6R3 686 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 GALNT8Q9NY28 637 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 PPP1R1BQ9UD71 204 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms