RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 MCCD1P59942 119 aaPredicted RBP26.39■■□□□ 1.82
RAPGEF1-206ENST00000438647 GPC5P78333 572 aa26.39■■□□□ 1.82
RAPGEF1-206ENST00000438647 PPP3CAQ08209 521 aa26.39■■□□□ 1.82
RAPGEF1-206ENST00000438647 DDR2Q16832 855 aa26.39■■□□□ 1.82
RAPGEF1-206ENST00000438647 CCDC142Q17RM4 750 aa26.39■■□□□ 1.82
RAPGEF1-206ENST00000438647 KRT39Q6A163 491 aa26.39■■□□□ 1.82
RAPGEF1-206ENST00000438647 ANKRD40Q6AI12 368 aa26.39■■□□□ 1.82
RAPGEF1-206ENST00000438647 ISM2Q6H9L7 571 aa26.39■■□□□ 1.82
RAPGEF1-206ENST00000438647 SCARA5Q6ZMJ2 495 aa26.39■■□□□ 1.82
RAPGEF1-206ENST00000438647 ZC3H3Q8IXZ2 948 aaKnown RBP26.39■■□□□ 1.82
RAPGEF1-206ENST00000438647 PCED1BQ96HM7 432 aa26.39■■□□□ 1.82
RAPGEF1-206ENST00000438647 CEP295NLQ96MC4 621 aa26.39■■□□□ 1.82
RAPGEF1-206ENST00000438647 PRRX2Q99811 253 aa26.39■■□□□ 1.82
RAPGEF1-206ENST00000438647 ARHGEF3Q9NR81 526 aa26.39■■□□□ 1.82
RAPGEF1-206ENST00000438647 ZNF318Q5VUA4 2279 aa26.39■■□□□ 1.81
RAPGEF1-206ENST00000438647 PTPN1P18031 435 aaKnown RBP26.38■■□□□ 1.81
RAPGEF1-206ENST00000438647 RFX1P22670 979 aa26.38■■□□□ 1.81
RAPGEF1-206ENST00000438647 AVPR2P30518 371 aa26.38■■□□□ 1.81
RAPGEF1-206ENST00000438647 GPR15P49685 360 aa26.38■■□□□ 1.81
RAPGEF1-206ENST00000438647 CLCN5P51795 746 aa26.38■■□□□ 1.81
RAPGEF1-206ENST00000438647 MDH1BQ5I0G3 518 aa26.38■■□□□ 1.81
RAPGEF1-206ENST00000438647 SCN4BQ8IWT1 228 aa26.38■■□□□ 1.81
RAPGEF1-206ENST00000438647 B3GALNT2Q8NCR0 500 aa26.38■■□□□ 1.81
RAPGEF1-206ENST00000438647 FLCNQ8NFG4 579 aa26.38■■□□□ 1.81
RAPGEF1-206ENST00000438647 DEPDC1BQ8WUY9 529 aa26.38■■□□□ 1.81
RAPGEF1-206ENST00000438647 TNIP3Q96KP6 325 aa26.38■■□□□ 1.81
RAPGEF1-206ENST00000438647 MMRN2Q9H8L6 949 aa26.38■■□□□ 1.81
RAPGEF1-206ENST00000438647 IL21Q9HBE4 155 aa26.38■■□□□ 1.81
RAPGEF1-206ENST00000438647 CA14Q9ULX7 337 aa26.38■■□□□ 1.81
RAPGEF1-206ENST00000438647 HMGA1P17096 107 aaKnown RBP26.37■■□□□ 1.81
RAPGEF1-206ENST00000438647 BDNFP23560 247 aa26.37■■□□□ 1.81
RAPGEF1-206ENST00000438647 MXI1P50539 228 aa26.37■■□□□ 1.81
RAPGEF1-206ENST00000438647 PMS1P54277 932 aaKnown RBP26.37■■□□□ 1.81
RAPGEF1-206ENST00000438647 CDH8P55286 799 aa26.37■■□□□ 1.81
RAPGEF1-206ENST00000438647 MORC3Q14149 939 aa26.37■■□□□ 1.81
RAPGEF1-206ENST00000438647 GPR158Q5T848 1215 aa26.37■■□□□ 1.81
RAPGEF1-206ENST00000438647 ASTLQ6HA08 431 aaPredicted RBP26.37■■□□□ 1.81
RAPGEF1-206ENST00000438647 TAS1R2Q8TE23 839 aa26.37■■□□□ 1.81
RAPGEF1-206ENST00000438647 TRMT2BQ96GJ1 504 aaKnown RBP26.37■■□□□ 1.81
RAPGEF1-206ENST00000438647 SHDQ96IW2 340 aa26.37■■□□□ 1.81
RAPGEF1-206ENST00000438647 TASP1Q9H6P5 420 aa26.37■■□□□ 1.81
RAPGEF1-206ENST00000438647 MAGED2Q9UNF1 606 aaPredicted RBP26.37■■□□□ 1.81
RAPGEF1-206ENST00000438647 NME7Q9Y5B8 376 aa26.37■■□□□ 1.81
RAPGEF1-206ENST00000438647 TRIM49BA6NDI0 452 aa26.36■■□□□ 1.81
RAPGEF1-206ENST00000438647 TRIM66O15016 1216 aa26.36■■□□□ 1.81
RAPGEF1-206ENST00000438647 NOL4O94818 638 aa26.36■■□□□ 1.81
RAPGEF1-206ENST00000438647 TRIM21P19474 475 aaKnown RBP26.36■■□□□ 1.81
RAPGEF1-206ENST00000438647 DDX6P26196 483 aaKnown RBP eCLIP26.36■■□□□ 1.816e-6■■■■■ 31.2
RAPGEF1-206ENST00000438647 ANXA13P27216 316 aa26.36■■□□□ 1.81
RAPGEF1-206ENST00000438647 GRIK1P39086 918 aa26.36■■□□□ 1.81
RAPGEF1-206ENST00000438647 NUBP1P53384 320 aa26.36■■□□□ 1.81
RAPGEF1-206ENST00000438647 NOP14P78316 857 aaKnown RBP26.36■■□□□ 1.81
RAPGEF1-206ENST00000438647 SDHAF4Q5VUM1 108 aa26.36■■□□□ 1.81
RAPGEF1-206ENST00000438647 FOXR2Q6PJQ5 311 aa26.36■■□□□ 1.81
RAPGEF1-206ENST00000438647 TRIML1Q8N9V2 468 aa26.36■■□□□ 1.81
RAPGEF1-206ENST00000438647 SPATA17Q96L03 361 aa26.36■■□□□ 1.81
RAPGEF1-206ENST00000438647 TRMT61BQ9BVS5 477 aaKnown RBP26.36■■□□□ 1.81
RAPGEF1-206ENST00000438647 PLA2G2FQ9BZM2 168 aa26.36■■□□□ 1.81
RAPGEF1-206ENST00000438647 ELOVL4Q9GZR5 314 aa26.36■■□□□ 1.81
RAPGEF1-206ENST00000438647 DPEP3Q9H4B8 488 aa26.36■■□□□ 1.81
RAPGEF1-206ENST00000438647 EHD2Q9NZN4 543 aa26.36■■□□□ 1.81
RAPGEF1-206ENST00000438647 BICDL2A1A5D9 508 aa26.35■■□□□ 1.81
RAPGEF1-206ENST00000438647 KRBA1A5PL33 1030 aa26.35■■□□□ 1.81
RAPGEF1-206ENST00000438647 SLC38A8A6NNN8 435 aa26.35■■□□□ 1.81
RAPGEF1-206ENST00000438647 BIN1O00499 593 aa26.35■■□□□ 1.81
RAPGEF1-206ENST00000438647 PSMC3P17980 439 aa26.35■■□□□ 1.81
RAPGEF1-206ENST00000438647 RAP1GAPP47736 663 aa26.35■■□□□ 1.81
RAPGEF1-206ENST00000438647 VCPP55072 806 aaKnown RBP26.35■■□□□ 1.81
RAPGEF1-206ENST00000438647 NLRP12P59046 1061 aa26.35■■□□□ 1.81
RAPGEF1-206ENST00000438647 CYP4F8P98187 520 aa26.35■■□□□ 1.81
RAPGEF1-206ENST00000438647 STXBP5Q5T5C0 1151 aa26.35■■□□□ 1.81
RAPGEF1-206ENST00000438647 TCERG1LQ5VWI1 586 aa26.35■■□□□ 1.81
RAPGEF1-206ENST00000438647 KLHL10Q6JEL2 608 aa26.35■■□□□ 1.81
RAPGEF1-206ENST00000438647 MYRFLQ96LU7 910 aa26.35■■□□□ 1.81
RAPGEF1-206ENST00000438647 CEP63Q96MT8 703 aa26.35■■□□□ 1.81
RAPGEF1-206ENST00000438647 ARMCX3Q9UH62 379 aaPredicted RBP26.35■■□□□ 1.81
RAPGEF1-206ENST00000438647 ATP8B3O60423 1300 aa26.35■■□□□ 1.81
RAPGEF1-206ENST00000438647 SOBPA7XYQ1 873 aa26.34■■□□□ 1.81
RAPGEF1-206ENST00000438647 STK25O00506 426 aa26.34■■□□□ 1.81
RAPGEF1-206ENST00000438647 CD44P16070 742 aaKnown RBP26.34■■□□□ 1.81
RAPGEF1-206ENST00000438647 WEE1P30291 646 aa26.34■■□□□ 1.81
RAPGEF1-206ENST00000438647 VIPR2P41587 438 aa26.34■■□□□ 1.81
RAPGEF1-206ENST00000438647 ASPAP45381 313 aa26.34■■□□□ 1.81
RAPGEF1-206ENST00000438647 DCAF17Q5H9S7 520 aaPredicted RBP26.34■■□□□ 1.81
RAPGEF1-206ENST00000438647 CWF19L1Q69YN2 538 aaKnown RBP26.34■■□□□ 1.81
RAPGEF1-206ENST00000438647 SPOPLQ6IQ16 392 aa26.34■■□□□ 1.81
RAPGEF1-206ENST00000438647 PHLDB3Q6NSJ2 640 aa26.34■■□□□ 1.81
RAPGEF1-206ENST00000438647 VITQ6UXI7 678 aa26.34■■□□□ 1.81
RAPGEF1-206ENST00000438647 UNC93AQ86WB7 457 aa26.34■■□□□ 1.81
RAPGEF1-206ENST00000438647 ARID3BQ8IVW6 561 aaPredicted RBP26.34■■□□□ 1.81
RAPGEF1-206ENST00000438647 MFSD6LQ8IWD5 586 aa26.34■■□□□ 1.81
RAPGEF1-206ENST00000438647 FBXL13Q8NEE6 735 aa26.34■■□□□ 1.81
RAPGEF1-206ENST00000438647 MRPS31Q92665 395 aaKnown RBP26.34■■□□□ 1.81
RAPGEF1-206ENST00000438647 DNASE1L2Q92874 299 aa26.34■■□□□ 1.81
RAPGEF1-206ENST00000438647 ELMO3Q96BJ8 720 aa26.34■■□□□ 1.81
RAPGEF1-206ENST00000438647 NIF3L1Q9GZT8 377 aa26.34■■□□□ 1.81
RAPGEF1-206ENST00000438647 BRD9Q9H8M2 597 aa26.34■■□□□ 1.81
RAPGEF1-206ENST00000438647 CYP3A43Q9HB55 503 aa26.34■■□□□ 1.81
RAPGEF1-206ENST00000438647 METTL14Q9HCE5 456 aaKnown RBP26.34■■□□□ 1.81
RAPGEF1-206ENST00000438647 HEPACAM2A8MVW5 462 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms