RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 TRPC3Q13507 836 aa14.81□□□□□ -0.04
PRAME-209ENST00000439106 PNOCQ13519 176 aa14.81□□□□□ -0.04
PRAME-209ENST00000439106 ARHGAP15Q53QZ3 475 aa14.81□□□□□ -0.04
PRAME-209ENST00000439106 TTC8Q8TAM2 541 aa14.81□□□□□ -0.04
PRAME-209ENST00000439106 GOLGA5Q8TBA6 731 aa14.81□□□□□ -0.04
PRAME-209ENST00000439106 DEPDC1BQ8WUY9 529 aa14.81□□□□□ -0.04
PRAME-209ENST00000439106 DNASE1L2Q92874 299 aa14.81□□□□□ -0.04
PRAME-209ENST00000439106 ERCC4Q92889 916 aaPredicted RBP14.81□□□□□ -0.04
PRAME-209ENST00000439106 SHDQ96IW2 340 aa14.81□□□□□ -0.04
PRAME-209ENST00000439106 GCNAQ96QF7 691 aa14.81□□□□□ -0.04
PRAME-209ENST00000439106 GPR88Q9GZN0 384 aa14.81□□□□□ -0.04
PRAME-209ENST00000439106 XYLT2Q9H1B5 865 aa14.81□□□□□ -0.04
PRAME-209ENST00000439106 TRPV4Q9HBA0 871 aa14.81□□□□□ -0.04
PRAME-209ENST00000439106 NDRG2Q9UN36 371 aaKnown RBP14.81□□□□□ -0.04
PRAME-209ENST00000439106 KIAA1549LQ6ZVL6 1849 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 FAM170BA6NMN3 283 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 SLC38A8A6NNN8 435 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 PDXKO00764 312 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 ZNF263O14978 683 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 VNN1O95497 513 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 F11P03951 625 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 CDC25CP30307 473 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 NLRP12P59046 1061 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 TNNC1P63316 161 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 MDH1BQ5I0G3 518 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 TXNDC8Q6A555 127 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 FAM171BQ6P995 826 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 DPH6Q7L8W6 267 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 FRMD5Q7Z6J6 570 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 MFSD6LQ8IWD5 586 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 MAB21L3Q8N8X9 362 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 OR6B3Q8NGW1 331 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 SPATA18Q8TC71 538 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 IRF7Q92985 503 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 SLC46A2Q9BY10 475 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 TASP1Q9H6P5 420 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 SMYD3Q9H7B4 428 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.8□□□□□ -0.043e-8■■■■■ 50.7
PRAME-209ENST00000439106 CDH9Q9ULB4 789 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 CCL26Q9Y258 94 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 PIAS3Q9Y6X2 628 aa14.8□□□□□ -0.04
PRAME-209ENST00000439106 ARNTLO00327 626 aa14.79□□□□□ -0.04
PRAME-209ENST00000439106 DPYSL4O14531 572 aa14.79□□□□□ -0.04
PRAME-209ENST00000439106 FGF19O95750 216 aa14.79□□□□□ -0.04
PRAME-209ENST00000439106 C4BPAP04003 597 aaKnown RBP14.79□□□□□ -0.04
PRAME-209ENST00000439106 TRIM49P0CI25 452 aa14.79□□□□□ -0.04
PRAME-209ENST00000439106 TRIM49CP0CI26 452 aa14.79□□□□□ -0.04
PRAME-209ENST00000439106 CSH1P0DML2 217 aa14.79□□□□□ -0.04
PRAME-209ENST00000439106 CSH2P0DML3 217 aa14.79□□□□□ -0.04
PRAME-209ENST00000439106 BDNFP23560 247 aa14.79□□□□□ -0.04
PRAME-209ENST00000439106 CDH8P55286 799 aa14.79□□□□□ -0.04
PRAME-209ENST00000439106 ZNF699Q32M78 642 aa14.79□□□□□ -0.04
PRAME-209ENST00000439106 CFAP221Q4G0U5 840 aa14.79□□□□□ -0.04
PRAME-209ENST00000439106 C1orf220Q5T0J3 134 aa14.79□□□□□ -0.04
PRAME-209ENST00000439106 SLC9A9Q8IVB4 645 aa14.79□□□□□ -0.04
PRAME-209ENST00000439106 YAF2Q8IY57 180 aa14.79□□□□□ -0.04
PRAME-209ENST00000439106 FMR1NBQ8N0W7 255 aaPredicted RBP14.79□□□□□ -0.04
PRAME-209ENST00000439106 CCDC47Q96A33 483 aaKnown RBP14.79□□□□□ -0.04
PRAME-209ENST00000439106 EEF2KMTQ96G04 330 aa14.79□□□□□ -0.04
PRAME-209ENST00000439106 PCED1BQ96HM7 432 aa14.79□□□□□ -0.04
PRAME-209ENST00000439106 SDCBP2Q9H190 292 aa14.79□□□□□ -0.04
PRAME-209ENST00000439106 SNX25Q9H3E2 840 aa14.79□□□□□ -0.04
PRAME-209ENST00000439106 ABCB6Q9NP58 842 aa14.79□□□□□ -0.04
PRAME-209ENST00000439106 TMEM30AQ9NV96 361 aa14.79□□□□□ -0.04
PRAME-209ENST00000439106 MAGEC2Q9UBF1 373 aaPredicted RBP14.79□□□□□ -0.04
PRAME-209ENST00000439106 CALUO43852 315 aaPredicted RBP14.78□□□□□ -0.04
PRAME-209ENST00000439106 TACC1O75410 805 aa14.78□□□□□ -0.04
PRAME-209ENST00000439106 AKAP3O75969 853 aa14.78□□□□□ -0.04
PRAME-209ENST00000439106 NOL4O94818 638 aa14.78□□□□□ -0.04
PRAME-209ENST00000439106 NR2F2P24468 414 aa14.78□□□□□ -0.04
PRAME-209ENST00000439106 GNL1P36915 607 aaPredicted RBP14.78□□□□□ -0.04
PRAME-209ENST00000439106 CACNA2D1P54289 1103 aa14.78□□□□□ -0.04
PRAME-209ENST00000439106 RPL10AP62906 217 aaKnown RBP14.78□□□□□ -0.04
PRAME-209ENST00000439106 NUCB2P80303 420 aa14.78□□□□□ -0.04
PRAME-209ENST00000439106 TNK2Q07912 1038 aa14.78□□□□□ -0.04
PRAME-209ENST00000439106 FCHO2Q0JRZ9 810 aa14.78□□□□□ -0.04
PRAME-209ENST00000439106 ORC1Q13415 861 aa14.78□□□□□ -0.04
PRAME-209ENST00000439106 NCOA4Q13772 614 aa14.78□□□□□ -0.04
PRAME-209ENST00000439106 SPOPLQ6IQ16 392 aa14.78□□□□□ -0.04
PRAME-209ENST00000439106 C4orf50Q6ZRC1 276 aa14.78□□□□□ -0.04
PRAME-209ENST00000439106 TTC16Q8NEE8 873 aa14.78□□□□□ -0.04
PRAME-209ENST00000439106 RIN3Q8TB24 985 aa14.78□□□□□ -0.04
PRAME-209ENST00000439106 SYAP1Q96A49 352 aaPredicted RBP14.78□□□□□ -0.04
PRAME-209ENST00000439106 FUBP3Q96I24 572 aaKnown RBP eCLIP14.78□□□□□ -0.04
PRAME-209ENST00000439106 MMRN2Q9H8L6 949 aa14.78□□□□□ -0.04
PRAME-209ENST00000439106 TRPC7Q9HCX4 862 aa14.78□□□□□ -0.04
PRAME-209ENST00000439106 GTSE1Q9NYZ3 720 aa14.78□□□□□ -0.04
PRAME-209ENST00000439106 TRAF3IP3Q9Y228 551 aa14.78□□□□□ -0.04
PRAME-209ENST00000439106 R4GN57 208 aa14.78□□□□□ -0.04
PRAME-209ENST00000439106 EP300Q09472 2414 aaPredicted RBP14.78□□□□□ -0.04
PRAME-209ENST00000439106 GOLGA6L4A6NEF3 574 aa14.77□□□□□ -0.05
PRAME-209ENST00000439106 A8MXQ7 604 aa14.77□□□□□ -0.05
PRAME-209ENST00000439106 CLDN5O00501 218 aa14.77□□□□□ -0.05
PRAME-209ENST00000439106 GFRA3O60609 400 aa14.77□□□□□ -0.05
PRAME-209ENST00000439106 STAU1O95793 577 aaKnown RBP14.77□□□□□ -0.05
PRAME-209ENST00000439106 CCNE1P24864 410 aa14.77□□□□□ -0.05
PRAME-209ENST00000439106 GRIK1P39086 918 aa14.77□□□□□ -0.05
PRAME-209ENST00000439106 NBL1P41271 181 aa14.77□□□□□ -0.05
PRAME-209ENST00000439106 USP46P62068 366 aa14.77□□□□□ -0.05
PRAME-209ENST00000439106 CLDN10P78369 228 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms