RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 DAGLBQ8NCG7 672 aa12.07□□□□□ -0.48
CCBE1-202ENST00000439986 BEST2Q8NFU1 509 aa12.07□□□□□ -0.48
CCBE1-202ENST00000439986 MTMR9Q96QG7 549 aa12.07□□□□□ -0.48
CCBE1-202ENST00000439986 MTMR4Q9NYA4 1195 aa12.07□□□□□ -0.48
CCBE1-202ENST00000439986 FAM153BP0C7A2 387 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 ARF4P18085 180 aaPredicted RBP12.06□□□□□ -0.48
CCBE1-202ENST00000439986 MAPK6Q16659 721 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 UGP2Q16851 508 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 FAM153CQ494X1 144 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 RC3H1Q5TC82 1133 aaKnown RBP12.06□□□□□ -0.48
CCBE1-202ENST00000439986 SMIM5Q71RC9 77 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 HDDC2Q7Z4H3 204 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 FAM153AQ9UHL3 310 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 MAD2L2Q9UI95 211 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 ARHGAP10A1A4S6 786 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 ITIH2P19823 946 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 SPIRE1Q08AE8 756 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 ZBTB46Q86UZ6 589 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 INPP5DQ92835 1189 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 EPAS1Q99814 870 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 TLR10Q9BXR5 811 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.06□□□□□ -0.48
CCBE1-202ENST00000439986 TNS3Q68CZ2 1445 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 HSMCR30P0CW71 290 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 PHKA2P46019 1235 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 TMEM62Q0P6H9 643 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 COX10Q12887 443 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 FAM117BQ6P1L5 589 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 TSEN2Q8NCE0 465 aaKnown RBP12.06□□□□□ -0.48
CCBE1-202ENST00000439986 SCG3Q8WXD2 468 aaKnown RBP12.06□□□□□ -0.48
CCBE1-202ENST00000439986 LXNQ9BS40 222 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 SCAF8Q9UPN6 1271 aaKnown RBP12.06□□□□□ -0.48
CCBE1-202ENST00000439986 ITSN1Q15811 1721 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 PDE2AO00408 941 aaPredicted RBP12.06□□□□□ -0.48
CCBE1-202ENST00000439986 COMTP21964 271 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 HDAC4P56524 1084 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 ROR1Q01973 937 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 RCSD1Q6JBY9 416 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 SH3RF1Q7Z6J0 888 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 RBM15Q96T37 977 aaKnown RBP eCLIP12.06□□□□□ -0.48
CCBE1-202ENST00000439986 RHOBTB2Q9BYZ6 727 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 CDC40O60508 579 aaKnown RBP eCLIP12.06□□□□□ -0.48
CCBE1-202ENST00000439986 JAK3P52333 1124 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 ZNF543Q08ER8 600 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 MEI1Q5TIA1 1274 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 AGGF1Q8N302 714 aaeCLIP12.06□□□□□ -0.48
CCBE1-202ENST00000439986 TTLL6Q8N841 843 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 OR6P1Q8NGX9 317 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 ROPN1BQ9BZX4 212 aaPredicted RBP12.06□□□□□ -0.48
CCBE1-202ENST00000439986 ROPN1Q9HAT0 212 aaPredicted RBP12.06□□□□□ -0.48
CCBE1-202ENST00000439986 PKD2L2Q9NZM6 624 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 SENP1Q9P0U3 644 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 PNMA3Q9UL41 463 aa12.06□□□□□ -0.48
CCBE1-202ENST00000439986 SLC37A4O43826 429 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 GPR139Q6DWJ6 353 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 ADCK1Q86TW2 530 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 YAF2Q8IY57 180 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 PIGKQ92643 395 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 SH2D3AQ9BRG2 576 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 COA1Q9GZY4 146 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 FARSBQ9NSD9 589 aaKnown RBP12.05□□□□□ -0.48
CCBE1-202ENST00000439986 F5H6K3 240 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 FESP07332 822 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 ALDH18A1P54886 795 aaKnown RBP12.05□□□□□ -0.48
CCBE1-202ENST00000439986 KLRC3Q07444 240 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 MEA1Q16626 185 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 ANKRD13BQ86YJ7 626 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 TMEM139Q8IV31 216 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 C4orf33Q8N1A6 199 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 KIF12Q96FN5 646 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 ACAP3Q96P50 834 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 BARD1Q99728 777 aaKnown RBP12.05□□□□□ -0.48
CCBE1-202ENST00000439986 POLG2Q9UHN1 485 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 ZNF335Q9H4Z2 1342 aaPredicted RBP12.05□□□□□ -0.48
CCBE1-202ENST00000439986 CLTCQ00610 1675 aaKnown RBP12.05□□□□□ -0.48
CCBE1-202ENST00000439986 TCRBV5S4A2TA0A5A2 114 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 F8W8V4 182 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 PARNO95453 639 aaKnown RBP12.05□□□□□ -0.48
CCBE1-202ENST00000439986 IFNA8P32881 189 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 NNMTP40261 264 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 OTUD4Q01804 1114 aaKnown RBP12.05□□□□□ -0.48
CCBE1-202ENST00000439986 PABPC1LQ4VXU2 614 aaKnown RBP12.05□□□□□ -0.48
CCBE1-202ENST00000439986 BZW1Q7L1Q6 419 aaKnown RBP12.05□□□□□ -0.48
CCBE1-202ENST00000439986 SLC30A5Q8TAD4 765 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 ADNPQ9H2P0 1102 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 MTRRQ9UBK8 725 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 DDX20Q9UHI6 824 aaKnown RBP12.05□□□□□ -0.48
CCBE1-202ENST00000439986 CDV3Q9UKY7 258 aaKnown RBP12.05□□□□□ -0.48
CCBE1-202ENST00000439986 PXDNQ92626 1479 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 FAM47DPA6NHR8 397 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 NPIPA7E9PJI5 369 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 SEMA3DO95025 777 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 NPIPA8P0DM63 369 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 PDHBP11177 359 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 PPP3CCP48454 512 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 MAPK7Q13164 816 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 FAM102AQ5T9C2 384 aaPredicted RBP12.05□□□□□ -0.48
CCBE1-202ENST00000439986 HEATR6Q6AI08 1181 aaKnown RBP12.05□□□□□ -0.48
CCBE1-202ENST00000439986 ADCK2Q7Z695 626 aa12.05□□□□□ -0.48
CCBE1-202ENST00000439986 LONP2Q86WA8 852 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms