RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 C4orf32Q8N8J7 132 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 CMASQ8NFW8 434 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-206ENST00000441089 GPT2Q8TD30 523 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 TBCKQ8TEA7 893 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 SLC22A17Q8WUG5 538 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 CRYGNQ8WXF5 182 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 CUL5Q93034 780 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 LOXL4Q96JB6 756 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 ZNF396Q96N95 335 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-206ENST00000441089 RMDN3Q96TC7 470 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 ANO3Q9BYT9 981 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 TMEM60Q9H2L4 133 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 CWH43Q9H720 699 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 AGO3Q9H9G7 860 aaKnown RBP5.31□□□□□ -1.56
PTPN4-206ENST00000441089 ATP6V0A4Q9HBG4 840 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 BRMS1Q9HCU9 246 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 WDR6Q9NNW5 1121 aaKnown RBP5.31□□□□□ -1.56
PTPN4-206ENST00000441089 KRT82Q9NSB4 513 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 PADI3Q9ULW8 664 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 MRPL11Q9Y3B7 192 aaKnown RBP5.31□□□□□ -1.56
PTPN4-206ENST00000441089 ATP6V1DQ9Y5K8 247 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 ZFP37Q9Y6Q3 630 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-206ENST00000441089 ITPR2Q14571 2701 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 IGSF9BQ9UPX0 1349 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 CCDC194A0A1B0GVG4 234 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 DENND3A2RUS2 1198 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 ANHXE9PGG2 379 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 GCOM1H8Y6P7 765 aaPredicted RBP5.3□□□□□ -1.56
PTPN4-206ENST00000441089 SPTLC2O15270 562 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 ARHGAP6O43182 974 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 SLC37A4O43826 429 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 TDP2O95551 362 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 CFBP00751 764 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 POLR2MP0CAP2 368 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 TDGF1P13385 188 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 PLA2G2AP14555 144 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 IBSPP21815 317 aaPredicted RBP5.3□□□□□ -1.56
PTPN4-206ENST00000441089 MARCKSP29966 332 aaPredicted RBP5.3□□□□□ -1.56
PTPN4-206ENST00000441089 SREBF1P36956 1147 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 TRAPPC10P48553 1259 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 ALDH7A1P49419 539 aaKnown RBP5.3□□□□□ -1.56
PTPN4-206ENST00000441089 MTAPQ13126 283 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 HTR4Q13639 388 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 SLC39A14Q15043 492 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 SF3A2Q15428 464 aaKnown RBP5.3□□□□□ -1.56
PTPN4-206ENST00000441089 ENOX2Q16206 610 aaKnown RBP5.3□□□□□ -1.56
PTPN4-206ENST00000441089 IL17AQ16552 155 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 FAM102BQ5T8I3 360 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 ATL3Q6DD88 541 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 ZNF852Q6ZMS4 543 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 SLC24A5Q71RS6 500 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 CEP68Q76N32 757 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 NEK8Q86SG6 692 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 MCF2L2Q86YR7 1114 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 IL31RAQ8NI17 732 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 BICD2Q8TD16 824 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 SYTL5Q8TDW5 730 aaPredicted RBP5.3□□□□□ -1.56
PTPN4-206ENST00000441089 FBF1Q8TES7 1133 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 DNAJB3Q8WWF6 145 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 TMEM169Q96HH4 297 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 SPATA32Q96LK8 384 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 C20orf173Q96LM9 149 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 CLIC6Q96NY7 704 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 SCAND2PQ9GZW5 306 aaPredicted RBP5.3□□□□□ -1.56
PTPN4-206ENST00000441089 TMEM117Q9H0C3 514 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 GOLPH3LQ9H4A5 285 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 ELAC1Q9H777 363 aaKnown RBP5.3□□□□□ -1.56
PTPN4-206ENST00000441089 C19orf73Q9NVV2 129 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 TMEM161AQ9NX61 479 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 STK39Q9UEW8 545 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 GPN3Q9UHW5 284 aaPredicted RBP5.3□□□□□ -1.56
PTPN4-206ENST00000441089 TUBE1Q9UJT0 475 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 FBXO2Q9UK22 296 aaPredicted RBP5.3□□□□□ -1.56
PTPN4-206ENST00000441089 CFAP45Q9UL16 551 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 PCDHA7Q9UN72 937 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 RAI2Q9Y5P3 530 aa5.3□□□□□ -1.56
PTPN4-206ENST00000441089 SETD2Q9BYW2 2564 aaPredicted RBP5.3□□□□□ -1.56
PTPN4-206ENST00000441089 USP9YO00507 2555 aaPredicted RBP5.29□□□□□ -1.56
PTPN4-206ENST00000441089 FRMPD4Q14CM0 1322 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 CAPN8A6NHC0 703 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 J3QKU1 62 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 GSTP1P09211 210 aaKnown RBP5.29□□□□□ -1.56
PTPN4-206ENST00000441089 INHBBP09529 407 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 CTSAP10619 480 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 CSRP1P21291 193 aaKnown RBP5.29□□□□□ -1.56
PTPN4-206ENST00000441089 UBA1P22314 1058 aaKnown RBP5.29□□□□□ -1.56
PTPN4-206ENST00000441089 CIITAP33076 1130 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 MCM7P33993 719 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 RDXP35241 583 aaKnown RBP5.29□□□□□ -1.56
PTPN4-206ENST00000441089 GPC5P78333 572 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 ATP2C1P98194 919 aaPredicted RBP5.29□□□□□ -1.56
PTPN4-206ENST00000441089 PPP2R3AQ06190 1150 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 ADCY1Q08828 1119 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 KCNA1Q09470 495 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 TRAF1Q13077 416 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 PPFIA1Q13136 1202 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 STK38Q15208 465 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 CCDC6Q16204 474 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 SHC4Q6S5L8 630 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 USP49Q70CQ1 688 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms