RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 SLC27A5Q9Y2P5 690 aa12.2□□□□□ -0.46
RTN4-211ENST00000438462 MED13LQ71F56 2210 aa12.19□□□□□ -0.46
RTN4-211ENST00000438462 DDX11L8A8MPP1 907 aa12.19□□□□□ -0.46
RTN4-211ENST00000438462 PLEKHA8P1O95397 391 aa12.19□□□□□ -0.46
RTN4-211ENST00000438462 HOXB2P14652 356 aa12.19□□□□□ -0.46
RTN4-211ENST00000438462 NMT1P30419 496 aaKnown RBP12.19□□□□□ -0.46
RTN4-211ENST00000438462 PTENP60484 403 aa12.19□□□□□ -0.46
RTN4-211ENST00000438462 ZNF77Q15935 545 aa12.19□□□□□ -0.46
RTN4-211ENST00000438462 ANO5Q75V66 913 aa12.19□□□□□ -0.46
RTN4-211ENST00000438462 FERMT3Q86UX7 667 aa12.19□□□□□ -0.46
RTN4-211ENST00000438462 GATAD2AQ86YP4 633 aa12.19□□□□□ -0.46
RTN4-211ENST00000438462 MMP21Q8N119 569 aa12.19□□□□□ -0.46
RTN4-211ENST00000438462 SLC6A17Q9H1V8 727 aa12.19□□□□□ -0.46
RTN4-211ENST00000438462 CNNM2Q9H8M5 875 aa12.19□□□□□ -0.46
RTN4-211ENST00000438462 EIF2B4Q9UI10 523 aaKnown RBP12.19□□□□□ -0.46
RTN4-211ENST00000438462 ZMYM5Q9UJ78 669 aa12.19□□□□□ -0.46
RTN4-211ENST00000438462 SLCO1B1Q9Y6L6 691 aa12.19□□□□□ -0.46
RTN4-211ENST00000438462 CSMD2Q7Z408 3487 aa12.19□□□□□ -0.46
RTN4-211ENST00000438462 TRIP11Q15643 1979 aa12.19□□□□□ -0.46
RTN4-211ENST00000438462 ZFC3H1O60293 1989 aaKnown RBP12.18□□□□□ -0.46
RTN4-211ENST00000438462 KAT7O95251 611 aa12.18□□□□□ -0.46
RTN4-211ENST00000438462 CD6P30203 668 aa12.18□□□□□ -0.46
RTN4-211ENST00000438462 SFNP31947 248 aa12.18□□□□□ -0.46
RTN4-211ENST00000438462 JAK3P52333 1124 aa12.18□□□□□ -0.46
RTN4-211ENST00000438462 KDSRQ06136 332 aa12.18□□□□□ -0.46
RTN4-211ENST00000438462 USP4Q13107 963 aa12.18□□□□□ -0.46
RTN4-211ENST00000438462 ZNF268Q14587 947 aaPredicted RBP12.18□□□□□ -0.46
RTN4-211ENST00000438462 SGO2Q562F6 1265 aa12.18□□□□□ -0.46
RTN4-211ENST00000438462 TXNDC8Q6A555 127 aa12.18□□□□□ -0.46
RTN4-211ENST00000438462 LAYNQ6UX15 382 aa12.18□□□□□ -0.46
RTN4-211ENST00000438462 USP53Q70EK8 1073 aa12.18□□□□□ -0.46
RTN4-211ENST00000438462 KRI1Q8N9T8 703 aaKnown RBP12.18□□□□□ -0.46
RTN4-211ENST00000438462 PPP1R10Q96QC0 940 aaKnown RBP12.18□□□□□ -0.46
RTN4-211ENST00000438462 GPR174Q9BXC1 333 aa12.18□□□□□ -0.46
RTN4-211ENST00000438462 UNC45AQ9H3U1 944 aa12.18□□□□□ -0.46
RTN4-211ENST00000438462 RIC8AQ9NPQ8 531 aa12.18□□□□□ -0.46
RTN4-211ENST00000438462 MYO18AQ92614 2054 aaKnown RBP12.17□□□□□ -0.46
RTN4-211ENST00000438462 SPG11Q96JI7 2443 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 A0A1B0GUA9 196 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 A0A1W2PQF6 199 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 WIPF3A6NGB9 483 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 PAPSS1O43252 624 aaPredicted RBP12.17□□□□□ -0.46
RTN4-211ENST00000438462 EFSO43281 561 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 NFATC1O95644 943 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 MT-CO3P00414 261 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 APODP05090 189 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 CALM1P0DP23 149 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 CALM2P0DP24 149 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 CALM3P0DP25 149 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 TNFSF9P41273 254 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 WASP42768 502 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 SLC6A11P48066 632 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 AFF3P51826 1226 aaKnown RBP12.17□□□□□ -0.46
RTN4-211ENST00000438462 NPEPPSP55786 919 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 SKOR1P84550 965 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 CLN3Q13286 438 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 NMIQ13287 307 aaPredicted RBP12.17□□□□□ -0.46
RTN4-211ENST00000438462 AP3B2Q13367 1082 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 PRR16Q569H4 304 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 CATIPQ7Z7H3 387 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 SRBD1Q8N5C6 995 aaKnown RBP12.17□□□□□ -0.46
RTN4-211ENST00000438462 ZNF579Q8NAF0 562 aaKnown RBP12.17□□□□□ -0.46
RTN4-211ENST00000438462 CTCFLQ8NI51 663 aaPredicted RBP12.17□□□□□ -0.46
RTN4-211ENST00000438462 C1orf216Q8TAB5 229 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 PANK1Q8TE04 598 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 TOE1Q96GM8 510 aaKnown RBP12.17□□□□□ -0.46
RTN4-211ENST00000438462 CCNL2Q96S94 520 aaPredicted RBP12.17□□□□□ -0.46
RTN4-211ENST00000438462 REPIN1Q9BWE0 567 aaKnown RBP12.17□□□□□ -0.46
RTN4-211ENST00000438462 POLR1BQ9H9Y6 1135 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 WDR70Q9NW82 654 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 DKK3Q9UBP4 350 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 ADAMTS1Q9UHI8 967 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 ANKRD6Q9Y2G4 727 aa12.17□□□□□ -0.46
RTN4-211ENST00000438462 MTORP42345 2549 aa12.16□□□□□ -0.46
RTN4-211ENST00000438462 BTBD18B2RXH4 712 aa12.16□□□□□ -0.46
RTN4-211ENST00000438462 LAD1O00515 517 aa12.16□□□□□ -0.46
RTN4-211ENST00000438462 PODXLO00592 558 aa12.16□□□□□ -0.46
RTN4-211ENST00000438462 IFIT3O14879 490 aaKnown RBP12.16□□□□□ -0.46
RTN4-211ENST00000438462 ZBTB24O43167 697 aaPredicted RBP12.16□□□□□ -0.46
RTN4-211ENST00000438462 USP12O75317 370 aa12.16□□□□□ -0.46
RTN4-211ENST00000438462 DDX6P26196 483 aaKnown RBP eCLIP12.16□□□□□ -0.46
RTN4-211ENST00000438462 LSSP48449 732 aa12.16□□□□□ -0.46
RTN4-211ENST00000438462 SOX4Q06945 474 aaPredicted RBP12.16□□□□□ -0.46
RTN4-211ENST00000438462 ST3GAL1Q11201 340 aa12.16□□□□□ -0.46
RTN4-211ENST00000438462 ILKQ13418 452 aa12.16□□□□□ -0.46
RTN4-211ENST00000438462 FHL5Q5TD97 284 aa12.16□□□□□ -0.46
RTN4-211ENST00000438462 TYW1BQ6NUM6 668 aa12.16□□□□□ -0.46
RTN4-211ENST00000438462 MAMDC2Q7Z304 686 aaPredicted RBP12.16□□□□□ -0.46
RTN4-211ENST00000438462 TMEM150AQ86TG1 271 aa12.16□□□□□ -0.46
RTN4-211ENST00000438462 ATCAYQ86WG3 371 aa12.16□□□□□ -0.46
RTN4-211ENST00000438462 OTUD7AQ8TE49 926 aaPredicted RBP12.16□□□□□ -0.46
RTN4-211ENST00000438462 CRYGNQ8WXF5 182 aa12.16□□□□□ -0.46
RTN4-211ENST00000438462 MIB2Q96AX9 1013 aa12.16□□□□□ -0.46
RTN4-211ENST00000438462 SGF29Q96ES7 293 aa12.16□□□□□ -0.46
RTN4-211ENST00000438462 CCDC97Q96F63 343 aaPredicted RBP12.16□□□□□ -0.46
RTN4-211ENST00000438462 PNKPQ96T60 521 aa12.16□□□□□ -0.46
RTN4-211ENST00000438462 LINC00597Q9H2U6 94 aa12.16□□□□□ -0.46
RTN4-211ENST00000438462 DHX33Q9H6R0 707 aaKnown RBP12.16□□□□□ -0.46
RTN4-211ENST00000438462 GEMIN8Q9NWZ8 242 aaKnown RBP12.16□□□□□ -0.46
RTN4-211ENST00000438462 PCSK5Q92824 1860 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms