RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 KLHL5Q96PQ7 755 aa15.48■□□□□ 0.07
TNFRSF1A-204ENST00000440083 PACSIN1Q9BY11 444 aa15.48■□□□□ 0.07
TNFRSF1A-204ENST00000440083 NENFQ9UMX5 172 aa15.48■□□□□ 0.07
TNFRSF1A-204ENST00000440083 AGAP1Q9UPQ3 857 aa15.48■□□□□ 0.07
TNFRSF1A-204ENST00000440083 TIMM13Q9Y5L4 95 aaPredicted RBP15.48■□□□□ 0.07
TNFRSF1A-204ENST00000440083 SAR1BQ9Y6B6 198 aa15.48■□□□□ 0.07
TNFRSF1A-204ENST00000440083 PRUNE2Q8WUY3 3088 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 TMCO5BA8MYB1 307 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 ENC1O14682 589 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 TEX28O15482 410 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 CYP26A1O43174 497 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 TBX10O75333 385 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 VNN1O95497 513 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 KRT19P08727 400 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 AARSP49588 968 aaKnown RBP eCLIP15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 PLXNA3P51805 1871 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 BPIFB4P59827 614 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 LILRA4P59901 499 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 TFF2Q03403 129 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 ELAVL2Q12926 359 aaKnown RBP15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 CUL2Q13617 745 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 PSMD5Q16401 504 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 RSPO2Q6UXX9 243 aaPredicted RBP15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 TRAPPC11Q7Z392 1133 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 EFHBQ8N7U6 833 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 SLC30A5Q8TAD4 765 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 EPS8L1Q8TE68 723 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 SLC20A1Q8WUM9 679 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 UBXN4Q92575 508 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 GOLGA1Q92805 767 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 ELMO3Q96BJ8 720 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 CLDND1Q9NY35 253 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 TSC2P49815 1807 aa15.47■□□□□ 0.07
TNFRSF1A-204ENST00000440083 NCANO14594 1321 aa15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 A0A0A6YYK5 440 aaPredicted RBP15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 EFCAB8A8MWE9 144 aa15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 TRAPPC3O43617 180 aa15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 TADA3O75528 432 aa15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 TMEM253P0C7T8 217 aa15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 EPCAMP16422 314 aa15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 AMPD2Q01433 879 aa15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 COL19A1Q14993 1142 aa15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 CLUL1Q15846 466 aa15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 VARS2Q5ST30 1063 aaKnown RBP15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 TAF3Q5VWG9 929 aa15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 PAPD7Q5XG87 772 aaKnown RBP15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 DSTYKQ6XUX3 929 aa15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 PIK3R5Q8WYR1 880 aa15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 PPP2R3CQ969Q6 453 aa15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 SENP8Q96LD8 212 aa15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 SYT11Q9BT88 431 aa15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 UBE2ZQ9H832 354 aaPredicted RBP15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 RXFP1Q9HBX9 757 aa15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 STK39Q9UEW8 545 aa15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 ITGA11Q9UKX5 1188 aa15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 BARX2Q9UMQ3 279 aaPredicted RBP15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 PCDHB8Q9UN66 801 aa15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 HYOU1Q9Y4L1 999 aa15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 PCDHB4Q9Y5E5 795 aa15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 IRAK3Q9Y616 596 aa15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 V9GYY5 206 aaPredicted RBP15.46■□□□□ 0.07
TNFRSF1A-204ENST00000440083 CTAGE15A4D2H0 777 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 H3BQ06 376 aaPredicted RBP15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 M0QZQ0 153 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 PALMO75781 387 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 CTAGE8P0CG41 777 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 CYP11B1P15538 503 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 TCP1P17987 556 aaKnown RBP15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 KCNA5P22460 613 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 KLRC2P26717 231 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 LTBRP36941 435 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 TAF6P49848 677 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 GALCP54803 685 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 YWHAEP62258 255 aaKnown RBP15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 RBP5P82980 135 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 CDR2Q01850 454 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 ADAM15Q13444 863 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 CTC1Q2NKJ3 1217 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 ZNF699Q32M78 642 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 TEX35Q5T0J7 233 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 SPOPLQ6IQ16 392 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 NOP9Q86U38 636 aaKnown RBP15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 CTAGE6Q86UF2 777 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 CTAGE4Q8IX94 777 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 FEZF2Q8TBJ5 459 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 SLC22A17Q8WUG5 538 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 TSC1Q92574 1164 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 PABPC5Q96DU9 382 aaKnown RBP15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 CLSTN3Q9BQT9 956 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 EMILIN2Q9BXX0 1053 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 NIF3L1Q9GZT8 377 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 PDCL3Q9H2J4 239 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 CLEC1BQ9P126 229 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 NOCTQ9UK39 431 aaKnown RBP15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 HCFC2Q9Y5Z7 792 aa15.45■□□□□ 0.06
TNFRSF1A-204ENST00000440083 ANKRD62A6NC57 917 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 CYB561D2O14569 222 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 SYN3O14994 580 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms