RNA–Protein interactions for RNA: ENST00000441439.6

LMO3-208, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-208ENST00000441439 TGFBRAP1Q8WUH2 860 aa8.24□□□□□ -1.09
LMO3-208ENST00000441439 AGBL1Q96MI9 1066 aa8.24□□□□□ -1.09
LMO3-208ENST00000441439 IQCGQ9H095 443 aaKnown RBP8.24□□□□□ -1.09
LMO3-208ENST00000441439 DHX33Q9H6R0 707 aaKnown RBP8.24□□□□□ -1.09
LMO3-208ENST00000441439 SF3B1O75533 1304 aaKnown RBP eCLIP8.24□□□□□ -1.09
LMO3-208ENST00000441439 EMSYQ7Z589 1322 aa8.24□□□□□ -1.09
LMO3-208ENST00000441439 ZNF701M0R085 212 aaPredicted RBP8.24□□□□□ -1.09
LMO3-208ENST00000441439 HGSO14964 777 aaPredicted RBP8.24□□□□□ -1.09
LMO3-208ENST00000441439 TRIM49P0CI25 452 aa8.24□□□□□ -1.09
LMO3-208ENST00000441439 TRIM49CP0CI26 452 aa8.24□□□□□ -1.09
LMO3-208ENST00000441439 RALAP11233 206 aa8.24□□□□□ -1.09
LMO3-208ENST00000441439 HMGB2P26583 209 aaKnown RBP8.24□□□□□ -1.09
LMO3-208ENST00000441439 PIK3CAP42336 1068 aa8.24□□□□□ -1.09
LMO3-208ENST00000441439 PSMD7P51665 324 aa8.24□□□□□ -1.09
LMO3-208ENST00000441439 ADARP55265 1226 aaKnown RBP8.24□□□□□ -1.09
LMO3-208ENST00000441439 PPP3CAQ08209 521 aa8.24□□□□□ -1.09
LMO3-208ENST00000441439 C3orf67Q6ZVT6 689 aa8.24□□□□□ -1.09
LMO3-208ENST00000441439 RASSF3Q86WH2 238 aa8.24□□□□□ -1.09
LMO3-208ENST00000441439 RCOR2Q8IZ40 523 aa8.24□□□□□ -1.09
LMO3-208ENST00000441439 HAUS1Q96CS2 278 aa8.24□□□□□ -1.09
LMO3-208ENST00000441439 MTBPQ96DY7 904 aa8.24□□□□□ -1.09
LMO3-208ENST00000441439 SLC2A11Q9BYW1 496 aa8.24□□□□□ -1.09
LMO3-208ENST00000441439 FBXO6Q9NRD1 293 aaPredicted RBP8.24□□□□□ -1.09
LMO3-208ENST00000441439 SEPT11Q9NVA2 429 aaKnown RBP8.24□□□□□ -1.09
LMO3-208ENST00000441439 SDR42E2A6NKP2 422 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 MYL2P10916 166 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 ALOX15P16050 662 aaPredicted RBP8.23□□□□□ -1.09
LMO3-208ENST00000441439 GCNT1Q02742 428 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 CCNIQ14094 377 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 DUS1LQ6P1R4 473 aaKnown RBP8.23□□□□□ -1.09
LMO3-208ENST00000441439 TRIM72Q6ZMU5 477 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 MON1BQ7L1V2 547 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 KBTBD6Q86V97 674 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 ERI1Q8IV48 349 aaKnown RBP8.23□□□□□ -1.09
LMO3-208ENST00000441439 RNF168Q8IYW5 571 aaPredicted RBP8.23□□□□□ -1.09
LMO3-208ENST00000441439 CATSPER1Q8NEC5 780 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 BTBD6Q96KE9 485 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 PAFAH2Q99487 392 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 ZNF341Q9BYN7 854 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 VPS28Q9UK41 221 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.23□□□□□ -1.09
LMO3-208ENST00000441439 MYPNQ86TC9 1320 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.23□□□□□ -1.09
LMO3-208ENST00000441439 C15orf38-AP3S2A0A0A6YYH1 394 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 A0A0B4J269 797 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 A0A0G2JND7 137 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 IQANK1A0A1B0GTG1 560 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 H3BNX3 289 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 PFDN1O60925 122 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 PORP16435 677 aaPredicted RBP8.23□□□□□ -1.09
LMO3-208ENST00000441439 ZFXP17010 805 aaPredicted RBP8.23□□□□□ -1.09
LMO3-208ENST00000441439 NMT1P30419 496 aaKnown RBP8.23□□□□□ -1.09
LMO3-208ENST00000441439 HSPA13P48723 471 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 RPS8P62241 208 aaKnown RBP8.23□□□□□ -1.09
LMO3-208ENST00000441439 PLOD1Q02809 727 aaPredicted RBP8.23□□□□□ -1.09
LMO3-208ENST00000441439 TUBB3Q13509 450 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 COG2Q14746 738 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 KRT39Q6A163 491 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 FBXL19Q6PCT2 694 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 ARCQ7LC44 396 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 ARPINQ7Z6K5 226 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 NAT8LQ8N9F0 302 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 PLEKHO2Q8TD55 490 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 DCAF4Q8WV16 495 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 SLC44A1Q8WWI5 657 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 CELF1Q92879 486 aaKnown RBP8.23□□□□□ -1.09
LMO3-208ENST00000441439 Q9H521 79 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 FAM96AQ9H5X1 160 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 VAT1LQ9HCJ6 419 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 SLC17A7Q9P2U7 560 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 SAP30BPQ9UHR5 308 aaKnown RBP8.23□□□□□ -1.09
LMO3-208ENST00000441439 ANAPC7Q9UJX3 599 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 IGLV3-22A0A075B6J6 115 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 GSTTP1A0A1W2PQM5 241 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 MSH4O15457 936 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 ATMINO43313 823 aaPredicted RBP8.23□□□□□ -1.09
LMO3-208ENST00000441439 TNFAIP8O95379 198 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 C1QAP02745 245 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 GLRA2P23416 452 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 POLD1P28340 1107 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 VCPP55072 806 aaKnown RBP8.23□□□□□ -1.09
LMO3-208ENST00000441439 FKBP1AP62942 108 aaKnown RBP8.23□□□□□ -1.09
LMO3-208ENST00000441439 PDIA2Q13087 525 aaKnown RBP8.23□□□□□ -1.09
LMO3-208ENST00000441439 CBX3Q13185 183 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 BTG3Q14201 252 aaPredicted RBP8.23□□□□□ -1.09
LMO3-208ENST00000441439 TAZQ16635 292 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 ERFEQ4G0M1 354 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 RABGAP1LQ5R372 815 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 SYCP2LQ5T4T6 812 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 ATG16L1Q676U5 607 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 PLA2G4FQ68DD2 849 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 CC2D2BQ6DHV5 1058 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 PLEKHA7Q6IQ23 1121 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 CYP4F22Q6NT55 531 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 TMC7Q7Z402 723 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 NLRX1Q86UT6 975 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 SLC47A2Q86VL8 602 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 RTKN2Q8IZC4 609 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 METTL25Q8N6Q8 603 aa8.23□□□□□ -1.09
LMO3-208ENST00000441439 TMC2Q8TDI7 906 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms