RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 ATXN7L3BQ96GX2 97 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 KCND2Q9NZV8 630 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 COX16Q9P0S2 106 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 ZNF711Q9Y462 761 aa10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 COL22A1Q8NFW1 1626 aaPredicted RBP10.43□□□□□ -0.74
CDC42SE1-202ENST00000439374 DGAT1O75907 488 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 FAM155BO75949 473 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 GGPS1O95749 300 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 TOP3BO95985 862 aaKnown RBP10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 MYL2P10916 166 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 SFNP31947 248 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 HSD17B4P51659 736 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 TAS2R40P59535 323 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 GTF2BQ00403 316 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 PDE1CQ14123 709 aaPredicted RBP10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 STXBP2Q15833 593 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 LPCAT4Q643R3 524 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 DCAF15Q66K64 600 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 UTS2BQ765I0 119 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 SLFN11Q7Z7L1 901 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 ARID3BQ8IVW6 561 aaPredicted RBP10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 MCPH1Q8NEM0 835 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 HELQQ8TDG4 1101 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 TCP10LQ8TDR4 215 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 KIAA1586Q9HCI6 787 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 GTF3C4Q9UKN8 822 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 PDE4DIPQ5VU43 2346 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 NRAPQ86VF7 1730 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 TTLL13PA6NNM8 815 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 F8VP50 259 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 SORBS2O94875 1100 aaKnown RBP10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 FGFR1P11362 822 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 HOXA7P31268 230 aaPredicted RBP10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 MYL6P60660 151 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 MCL1Q07820 350 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 TMEM62Q0P6H9 643 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 ZRSR2Q15696 482 aaKnown RBP10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 SLC39A4Q6P5W5 647 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 LRRC74BQ6ZQY2 392 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 PRPF31Q8WWY3 499 aaKnown RBP10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 LPAR1Q92633 364 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 TRIM56Q9BRZ2 755 aaKnown RBP10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 MAK16Q9BXY0 300 aaKnown RBP10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 OSBPL8Q9BZF1 889 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 ACAD9Q9H845 621 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 DNPEPQ9ULA0 475 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 NUMBLQ9Y6R0 609 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 PEX1O43933 1283 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 TOM1L1O75674 476 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 ATP6V1C1P21283 382 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 SP2Q02086 613 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 WDR72Q3MJ13 1102 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 TDRD10Q5VZ19 366 aaKnown RBP10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 CWF19L1Q69YN2 538 aaKnown RBP10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 VSIG10LQ86VR7 867 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 HACE1Q8IYU2 909 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 FBXO41Q8TF61 875 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 PYROXD1Q8WU10 500 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 ZNF516Q92618 1163 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 MAGEB18Q96M61 343 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 MIPEPQ99797 713 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 TEX13BQ9BXU2 312 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 CADM1Q9BY67 442 aaKnown RBP10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 ANLNQ9NQW6 1124 aa10.42□□□□□ -0.74
CDC42SE1-202ENST00000439374 CST3P01034 146 aaPredicted RBP10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 STAT5BP51692 787 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 MRPS35P82673 323 aaKnown RBP10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 TMPRSS15P98073 1019 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 PLEKHG4Q58EX7 1191 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 RINLQ6ZS11 566 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 SESTD1Q86VW0 696 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 SULF1Q8IWU6 871 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 ZC3H3Q8IXZ2 948 aaKnown RBP10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 PPM1NQ8N819 430 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 MAIP1Q8WWC4 291 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 NRG4Q8WWG1 115 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 SHC3Q92529 594 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 COPS5Q92905 334 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 AS3MTQ9HBK9 375 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 XPNPEP1Q9NQW7 623 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 PCMTD2Q9NV79 361 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 NOCTQ9UK39 431 aaKnown RBP10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 NUB1Q9Y5A7 615 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 MAD1L1Q9Y6D9 718 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 CFLARO15519 480 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 DCTN3O75935 186 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 SPATA31D3P0C874 917 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 TCN1P20061 433 aaPredicted RBP10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 DSG3P32926 999 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 GMPRP36959 345 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 VHLP40337 213 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 BAG6P46379 1132 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 TCHHL1Q5QJ38 904 aaPredicted RBP10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 SPATA31D4Q6ZUB0 917 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 RASSF3Q86WH2 238 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 MCOLN2Q8IZK6 566 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 CCDC89Q8N998 374 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 ZNF75CPQ92670 426 aaPredicted RBP10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 PTPRN2Q92932 1015 aa10.41□□□□□ -0.74
CDC42SE1-202ENST00000439374 ART4Q93070 314 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms