RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 LYNP07948 512 aa9.48□□□□□ -0.89
COPB1-202ENST00000439561 ANPEPP15144 967 aa9.48□□□□□ -0.89
COPB1-202ENST00000439561 GTF2H1P32780 548 aa9.48□□□□□ -0.89
COPB1-202ENST00000439561 VCPP55072 806 aaKnown RBP9.48□□□□□ -0.89
COPB1-202ENST00000439561 AP1B1Q10567 949 aa9.48□□□□□ -0.89
COPB1-202ENST00000439561 PSMD6Q15008 389 aa9.48□□□□□ -0.89
COPB1-202ENST00000439561 KBTBD12Q3ZCT8 623 aa9.48□□□□□ -0.89
COPB1-202ENST00000439561 PPIL6Q8IXY8 311 aa9.48□□□□□ -0.89
COPB1-202ENST00000439561 CCDC33Q8N5R6 958 aa9.48□□□□□ -0.89
COPB1-202ENST00000439561 DEPTORQ8TB45 409 aa9.48□□□□□ -0.89
COPB1-202ENST00000439561 E2F7Q96AV8 911 aa9.48□□□□□ -0.89
COPB1-202ENST00000439561 TUBGCP5Q96RT8 1024 aa9.48□□□□□ -0.89
COPB1-202ENST00000439561 FIZ1Q96SL8 496 aa9.48□□□□□ -0.89
COPB1-202ENST00000439561 EPAS1Q99814 870 aa9.48□□□□□ -0.89
COPB1-202ENST00000439561 MXRA8Q9BRK3 442 aa9.48□□□□□ -0.89
COPB1-202ENST00000439561 GABBR1Q9UBS5 961 aa9.48□□□□□ -0.89
COPB1-202ENST00000439561 ADAMTSL3P82987 1691 aa9.48□□□□□ -0.89
COPB1-202ENST00000439561 CFLARO15519 480 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 MTA2O94776 668 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 ABHD2P08910 425 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 RBP3P10745 1247 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 FGFR1P11362 822 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 SLC25A3Q00325 362 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 CYP24A1Q07973 514 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 EMC1Q8N766 993 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 RBM15BQ8NDT2 890 aaKnown RBP9.47□□□□□ -0.89
COPB1-202ENST00000439561 GSTCDQ8NEC7 633 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 NRG4Q8WWG1 115 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 MKL1Q969V6 931 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 NDNQ99608 321 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 RAB6BQ9NRW1 208 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 TXNDC16Q9P2K2 825 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 ZNF212Q9UDV6 495 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 MAGED2Q9UNF1 606 aaPredicted RBP9.47□□□□□ -0.89
COPB1-202ENST00000439561 KBTBD13C9JR72 458 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 TCEA3O75764 348 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 RNF8O76064 485 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 TFAMQ00059 246 aaKnown RBP9.47□□□□□ -0.89
COPB1-202ENST00000439561 ORC1Q13415 861 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 UBAP2LQ14157 1087 aaKnown RBP9.47□□□□□ -0.89
COPB1-202ENST00000439561 PPP2R5DQ14738 602 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 TFDP3Q5H9I0 405 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 TCHHL1Q5QJ38 904 aaPredicted RBP9.47□□□□□ -0.89
COPB1-202ENST00000439561 FNBP1LQ5T0N5 605 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 ARHGEF16Q5VV41 709 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 LPCAT4Q643R3 524 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 PCGF5Q86SE9 256 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 KATNAL2Q8IYT4 538 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 NDUFAF2Q8N183 169 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 NME8Q8N427 588 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 ENDOVQ8N8Q3 282 aaKnown RBP9.47□□□□□ -0.89
COPB1-202ENST00000439561 PHC3Q8NDX5 983 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 SNRNP27Q8WVK2 155 aaKnown RBP9.47□□□□□ -0.89
COPB1-202ENST00000439561 ALKBH8Q96BT7 664 aaKnown RBP9.47□□□□□ -0.89
COPB1-202ENST00000439561 ZNF668Q96K58 619 aaPredicted RBP9.47□□□□□ -0.89
COPB1-202ENST00000439561 ASCC2Q9H1I8 757 aaPredicted RBP9.47□□□□□ -0.89
COPB1-202ENST00000439561 RAVER2Q9HCJ3 691 aaKnown RBP9.47□□□□□ -0.89
COPB1-202ENST00000439561 DDX18Q9NVP1 670 aaKnown RBP9.47□□□□□ -0.89
COPB1-202ENST00000439561 RBAKQ9NYW8 714 aaPredicted RBP9.47□□□□□ -0.89
COPB1-202ENST00000439561 STX18Q9P2W9 335 aaKnown RBP9.47□□□□□ -0.89
COPB1-202ENST00000439561 CNTNAP4Q9C0A0 1308 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 TP73O15350 636 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 AVILO75366 819 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 APRTP07741 180 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 ITGB5P18084 799 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 KRT81Q14533 505 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 C11orf91Q3C1V1 193 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 C1orf220Q5T0J3 134 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 TXNRD3NBQ6F5E7 133 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 ENOSF1Q7L5Y1 443 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 TMPRSS6Q8IU80 811 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 WDR75Q8IWA0 830 aaKnown RBP9.47□□□□□ -0.89
COPB1-202ENST00000439561 ALLCQ8N6M5 410 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 IL31RAQ8NI17 732 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 MIPOL1Q8TD10 442 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 SLCO2A1Q92959 643 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 OPTNQ96CV9 577 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 SLITRK1Q96PX8 696 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 SRPK1Q96SB4 655 aaKnown RBP9.47□□□□□ -0.89
COPB1-202ENST00000439561 SHOC2Q9UQ13 582 aa9.47□□□□□ -0.89
COPB1-202ENST00000439561 NFIBO00712 420 aa9.46□□□□□ -0.89
COPB1-202ENST00000439561 CYB561D2O14569 222 aa9.46□□□□□ -0.89
COPB1-202ENST00000439561 ALOX15BO15296 676 aa9.46□□□□□ -0.89
COPB1-202ENST00000439561 TM9SF1O15321 606 aa9.46□□□□□ -0.89
COPB1-202ENST00000439561 CCNFP41002 786 aa9.46□□□□□ -0.89
COPB1-202ENST00000439561 GPC3P51654 580 aa9.46□□□□□ -0.89
COPB1-202ENST00000439561 CCNG1P51959 295 aa9.46□□□□□ -0.89
COPB1-202ENST00000439561 RTP1P59025 263 aa9.46□□□□□ -0.89
COPB1-202ENST00000439561 UGCGQ16739 394 aa9.46□□□□□ -0.89
COPB1-202ENST00000439561 ANKS1BQ7Z6G8 1248 aa9.46□□□□□ -0.89
COPB1-202ENST00000439561 ARHGAP18Q8N392 663 aa9.46□□□□□ -0.89
COPB1-202ENST00000439561 TMEM35BQ8NCS4 154 aa9.46□□□□□ -0.89
COPB1-202ENST00000439561 SPATA18Q8TC71 538 aa9.46□□□□□ -0.89
COPB1-202ENST00000439561 DENND1AQ8TEH3 1009 aa9.46□□□□□ -0.89
COPB1-202ENST00000439561 PPP4R1Q8TF05 950 aa9.46□□□□□ -0.89
COPB1-202ENST00000439561 OLFM3Q96PB7 478 aa9.46□□□□□ -0.89
COPB1-202ENST00000439561 TRAPPC9Q96Q05 1148 aa9.46□□□□□ -0.89
COPB1-202ENST00000439561 ECSITQ9BQ95 431 aa9.46□□□□□ -0.89
COPB1-202ENST00000439561 MSTO1Q9BUK6 570 aa9.46□□□□□ -0.89
COPB1-202ENST00000439561 AVENQ9NQS1 362 aaPredicted RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms